Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B09
(409 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 232 2e-60
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 209 2e-53
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 202 3e-51
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 192 2e-48
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 186 2e-46
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 183 1e-45
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 170 8e-42
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 166 1e-40
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 166 1e-40
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 165 3e-40
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 164 5e-40
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 157 1e-37
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 153 2e-36
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 132 2e-30
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 124 5e-28
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 124 9e-28
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 120 9e-27
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 117 8e-26
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 117 1e-25
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 116 2e-25
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 115 4e-25
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 107 8e-23
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 107 8e-23
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 107 8e-23
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 106 2e-22
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 105 5e-22
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 103 1e-21
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 94 8e-19
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 93 2e-18
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 92 3e-18
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 89 3e-17
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 81 6e-15
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 71 9e-12
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 63 2e-09
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 57 1e-07
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 54 1e-06
UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|R... 54 1e-06
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 54 1e-06
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 51 1e-05
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 50 1e-05
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 48 6e-05
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 47 1e-04
UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2; Mycoplas... 47 2e-04
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 46 3e-04
UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Re... 46 4e-04
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 46 4e-04
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 45 5e-04
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 44 9e-04
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 44 9e-04
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 44 9e-04
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 44 0.001
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 44 0.002
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 43 0.002
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 43 0.003
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 43 0.003
UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep... 42 0.004
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.005
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 42 0.006
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 41 0.008
UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein... 41 0.011
UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3; Deltapro... 41 0.011
UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirell... 40 0.019
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 39 0.045
UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 39 0.045
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 39 0.045
UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60; Bacteri... 39 0.045
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.059
UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit... 38 0.059
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.078
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 37 0.14
UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330; Bacter... 37 0.18
UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Re... 36 0.24
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 0.24
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.24
UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n... 36 0.24
UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 36 0.31
UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal pro... 36 0.31
UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11; Proteobacte... 35 0.55
UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep... 35 0.55
UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus R... 35 0.55
UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1... 35 0.73
UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1; Chaetosphaer... 35 0.73
UniRef50_Q0U871 Cluster: Putative uncharacterized protein; n=2; ... 34 0.96
UniRef50_Q6NR54 Cluster: RE72153p; n=2; Drosophila melanogaster|... 34 1.3
UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95; Bacteri... 34 1.3
UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2; n... 34 1.3
UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1; ... 33 1.7
UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_A6R797 Cluster: Putative uncharacterized protein; n=1; ... 33 1.7
UniRef50_Q5KI10 Cluster: Ribosomal protein, putative; n=1; Filob... 33 2.2
UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep... 33 2.9
UniRef50_P46741 Cluster: Mitochondrial ribosomal protein S2; n=1... 33 2.9
UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=3... 33 2.9
UniRef50_UPI00004488FF Cluster: UPI00004488FF related cluster; n... 32 3.9
UniRef50_Q5QUB7 Cluster: Competence/damage-inducible protein; n=... 32 3.9
UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole gen... 32 3.9
UniRef50_A7AMH6 Cluster: Putative uncharacterized protein; n=1; ... 32 3.9
UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster... 32 5.1
UniRef50_Q86NF9 Cluster: VAB-10A protein; n=8; Caenorhabditis|Re... 32 5.1
UniRef50_Q5A398 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_Q47RW4 Cluster: Putative cytochrome D ubiquinol oxidase... 31 6.8
UniRef50_Q1V2V1 Cluster: Probable 30S ribosomal protein S2; n=2;... 31 6.8
UniRef50_A7QRU7 Cluster: Chromosome chr13 scaffold_152, whole ge... 31 6.8
UniRef50_Q4XEA3 Cluster: Cyclin related protein, putative; n=6; ... 31 6.8
UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellula... 31 6.8
UniRef50_UPI0001509CD4 Cluster: hypothetical protein TTHERM_0057... 31 8.9
UniRef50_Q6A775 Cluster: Binding-protein-dependent transport sys... 31 8.9
UniRef50_Q02AL1 Cluster: Ribosomal protein S2; n=1; Solibacter u... 31 8.9
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 232 bits (567), Expect = 2e-60
Identities = 105/136 (77%), Positives = 120/136 (88%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A A+VA+E+PADV VISSR GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
LL+V DP DHQP+TEASYVN+P IALCNTDSPLR+VDIAIPC+ K +HS+GLMWW+LAR
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAR 180
Query: 361 EVLRLRGVLSRDQRWD 408
EVLR+RG +SR+ W+
Sbjct: 181 EVLRMRGTISREHPWE 196
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 209 bits (510), Expect = 2e-53
Identities = 92/136 (67%), Positives = 113/136 (83%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A + A+E+PADV V++++ FGQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPR
Sbjct: 61 AARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPR 120
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
LLIV D DHQPITEA+YVNIPVIA CNT+SPLR++D+AIPC+ +S+GLMWW+L R
Sbjct: 121 LLIVSDARSDHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCR 180
Query: 361 EVLRLRGVLSRDQRWD 408
EVLRLRG +SR+ W+
Sbjct: 181 EVLRLRGTISRELPWE 196
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 202 bits (492), Expect = 3e-51
Identities = 93/136 (68%), Positives = 110/136 (80%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A A+ A+E+ ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPR
Sbjct: 141 AARAIAAIENLADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPR 200
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
L +V DP DHQP+ EASYVN+P IALCNTDSPL +VDIAIPC+ K +HS+G+MWW+L
Sbjct: 201 LPVVTDPRVDHQPLMEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGVMWWMLVP 260
Query: 361 EVLRLRGVLSRDQRWD 408
EV R+ G +SR+ W+
Sbjct: 261 EVRRISGTISREHPWE 276
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 192 bits (468), Expect = 2e-48
Identities = 91/132 (68%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Frame = +1
Query: 13 VVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 192
+ A+ +P DV ISSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV
Sbjct: 64 IAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIV 123
Query: 193 LDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLR 372
DP D Q I EASYVNIPVIAL + DSP FVD+AIPC+ + HSIGL+W++LAREVLR
Sbjct: 124 TDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLR 183
Query: 373 LRGVL-SRDQRW 405
LRG L R Q W
Sbjct: 184 LRGALVDRTQPW 195
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 186 bits (452), Expect = 2e-46
Identities = 88/136 (64%), Positives = 104/136 (76%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A + +E+PADV V+S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I +REPR
Sbjct: 63 AARVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPR 122
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
L++V DP D Q I EAS+VNIPVIALC+TDS L VDIAIP + K SIGL+W++LAR
Sbjct: 123 LIVVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIWYLLAR 182
Query: 361 EVLRLRGVLSRDQRWD 408
EVLR+RG LSR WD
Sbjct: 183 EVLRVRGTLSRSAPWD 198
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 183 bits (446), Expect = 1e-45
Identities = 81/136 (59%), Positives = 104/136 (76%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A +VA+E+P D+ V S+R +GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPR
Sbjct: 65 AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPR 124
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
LLI+ DP DHQPI E + NIP+IA C+TDSP+RFVDI IP + K HSIG ++W+LAR
Sbjct: 125 LLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLAR 184
Query: 361 EVLRLRGVLSRDQRWD 408
VL++RG ++ Q+WD
Sbjct: 185 MVLQMRGTIAAGQKWD 200
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 170 bits (414), Expect = 8e-42
Identities = 79/136 (58%), Positives = 98/136 (72%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A + AVE+P DV V S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR
Sbjct: 81 AARVIAAVENPQDVTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPR 140
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
+L+V DP D Q EAS VNIPVIA C+TD+PL FVDIAIPC+ + +SI +M+W+LAR
Sbjct: 141 VLLVTDPRTDQQAFREASLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMYWLLAR 200
Query: 361 EVLRLRGVLSRDQRWD 408
EVLRLRG + R WD
Sbjct: 201 EVLRLRGTIPRSVPWD 216
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 166 bits (404), Expect = 1e-40
Identities = 73/132 (55%), Positives = 101/132 (76%)
Frame = +1
Query: 13 VVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 192
+V ++DPA++ V+++R QRA+LKF +T AT GRF PG FTN++ + EPRLL+V
Sbjct: 70 LVTIDDPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLV 129
Query: 193 LDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLR 372
DP D Q I EASYVNIP I+LCN+D+ L+F+D+AIPC+ K+ SIGL++W+LAREVLR
Sbjct: 130 NDPVVDRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIYWLLAREVLR 189
Query: 373 LRGVLSRDQRWD 408
L+G +SR + WD
Sbjct: 190 LKGSISRTEEWD 201
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 166 bits (404), Expect = 1e-40
Identities = 78/136 (57%), Positives = 98/136 (72%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A A+V V +P +V V+S+R +G RAVLKF+ + G+ PIAGR+ PG TNQI F EPR
Sbjct: 61 AARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPR 120
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
LL+ DP D Q + E+SYV++PVIALC+TDSPL +VDIAIPC+ K SI LM+W+LAR
Sbjct: 121 LLVATDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMYWLLAR 180
Query: 361 EVLRLRGVLSRDQRWD 408
EVL LR L R WD
Sbjct: 181 EVLYLRDQLKRWMPWD 196
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 165 bits (401), Expect = 3e-40
Identities = 80/136 (58%), Positives = 96/136 (70%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A A+ A+E+PADV +I + QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPR
Sbjct: 61 AARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPR 120
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
LLIV DP DHQP+ E S VNIPVI CNTDSPL+ VDI IPC+ +SI LM W+LAR
Sbjct: 121 LLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCN-NDKYSIALMLWMLAR 179
Query: 361 EVLRLRGVLSRDQRWD 408
EV R+ G+ R Q D
Sbjct: 180 EVRRIWGLDPRSQPGD 195
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 164 bits (399), Expect = 5e-40
Identities = 76/136 (55%), Positives = 100/136 (73%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A +VAVE+P DV ++R +GQRAVLKFA +TGA +AGR TPG +TNQ A F EPR
Sbjct: 84 AARVIVAVENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPR 143
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
+L+V DP D QPI+E ++VNIP IA C+TDSPL+ VDIAIP + K+ SIG ++++LAR
Sbjct: 144 VLVVTDPRTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLYYLLAR 203
Query: 361 EVLRLRGVLSRDQRWD 408
VL++RG +S WD
Sbjct: 204 MVLQMRGTISPANPWD 219
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 157 bits (380), Expect = 1e-37
Identities = 74/131 (56%), Positives = 93/131 (70%)
Frame = +1
Query: 13 VVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 192
+ AVE+P DV IS+++FG RAV KFA GA + RFTPG FTN F EPRL+IV
Sbjct: 63 IYAVEEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIV 122
Query: 193 LDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLR 372
DP D Q + EA+Y NIP IALC+TD+ L +VD IPC+TK+ +S+GL+ W+L REVLR
Sbjct: 123 CDPNTDSQAVHEAAYANIPCIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMWLLTREVLR 182
Query: 373 LRGVLSRDQRW 405
LRG L+R Q W
Sbjct: 183 LRGALTRTQEW 193
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 153 bits (370), Expect = 2e-36
Identities = 76/140 (54%), Positives = 100/140 (71%), Gaps = 4/140 (2%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---F 168
A + A+E P DV V+SSR GQRAV+KFA +T A+ + R+TPG TNQ +A F
Sbjct: 86 AARVIAAIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKF 145
Query: 169 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWW 348
+EP+LLIV DP D Q I EASYVNIPVIAL N+D+PL++VDI IP + + SI +++W
Sbjct: 146 QEPQLLIVTDPHLDRQAIVEASYVNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIYW 205
Query: 349 VLAREVLRLRGVLSRDQRWD 408
+LAREV LRG L++D+ WD
Sbjct: 206 LLAREVKILRGELNKDEEWD 225
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 132 bits (320), Expect = 2e-30
Identities = 60/115 (52%), Positives = 78/115 (67%)
Frame = +1
Query: 64 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 243
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 244 IPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLRLRGVLSRDQRWD 408
IP IA C+ DSP+R+VDI I + K H+IG ++W+L VL +R ++ +WD
Sbjct: 93 IPTIAFCDIDSPMRYVDIDILTNNKGKHNIGCLFWLLTMMVLHMRHTIALGHKWD 147
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 124 bits (300), Expect = 5e-28
Identities = 56/136 (41%), Positives = 86/136 (63%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A A++++E P + +SS Q A++KF+ I ++ PG TN+ F EPR
Sbjct: 54 AARAIISIEHPKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPR 113
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
LLI+ DP D Q + EASYVNIPVI++CNTDS L ++DIAIP + K +S L+ W+L +
Sbjct: 114 LLIISDPLLDKQALLEASYVNIPVISVCNTDSFLSYIDIAIPGNNKDRYSFALIIWLLTK 173
Query: 361 EVLRLRGVLSRDQRWD 408
++L +G L+++ W+
Sbjct: 174 KILIFKGELTKNCEWN 189
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 124 bits (298), Expect = 9e-28
Identities = 64/126 (50%), Positives = 85/126 (67%)
Frame = +1
Query: 13 VVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 192
+VAV+ P++V VISSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++
Sbjct: 46 IVAVKHPSEVGVISSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLI 105
Query: 193 LDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLR 372
DP DH + EA YVN+ IAL N+ SPL + IAIP D+K +H++G W+LA VL
Sbjct: 106 TDPRADHPFLMEAPYVNLLTIALRNSQSPLHCMGIAIPHDSKGAHTVGRRKWLLAWGVLH 165
Query: 373 LRGVLS 390
G S
Sbjct: 166 ACGTTS 171
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 120 bits (290), Expect = 9e-27
Identities = 56/123 (45%), Positives = 78/123 (63%)
Frame = +1
Query: 13 VVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 192
++A DP+ V+S R +G R V KF G P+ GR PG FTN + F E L++V
Sbjct: 66 MIARYDPSKFVVVSGRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMV 125
Query: 193 LDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLR 372
DP D Q + EA + IPVIALC+TDSP+ VD+ IP + + ++ L++W+LAREVLR
Sbjct: 126 TDPRVDEQAVVEAGTMGIPVIALCDTDSPISNVDLIIPTNNRGRKALALIFWLLAREVLR 185
Query: 373 LRG 381
+RG
Sbjct: 186 IRG 188
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 117 bits (282), Expect = 8e-26
Identities = 50/89 (56%), Positives = 67/89 (75%)
Frame = +1
Query: 142 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP + K
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 89
Query: 322 SHSIGLMWWVLAREVLRLRGVLSRDQRWD 408
+SIG ++W+LAR VL++RG + +WD
Sbjct: 90 RNSIGCLFWLLARMVLQMRGTILPGHKWD 118
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 117 bits (281), Expect = 1e-25
Identities = 56/132 (42%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
Frame = +1
Query: 7 GAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLL 186
G ++A +P D+ V++ R + R V KFA TGAT I GRF PG TN ++E +++
Sbjct: 56 GKMLARFEPQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVI 115
Query: 187 IVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREV 366
IV DP D Q + EA + IP+IALC+ ++ FVD+ IP + K S+ +++W+LARE+
Sbjct: 116 IVTDPLADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIYWLLAREI 175
Query: 367 LRLRG-VLSRDQ 399
L+ RG + S DQ
Sbjct: 176 LKNRGTITSYDQ 187
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 116 bits (279), Expect = 2e-25
Identities = 51/123 (41%), Positives = 78/123 (63%)
Frame = +1
Query: 28 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 207
DP D+ V++SR + R V KFA G+ + GR PG FTN + + EP++L+V DP
Sbjct: 93 DPQDIIVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRT 152
Query: 208 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLRLRGVL 387
D Q I EA+ V IP++A +TD+ + ++D+ IP + K S+ L++W LAR++LR R V+
Sbjct: 153 DTQAIKEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLYWALARQILRERRVI 212
Query: 388 SRD 396
D
Sbjct: 213 PPD 215
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 115 bits (276), Expect = 4e-25
Identities = 52/99 (52%), Positives = 69/99 (69%)
Frame = +1
Query: 10 AVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLI 189
A ++ E P+DV ++ R RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+I
Sbjct: 75 AGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLII 134
Query: 190 VLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 306
V DP+ DHQ + E+ Y+N+P I N+D+ L+ V IAIP
Sbjct: 135 VSDPSVDHQALRESGYINVPTIGFWNSDNRLKNVGIAIP 173
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 107 bits (257), Expect = 8e-23
Identities = 49/85 (57%), Positives = 63/85 (74%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A +VA+E+P D+ V S+R +GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPR
Sbjct: 62 AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPR 121
Query: 181 LLIVLDPAQDHQPITEASYVNIPVI 255
LLI+ DP DHQPI E++ P++
Sbjct: 122 LLILTDPRTDHQPIKESALETSPLL 146
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 107 bits (257), Expect = 8e-23
Identities = 55/136 (40%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Frame = +1
Query: 1 ARGAVVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 180
A A ++ P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN +PR
Sbjct: 66 AARAFCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPR 125
Query: 181 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAR 360
+LIV D D Q I E+ Y N+P IA NTD+ L VDIAIP + +S +I +++L+R
Sbjct: 126 VLIVSDTYADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSR 185
Query: 361 EV--LRLRGVLSRDQR 402
+ ++ L RD +
Sbjct: 186 LINYMKTGAELVRDMK 201
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 107 bits (257), Expect = 8e-23
Identities = 51/116 (43%), Positives = 73/116 (62%)
Frame = +1
Query: 28 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 207
DPA + V+SSR +GQ F+ G + GRF PG+ TN F EP ++IV DPA
Sbjct: 94 DPARILVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTDPAG 153
Query: 208 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLRL 375
D Q + EAS + +PV+ALC+T++ VD+ IP + K ++ L++W+LAREV RL
Sbjct: 154 DAQVLKEASSIGVPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVYWLLAREVSRL 209
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 106 bits (254), Expect = 2e-22
Identities = 43/88 (48%), Positives = 67/88 (76%)
Frame = +1
Query: 115 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVD 294
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D+ L++VD
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKYVD 62
Query: 295 IAIPCDTKSSHSIGLMWWVLAREVLRLR 378
AIPC+ ++++SI ++W++L + VL ++
Sbjct: 63 CAIPCNNRNNYSIAMIWYLLTKAVLEIK 90
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 105 bits (251), Expect = 5e-22
Identities = 42/125 (33%), Positives = 74/125 (59%)
Frame = +1
Query: 28 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 207
+P D+ +S R + + +F +TG +AGRF PG TN F EP ++ + DP
Sbjct: 64 EPEDILAVSRRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRV 123
Query: 208 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLRLRGVL 387
D Q + EA+ + +P++ LC+T+ F+D+ IP + K ++ L++++L RE L+ RGV+
Sbjct: 124 DRQALKEATEIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIYYLLTREYLKNRGVI 183
Query: 388 SRDQR 402
+ D +
Sbjct: 184 TDDTK 188
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 103 bits (248), Expect = 1e-21
Identities = 51/123 (41%), Positives = 72/123 (58%)
Frame = +1
Query: 31 PADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 210
P+ V V S++ + + + F G P+ GR PG TN + LL+V DP D
Sbjct: 75 PSRVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTD 134
Query: 211 HQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLRLRGVLS 390
Q I EAS IPVIAL +TDS F+D+ IPC+ K +S+ L++W+LAR+VLR RG L
Sbjct: 135 FQAINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVFWLLARQVLRERGELK 194
Query: 391 RDQ 399
++
Sbjct: 195 PNE 197
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 94.3 bits (224), Expect = 8e-19
Identities = 40/125 (32%), Positives = 70/125 (56%)
Frame = +1
Query: 28 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 207
+P ++ V+ R + KF+ T GR+ PG TN + EP ++++ DP
Sbjct: 61 EPNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITDPIM 120
Query: 208 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLRLRGVL 387
D + +A I ++ALC+T+ ++D IP + + S S+ L++W+LARE LR RGV+
Sbjct: 121 DKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGSKSLALIYWILAREYLRNRGVI 180
Query: 388 SRDQR 402
+D++
Sbjct: 181 GKDEQ 185
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 93.1 bits (221), Expect = 2e-18
Identities = 44/118 (37%), Positives = 67/118 (56%)
Frame = +1
Query: 28 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 207
+P + SSR +G+ KFA GA GRF PG TN + EP +++V DP
Sbjct: 136 EPEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTDPIG 195
Query: 208 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLRLRG 381
D Q + EA V IPVIA+C++++ VD+ +P + K ++ +++W+LA E L RG
Sbjct: 196 DAQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRG 253
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 92.3 bits (219), Expect = 3e-18
Identities = 52/123 (42%), Positives = 74/123 (60%)
Frame = +1
Query: 13 VVAVEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 192
VV +++PA++ V+SSR + AVL FA TGA IA RFTPG+ TN + F+E R++IV
Sbjct: 38 VVTLKNPAEIPVVSSRQYDYCAVLTFAGQTGAINIADRFTPGSSTNYVTRWFKETRVIIV 97
Query: 193 LDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLR 372
+DP HQ + +A FVDIAIP + + HS+ ++W +L R VLR
Sbjct: 98 IDPHVSHQAMHKA-----------------LFVDIAIPGNVRGRHSVVILWCLLCRTVLR 140
Query: 373 LRG 381
L+G
Sbjct: 141 LKG 143
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 89.0 bits (211), Expect = 3e-17
Identities = 43/116 (37%), Positives = 67/116 (57%)
Frame = +1
Query: 34 ADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 213
+++ V S + + + KFA G I RF PG TN + EP+LL+V DP D
Sbjct: 69 SELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQVDA 128
Query: 214 QPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLRLRG 381
Q +TEA+ IPVI + N+D+ +D+ IP + + ++ ++W+LAREVL +RG
Sbjct: 129 QAVTEATNAGIPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFWLLAREVLVIRG 184
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 81.4 bits (192), Expect = 6e-15
Identities = 50/108 (46%), Positives = 60/108 (55%)
Frame = +1
Query: 46 VISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 225
V SSR GQ+AVL FAA G+ P +GRFTPG T+Q+Q P
Sbjct: 48 VTSSRTTGQQAVLSFAAAVGSAPTSGRFTPGTLTDQVQ-------------------PSL 88
Query: 226 EASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVL 369
+ YVN+P IAL + DS DIA PC+ K HS+GLM WVLA E L
Sbjct: 89 ASQYVNLPPIALYDADSSWCSADIA-PCNIKGVHSVGLMCWVLAGEAL 135
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 70.9 bits (166), Expect = 9e-12
Identities = 32/109 (29%), Positives = 60/109 (55%)
Frame = +1
Query: 46 VISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPIT 225
+I ++ ++A+ + I + PG F+N+ +F P IV +P D + I
Sbjct: 68 IIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRIIR 127
Query: 226 EASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVLAREVLR 372
E S +NIP+I +CNTD+ + F+D +P +T S S ++++++ R + R
Sbjct: 128 ELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMIFYLIGRLLKR 176
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 63.3 bits (147), Expect = 2e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +1
Query: 79 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 213
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 57.2 bits (132), Expect = 1e-07
Identities = 32/80 (40%), Positives = 45/80 (56%)
Frame = +1
Query: 142 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
F I+ + P +LI++DP D I EA +NIPVIAL NT++ + +D IP + S
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNADPQLIDYIIPVNNYS 258
Query: 322 SHSIGLMWWVLAREVLRLRG 381
SI L+ VLA + L G
Sbjct: 259 VKSITLILGVLADSIAELHG 278
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 54.0 bits (124), Expect = 1e-06
Identities = 21/28 (75%), Positives = 25/28 (89%)
Frame = +1
Query: 325 HSIGLMWWVLAREVLRLRGVLSRDQRWD 408
HSIGLMWW+L+REVLRLRG +SRD W+
Sbjct: 48 HSIGLMWWMLSREVLRLRGAISRDVTWE 75
>UniRef50_Q862Y3 Cluster: Similar to C10 protein; n=3; Eutheria|Rep:
Similar to C10 protein - Bos taurus (Bovine)
Length = 130
Score = 53.6 bits (123), Expect = 1e-06
Identities = 19/31 (61%), Positives = 27/31 (87%)
Frame = +1
Query: 316 KSSHSIGLMWWVLAREVLRLRGVLSRDQRWD 408
K +HS+GL+WW+LAREVLR+RG +SR+ W+
Sbjct: 1 KGAHSVGLIWWMLAREVLRMRGTISREHPWE 31
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 53.6 bits (123), Expect = 1e-06
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +1
Query: 142 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
F +++ R P LLIV DP + + EA+ + IPV+ALCNT++ VD IP +
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQ 221
Query: 322 SHSIGLMWWVLAREVLRLRGV 384
S L+ +LA V + +
Sbjct: 222 PQSTCLLMNLLADAVAEAKAM 242
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 50.8 bits (116), Expect = 1e-05
Identities = 24/46 (52%), Positives = 29/46 (63%)
Frame = +1
Query: 100 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 237
TGA P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 104 TGAIPTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 50.4 bits (115), Expect = 1e-05
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P +L++ DP ++ +TEA + IPVIALCNT+S + + IP + + S+ L+ +L
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLLLNLL 260
Query: 355 AREVLRLRG 381
V +G
Sbjct: 261 GDAVALAQG 269
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 48.4 bits (110), Expect = 6e-05
Identities = 25/70 (35%), Positives = 40/70 (57%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P+++I+ DP + I EA + IPVIA+CNT++ VD IP + S S+ L+ +L
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLLVGLL 322
Query: 355 AREVLRLRGV 384
V +G+
Sbjct: 323 CDAVAEAKGL 332
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 47.2 bits (107), Expect = 1e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +1
Query: 142 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+ +D IP + +
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTNVDPVPIDYIIPANDDT 207
Query: 322 SHSIGLM 342
S SI ++
Sbjct: 208 SRSIAII 214
>UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pulmonis
Length = 330
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +1
Query: 172 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWV 351
+P +IV+DP D + EA + +I + ++D+ FVD+ IP + S SI L+ V
Sbjct: 176 QPNFMIVVDPNVDRIAVKEARDKGVKIIGILDSDANPDFVDLGIPANDDSIKSISLILTV 235
Query: 352 LAREVLRLRG 381
LA ++ +G
Sbjct: 236 LADAIVNAKG 245
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/63 (31%), Positives = 35/63 (55%)
Frame = +1
Query: 172 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWV 351
+P L+++L+P ++ I E IP I LC+TD + IPC+ S S+ LM +
Sbjct: 372 KPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLTYPIPCNDDSVRSVNLMLGI 431
Query: 352 LAR 360
+++
Sbjct: 432 MSK 434
>UniRef50_Q4GXR5 Cluster: Ribosomal protein SAe; n=2; Adephaga|Rep:
Ribosomal protein SAe - Meladema coriacea
Length = 112
Score = 45.6 bits (103), Expect = 4e-04
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = +1
Query: 334 GLMWWVLAREVLRLRGVLSRDQRWD 408
GL+WW+LAREVLRLRG++ R+ +W+
Sbjct: 1 GLVWWLLAREVLRLRGLIPRETKWE 25
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 45.6 bits (103), Expect = 4e-04
Identities = 22/56 (39%), Positives = 31/56 (55%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLM 342
P LIV+DP D + EA +NIPVI LC+T+ V + IP + S+ +M
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIM 215
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 45.2 bits (102), Expect = 5e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 172 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWV 351
+P LL+VL+P ++ + EA +P IA+ +TDS V IP + S S+ + V
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFLLGV 375
Query: 352 LAREVLR-LRGVLSRD 396
LAR R L+ L+R+
Sbjct: 376 LARAGQRGLQNRLARN 391
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 44.4 bits (100), Expect = 9e-04
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +1
Query: 157 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D+ L + IP + S
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNLSKITYPIPGNNSS 210
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 44.4 bits (100), Expect = 9e-04
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +1
Query: 172 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWV 351
+P LL+V+D ++H I EA +NIPV+A+ +T+S VD IP + S SI L +
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRLYCSL 220
Query: 352 LAREVLR 372
A L+
Sbjct: 221 FADAALQ 227
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 44.4 bits (100), Expect = 9e-04
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P LLIV+DP + + EA + IPV+AL +T+ ++ IPC+ S SI L+ VL
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLIVNVL 219
Query: 355 AREVL 369
V+
Sbjct: 220 KDAVI 224
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 44.0 bits (99), Expect = 0.001
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +1
Query: 172 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWV 351
+P L+++L+P ++ I E IP I LC+TD + IPC+ S + LM +
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLMTGI 421
Query: 352 LAR 360
L++
Sbjct: 422 LSK 424
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 43.6 bits (98), Expect = 0.002
Identities = 20/79 (25%), Positives = 45/79 (56%)
Frame = +1
Query: 142 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+ + V++ IP + S
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTNCNPKSVNVPIPANDDS 205
Query: 322 SHSIGLMWWVLAREVLRLR 378
+I L+ L+ + + +
Sbjct: 206 IKAIDLIVSKLSTSIFKAK 224
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 43.2 bits (97), Expect = 0.002
Identities = 25/80 (31%), Positives = 42/80 (52%)
Frame = +1
Query: 142 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
F I+ R P + V+DP ++ + EA+ + IPVIAL +TDS +D +P + +
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDVIDYIVPGNDDA 206
Query: 322 SHSIGLMWWVLAREVLRLRG 381
SI L+ + ++ RG
Sbjct: 207 IRSIQLITHRVGDLLVEARG 226
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/78 (26%), Positives = 41/78 (52%)
Frame = +1
Query: 148 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSH 327
N ++ R P ++ ++DP ++ + EA + I +AL +TDS +D+ IP +
Sbjct: 149 NGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDSDPSQIDLPIPGNDDGIR 208
Query: 328 SIGLMWWVLAREVLRLRG 381
S+ ++ LA V+ +G
Sbjct: 209 SVEMIMRELADAVIAGKG 226
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 42.7 bits (96), Expect = 0.003
Identities = 20/63 (31%), Positives = 37/63 (58%)
Frame = +1
Query: 169 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWW 348
R+P +L+V+D ++ + EA +NIP+++L +T+ D+ IP + + SI L+
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNCDPDLTDVGIPANDDAIRSIRLIVG 215
Query: 349 VLA 357
LA
Sbjct: 216 KLA 218
>UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep:
Ribosomal protein S2 - Rubrobacter xylanophilus (strain
DSM 9941 / NBRC 16129)
Length = 306
Score = 42.3 bits (95), Expect = 0.004
Identities = 23/71 (32%), Positives = 40/71 (56%)
Frame = +1
Query: 169 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWW 348
R P + V+DP ++ + EA+ + IPV+AL +T+ +D IP + + SI L+
Sbjct: 159 RLPGAVYVVDPKREELLVREANRLRIPVVALTDTNCDPDVIDYVIPGNDDAIRSISLITR 218
Query: 349 VLAREVLRLRG 381
++A V+ RG
Sbjct: 219 LIADAVIEGRG 229
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.9 bits (94), Expect = 0.005
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +1
Query: 79 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP------AQDHQPITEASYV 240
+LKFAA TGATPIAG FTPG F + + L L P +Q H +T +
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLL 60
Query: 241 NIPVIALC 264
I LC
Sbjct: 61 YATQILLC 68
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 41.5 bits (93), Expect = 0.006
Identities = 20/79 (25%), Positives = 44/79 (55%)
Frame = +1
Query: 142 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T++ +D+ IP + +
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNTDPDDIDVIIPSNDDA 206
Query: 322 SHSIGLMWWVLAREVLRLR 378
++ L+ +A V+ R
Sbjct: 207 IRAVRLITSKMADAVIEGR 225
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 41.1 bits (92), Expect = 0.008
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +1
Query: 169 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFV 291
+ P L+I L+P Q+ PI EA +NIP+IAL ++++P R +
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLL 405
>UniRef50_Q8JIE5 Cluster: 67kD laminin receptor/ribosomal protein;
n=3; Euteleostomi|Rep: 67kD laminin receptor/ribosomal
protein - Agalychnis callidryas (Red-eyed leaf frog)
Length = 140
Score = 40.7 bits (91), Expect = 0.011
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +1
Query: 343 WWVLAREVLRLRGVLSRDQRWD 408
WW+LAREVLR+RG +SR+ W+
Sbjct: 1 WWMLAREVLRMRGTISREHPWE 22
>UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3;
Deltaproteobacteria|Rep: 30S ribosomal protein S2 -
Bdellovibrio bacteriovorus
Length = 313
Score = 40.7 bits (91), Expect = 0.011
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGL 339
P + V+D ++H + EA + IPV+A+ +T+S VD AIP + + SI L
Sbjct: 158 PSAMFVVDLPKEHIAVAEAKRLGIPVVAIADTNSDPESVDFAIPGNDDAIRSIKL 212
>UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirellula
marina DSM 3645|Rep: Ribosomal protein S2 -
Blastopirellula marina DSM 3645
Length = 243
Score = 39.9 bits (89), Expect = 0.019
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +1
Query: 148 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSH 327
N ++ R P L+++DP ++ I EA + I +AL +TD +D+ +P +
Sbjct: 153 NGLRTMNRLPETLVIVDPKKEKNAIREAHSLGITTVALTDTDCDPDEIDLPVPGNDDGIR 212
Query: 328 SIGLMWWVLAREVL 369
SI L LA VL
Sbjct: 213 SIELFTKHLADAVL 226
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 38.7 bits (86), Expect = 0.045
Identities = 17/56 (30%), Positives = 34/56 (60%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLM 342
P + V+DP ++H ++EA+ + +PV+AL +T++ + IP + + SI L+
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTNADPSKIQYIIPGNDDAIRSIKLI 229
>UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Paracoccus denitrificans (strain
Pd 1222)
Length = 261
Score = 38.7 bits (86), Expect = 0.045
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P LL V+D ++ I EA + IPV+A+ +T+ + VD IP + ++ +I L ++
Sbjct: 161 PDLLFVIDVNKEDLAIAEAKKLGIPVVAVVDTNCSPKGVDYVIPGNDDAARAIALYCDLV 220
Query: 355 AREVL 369
+R L
Sbjct: 221 SRAAL 225
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 38.7 bits (86), Expect = 0.045
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +1
Query: 130 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 273
T A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ ++D
Sbjct: 238 TGTANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAITDSD 285
>UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60;
Bacteria|Rep: 30S ribosomal protein S2 - Nocardia
farcinica
Length = 285
Score = 38.7 bits (86), Expect = 0.045
Identities = 22/64 (34%), Positives = 35/64 (54%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P + V+D ++H + EA +NIPVIA+ +T+ VD IP + + S L+ V+
Sbjct: 158 PSAIWVVDTNKEHIAVGEARKLNIPVIAILDTNCDPDLVDYPIPGNDDAIRSAALLTKVV 217
Query: 355 AREV 366
A V
Sbjct: 218 ASAV 221
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 38.3 bits (85), Expect = 0.059
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +1
Query: 163 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 303
+F P + I L +QPI EA+ N P+IA C+TDSP++ V + +
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDSPMQCVALLL 107
>UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit
S2; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S2 - Schizosaccharomyces pombe
(Fission yeast)
Length = 263
Score = 38.3 bits (85), Expect = 0.059
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P L+++L+P ++ EA ++P I + +TD+ R V IP + S L+ +L
Sbjct: 180 PDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDSLRCTDLIAGLL 239
Query: 355 AR 360
+R
Sbjct: 240 SR 241
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 37.9 bits (84), Expect = 0.078
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +1
Query: 100 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 216
T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 17 TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 37.1 bits (82), Expect = 0.14
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P ++ V+DP ++H + EA + IPV+A+ +T+ + AIP + S I ++
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTNCDPSKITYAIPGNDDSLRCIEYYCSLV 221
Query: 355 AREVL 369
A VL
Sbjct: 222 ADAVL 226
>UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330;
Bacteria|Rep: 30S ribosomal protein S2 - Shigella
flexneri
Length = 241
Score = 36.7 bits (81), Expect = 0.18
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P L V+D +H I EA+ + IPV A+ +T+S VD IP + + ++ L +
Sbjct: 158 PDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAV 217
Query: 355 AREV 366
A V
Sbjct: 218 AATV 221
>UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Rep:
Ribosomal protein S2 - Saprolegnia ferax
Length = 198
Score = 36.3 bits (80), Expect = 0.24
Identities = 22/83 (26%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Frame = +1
Query: 136 GAFTNQIQAAF---REPRLLIVL-DPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 303
G TN+ + F + L+I+L +++ +TE ++ NIP+I L NT+S + +++ I
Sbjct: 116 GLLTNKTVSNFLKHNKINLIILLKSKTKENYLLTEFNHKNIPIITLNNTNSNIDYINYPI 175
Query: 304 PCDTKSSHSIGLMWWVLAREVLR 372
+TK+ S+ + +++ + L+
Sbjct: 176 FSNTKNLKSLFFLIYLIRKTFLK 198
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.3 bits (80), Expect = 0.24
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 211 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 303
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 171
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.3 bits (80), Expect = 0.24
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 211 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 303
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
>UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n=3;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S2 -
Guillardia theta (Cryptomonas phi)
Length = 235
Score = 36.3 bits (80), Expect = 0.24
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +1
Query: 148 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSH 327
N I+ R P L++++D ++ + E + IP+I++ +T+ DIAIP + +
Sbjct: 148 NGIKNMKRLPDLVVIVDQKRETTAVQECRTLGIPIISILDTNCNPDLTDIAIPGNDDAIR 207
Query: 328 SIGLM 342
SI L+
Sbjct: 208 SIKLI 212
>UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Anaeromyxobacter sp. Fw109-5
Length = 315
Score = 35.9 bits (79), Expect = 0.31
Identities = 20/75 (26%), Positives = 38/75 (50%)
Frame = +1
Query: 154 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSI 333
I+ R P + V+D ++H + EA+ + IPV+A+ +T+ ++ IP + + SI
Sbjct: 159 IKEMSRLPAAIFVIDTKKEHIAVHEANRLGIPVVAVVDTNCDPEGIEYVIPGNDDAIRSI 218
Query: 334 GLMWWVLAREVLRLR 378
L +A + R
Sbjct: 219 RLFTGKIAEACIEGR 233
>UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal
protein S2; n=7; Eurotiomycetidae|Rep:
Mitochondrial/chloroplast ribosomal protein S2 -
Aspergillus oryzae
Length = 424
Score = 35.9 bits (79), Expect = 0.31
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 172 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWV 351
+P L++ L+P ++ + E N+P I + +TD+ V IP + S +IG++ V
Sbjct: 244 KPDLVVCLNPLENVVLLHECGLNNVPTIGVIDTDADPTRVTYPIPSNDDSMRAIGVIAGV 303
Query: 352 LAR 360
L R
Sbjct: 304 LGR 306
>UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11;
Proteobacteria|Rep: Ribosomal protein S2 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 246
Score = 35.1 bits (77), Expect = 0.55
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGL 339
P + V+D +TEA+ + +PVIA+ +T+ VD IP + SS ++ L
Sbjct: 157 PDAIFVVDVGYHKIAVTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVAL 211
>UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep:
Ribosomal protein S2 - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 291
Score = 35.1 bits (77), Expect = 0.55
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +1
Query: 169 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWW 348
R P+L+ ++DP +++ + E + IP++A+ +T+ +D IP + + +I L
Sbjct: 156 RLPQLIFIIDPHRENIAVKEGRKLGIPIMAVTDTNCDPDLIDYIIPGNDDAIRAIKLFVT 215
Query: 349 VLA 357
+A
Sbjct: 216 AMA 218
>UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)|Rep:
Ribosomal protein S2 - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 312
Score = 35.1 bits (77), Expect = 0.55
Identities = 17/72 (23%), Positives = 35/72 (48%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P ++ V+D + + EA +++P+I + +T+ +D IP + S +IG +
Sbjct: 157 PDVIFVIDIGVEKNAVAEAKKLHLPIIGIVDTNHSPEGIDYVIPGNDDSIRAIGYYAREI 216
Query: 355 AREVLRLRGVLS 390
A +L + S
Sbjct: 217 ANAILEAKAATS 228
>UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1;
uncultured marine gamma proteobacterium EBAC20E09|Rep:
Predicted 30S ribosomal protein S2 - uncultured marine
gamma proteobacterium EBAC20E09
Length = 277
Score = 34.7 bits (76), Expect = 0.73
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P + V+D + + EA + IP+IAL +T+S +D+ IP + + SI L+ V+
Sbjct: 132 PDAIFVIDVKYEKIAVLEAKKMGIPIIALVDTNSDPDGIDMIIPGNDDAIRSIRLITKVI 191
Query: 355 A 357
+
Sbjct: 192 S 192
>UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S2 -
Chaetosphaeridium globosum
Length = 191
Score = 34.7 bits (76), Expect = 0.73
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 163 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF-VDIAIPCDTKS 321
++ P LIV +P + I EA+ + IPV++L N++ P +D IP + S
Sbjct: 120 SYDRPSCLIVFNPCLNFTAIQEANTLGIPVVSLMNSNVPNHLKIDYPIPVNHNS 173
>UniRef50_Q0U871 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 414
Score = 34.3 bits (75), Expect = 0.96
Identities = 19/76 (25%), Positives = 37/76 (48%)
Frame = +1
Query: 133 PGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCD 312
PG + P L++ ++P +++ + E + NIP I + +T++ +V IP +
Sbjct: 259 PGFEEQLFNRSVLRPDLVVCMNPLENYVLLHECALNNIPTIGVIDTNADPTWVTYPIPAN 318
Query: 313 TKSSHSIGLMWWVLAR 360
S I ++ VL R
Sbjct: 319 DDSHRCIQVIAGVLGR 334
>UniRef50_Q6NR54 Cluster: RE72153p; n=2; Drosophila
melanogaster|Rep: RE72153p - Drosophila melanogaster
(Fruit fly)
Length = 1173
Score = 33.9 bits (74), Expect = 1.3
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 220 ITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSI-GLMWWVLAREVLRLRGVLSRD 396
+T A VN+ + AL + D+ L+ D+ + CD K++ +I + W+ +++ RG++ +
Sbjct: 378 VTHAPIVNLNLGALLDPDNLLKGTDVYLECDVKANPAITRVEWYHSDKQLHSSRGIIISN 437
Query: 397 Q 399
Q
Sbjct: 438 Q 438
>UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95;
Bacteria|Rep: 30S ribosomal protein S2 -
Rhodopseudomonas palustris
Length = 331
Score = 33.9 bits (74), Expect = 1.3
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P L+ V+D ++ I EA + IPV A+ +T+ + + +P + + +I L ++
Sbjct: 160 PDLIFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIALYCDLV 219
Query: 355 AREVL 369
AR V+
Sbjct: 220 ARAVI 224
>UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2;
n=252; Streptophyta|Rep: Chloroplast 30S ribosomal
protein S2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 33.9 bits (74), Expect = 1.3
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSI 333
P ++I+LD +++ + E + IP I+L +T+ DI+IP + + SI
Sbjct: 162 PDIVIILDQQEEYTALRECITLGIPTISLIDTNCNPDLADISIPANDDAIASI 214
>UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06308.1 - Gibberella zeae PH-1
Length = 645
Score = 33.5 bits (73), Expect = 1.7
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P L++ L+P +++ + E +IP I + +T++ +V IP + S ++ ++ VL
Sbjct: 262 PDLVVCLNPLENYTLLYECGLKSIPTIGVIDTNADPSWVTYTIPANDDSLRAMAVVGGVL 321
Query: 355 AR 360
R
Sbjct: 322 GR 323
>UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 594
Score = 33.5 bits (73), Expect = 1.7
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +1
Query: 46 VISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFRE----PRLLIVLDPAQDH 213
V SR+ Q V++ A GA P+AG A ++++ A R+ PRL+I+ + DH
Sbjct: 182 VEQSRSALQFVVVQEAESQGAAPLAGVAVVQATPDEVEEARRQDLTVPRLIILEEVQADH 241
Query: 214 QPITEASYVNIP 249
+T + ++P
Sbjct: 242 PEVTADAIRDVP 253
>UniRef50_A6R797 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 424
Score = 33.5 bits (73), Expect = 1.7
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +1
Query: 172 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWV 351
+P L++ L+P ++ + E IP I + +TD+ V IP + S S+ ++ V
Sbjct: 317 KPDLVVCLNPLENRPLLHECGLHVIPTIGIIDTDANPTHVTYPIPANDDSLRSVAVIAGV 376
Query: 352 LAR 360
L R
Sbjct: 377 LGR 379
>UniRef50_Q5KI10 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 307
Score = 33.1 bits (72), Expect = 2.2
Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Frame = +1
Query: 40 VFVISSRAFGQRAVLKFAAHTGATPIA-GRFTPGAFTNQ---------IQAAFREPRLLI 189
V ++ +R Q+ + K A G++ PG TN + +++ P L+I
Sbjct: 162 VLIVGTRPGHQKMIQKAKERLEDNGFAVGQWIPGLLTNAETFFGMKPLLDKSYK-PDLVI 220
Query: 190 VLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLM 342
L+ +++ I E + +IP + + +TD+ R V IP + +S + L+
Sbjct: 221 FLNASENTPAIRECTSRHIPTVGIVDTDTDPRLVTYPIPANMESMRTAELI 271
>UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep:
Ribosomal protein S2 - Desulfuromonas acetoxidans DSM
684
Length = 256
Score = 32.7 bits (71), Expect = 2.9
Identities = 17/62 (27%), Positives = 33/62 (53%)
Frame = +1
Query: 154 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSI 333
I+ + P + V+DP ++ + EA + IPV+A+ +T+ +D IP + + +I
Sbjct: 151 IKGMTKLPGAMFVIDPKKEAIAVCEAKKLGIPVVAVVDTNCDPDEIDYIIPGNDDAIRAI 210
Query: 334 GL 339
L
Sbjct: 211 RL 212
>UniRef50_P46741 Cluster: Mitochondrial ribosomal protein S2; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S2 - Prototheca wickerhamii
Length = 274
Score = 32.7 bits (71), Expect = 2.9
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 169 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKS 321
++P ++ + +P + I EA+ + IPVI + S + IPC+ S
Sbjct: 201 KKPDVIFIFNPGDNKNLILEANRLQIPVIGCTDMSSNTNGISYPIPCNNTS 251
>UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=38;
Magnoliophyta|Rep: Mitochondrial ribosomal protein S2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 219
Score = 32.7 bits (71), Expect = 2.9
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVD-IAIPCDTKSS 324
P ++V D + I EAS + IPV+A+ + + PL F + I P + S
Sbjct: 131 PDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPARDS 181
>UniRef50_UPI00004488FF Cluster: UPI00004488FF related cluster; n=1;
Gallus gallus|Rep: UPI00004488FF UniRef100 entry -
Gallus gallus
Length = 107
Score = 32.3 bits (70), Expect = 3.9
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 197 SKTINSLGSRNAAWIWLVN-APGVKRPAIGVAPVWAANLS 81
S TI + S ++W+ LV PG + P +G AP W ++LS
Sbjct: 2 SLTIWDVCSAASSWLSLVGFRPGSEAPCVGTAPGWGSSLS 41
>UniRef50_Q5QUB7 Cluster: Competence/damage-inducible protein; n=3;
Alteromonadales|Rep: Competence/damage-inducible protein
- Idiomarina loihiensis
Length = 168
Score = 32.3 bits (70), Expect = 3.9
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 163 AFREPRLLIVLDPAQDHQPITEASYVNIPV--IALCNTDSPLRFVDIAIPCDTKSSHSIG 336
A ++ LL+ D + H ++EA + V IA C+ D + +A P + +G
Sbjct: 64 ALKQKLLLVESDVLEKHGAVSEACVRQMAVGAIAACDADWGIAVSGVAGPAGGTADKPVG 123
Query: 337 LMWWVLA 357
L+W +A
Sbjct: 124 LVWMAIA 130
>UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_40, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 130
Score = 32.3 bits (70), Expect = 3.9
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 61 AFGQRAVLKFAAHTGATPIAGRFTP 135
A GQ AVLK +TGA +AGR TP
Sbjct: 101 AAGQGAVLKLVRYTGAHAVAGRHTP 125
>UniRef50_A7AMH6 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 439
Score = 32.3 bits (70), Expect = 3.9
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 407 SQRWSRLRTPRSLNTSRANTHHIRPMECEDLVSHGIAMST-NLRGESVL 264
S RWS+ +T R L S + HH+ E L +H + T NLR ++L
Sbjct: 22 SSRWSQCKTVRDLLQSVQHVHHMDEAELRHLEAHSRNLLTGNLRDAAML 70
>UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster|Rep:
CG9817-PA - Drosophila melanogaster (Fruit fly)
Length = 2090
Score = 31.9 bits (69), Expect = 5.1
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -1
Query: 139 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQH 8
HQ+ + QQL +Q QQ QH Q H + Q QL +QQH
Sbjct: 968 HQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLHHDPQQQH 1011
>UniRef50_Q86NF9 Cluster: VAB-10A protein; n=8; Caenorhabditis|Rep:
VAB-10A protein - Caenorhabditis elegans
Length = 3436
Score = 31.9 bits (69), Expect = 5.1
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 58 RAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 228
+A G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3136 QATGDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>UniRef50_Q5A398 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 252
Score = 31.9 bits (69), Expect = 5.1
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -3
Query: 320 DLVSH-GIAMSTNLRGESVLHKAITGMLTYEASVIG**S*AGSKTINSLGSRNAAWIWLV 144
D ++H I TNL HK+IT L Y + + G T+NS+ ++ WI+++
Sbjct: 157 DSLNHLEICKKTNLESNLSKHKSIT--LVYNETQVSAILGKGGHTLNSIRFQSKCWIYVL 214
Query: 143 NAPGVKRP 120
G +P
Sbjct: 215 PVCGFNKP 222
>UniRef50_Q47RW4 Cluster: Putative cytochrome D ubiquinol oxidase
subunit II; n=1; Thermobifida fusca YX|Rep: Putative
cytochrome D ubiquinol oxidase subunit II - Thermobifida
fusca (strain YX)
Length = 304
Score = 31.5 bits (68), Expect = 6.8
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -3
Query: 155 IWLVNAPGVKRPAIGVAPVWAANLSTARWP 66
+WLV GV G+ PVW A + TA+WP
Sbjct: 56 VWLVATIGV---VAGLVPVWEAAVVTAQWP 82
>UniRef50_Q1V2V1 Cluster: Probable 30S ribosomal protein S2; n=2;
Candidatus Pelagibacter ubique|Rep: Probable 30S
ribosomal protein S2 - Candidatus Pelagibacter ubique
HTCC1002
Length = 273
Score = 31.5 bits (68), Expect = 6.8
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGL 339
P L+ ++D + I EAS + IP+ A+ +++S +D IP + + +I L
Sbjct: 159 PDLVFIIDTNYESLAIAEASKLGIPICAILDSNSNPDGIDYPIPGNDDARRAIDL 213
>UniRef50_A7QRU7 Cluster: Chromosome chr13 scaffold_152, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_152, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 88
Score = 31.5 bits (68), Expect = 6.8
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 217 PITEASYVNIPVIALCNTDSPLRFVDIAI 303
PI EA+ N P IA C+TD P++ V + +
Sbjct: 1 PIKEAALGNTPTIAFCDTDFPMQCVALLL 29
>UniRef50_Q4XEA3 Cluster: Cyclin related protein, putative; n=6;
Plasmodium chabaudi|Rep: Cyclin related protein,
putative - Plasmodium chabaudi
Length = 254
Score = 31.5 bits (68), Expect = 6.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +1
Query: 139 AFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSP 279
A N+++ + E +++V DH P + +YVN P++ N+ +P
Sbjct: 133 ALANKVELSEDETAIVLVSSDMNDHHPAKDFNYVN-PIVTSANSFNP 178
>UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellular
organisms|Rep: 30S ribosomal protein S2 - Xylella
fastidiosa
Length = 266
Score = 31.5 bits (68), Expect = 6.8
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +1
Query: 169 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWW 348
R P + V+D + I EA + IPV+A+ +T+ VD IP + + ++ L
Sbjct: 156 RIPDAIFVIDIGHEDIAIKEAKKLGIPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQLYAR 215
Query: 349 VLAREVL 369
A VL
Sbjct: 216 AAADAVL 222
>UniRef50_UPI0001509CD4 Cluster: hypothetical protein
TTHERM_00578670; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00578670 - Tetrahymena
thermophila SB210
Length = 750
Score = 31.1 bits (67), Expect = 8.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Frame = +1
Query: 187 IVLDPAQDHQPI-TEASYVNIPVIALC--NTDSPLRFV 291
I++DP+ +H PI T SY N +C +T SP++FV
Sbjct: 4 IIIDPSNNHSPIKTNNSYNNQNPALVCRISTPSPIKFV 41
>UniRef50_Q6A775 Cluster: Binding-protein-dependent transport system
inner membrane component; n=2; Actinomycetales|Rep:
Binding-protein-dependent transport system inner
membrane component - Propionibacterium acnes
Length = 340
Score = 31.1 bits (67), Expect = 8.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 158 WIWLVNAPGVKRPAIGVAPVWAANLSTARW 69
W W+ N GV IG +WA+ TA+W
Sbjct: 138 WGWIFNQNGVANAIIGTHIMWASGNWTAKW 167
>UniRef50_Q02AL1 Cluster: Ribosomal protein S2; n=1; Solibacter
usitatus Ellin6076|Rep: Ribosomal protein S2 -
Solibacter usitatus (strain Ellin6076)
Length = 303
Score = 31.1 bits (67), Expect = 8.9
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +1
Query: 175 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCDTKSSHSIGLMWWVL 354
P +L V+D ++ + EA + IPV+A+ +T+ VD IP + + +I L +
Sbjct: 159 PDVLFVIDSNKEGIAVKEARRLGIPVVAIVDTNCDPDEVDWVIPGNDDALRAIRLFASKI 218
Query: 355 AREVLRLRGV 384
A V+ R +
Sbjct: 219 ADAVVEGRAL 228
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,752,245
Number of Sequences: 1657284
Number of extensions: 6998260
Number of successful extensions: 17660
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 17337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17655
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18196175969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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