Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B08
(277 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL137800-8|CAC19687.1| 151|Homo sapiens actin related protein 2... 52 2e-07
AL137800-7|CAI19481.1| 135|Homo sapiens actin related protein 2... 52 2e-07
AF017807-1|AAB70561.1| 151|Homo sapiens Arp2/3 complex 16kDa su... 52 2e-07
AF006088-1|AAB64193.1| 151|Homo sapiens p16-Arc protein. 52 2e-07
BC071857-1|AAH71857.1| 88|Homo sapiens Unknown (protein for MG... 48 4e-06
BC057237-1|AAH57237.1| 154|Homo sapiens ARPC5 protein protein. 48 4e-06
AL137800-9|CAI19482.1| 154|Homo sapiens actin related protein 2... 48 4e-06
AF087842-1|AAP97155.1| 152|Homo sapiens ARC16-2 protein. 44 9e-05
BC002418-1|AAH02418.1| 153|Homo sapiens actin related protein 2... 42 3e-04
BC000798-1|AAH00798.1| 153|Homo sapiens actin related protein 2... 42 3e-04
BC000018-1|AAH00018.1| 153|Homo sapiens actin related protein 2... 42 3e-04
AL354928-9|CAI39641.1| 153|Homo sapiens actin related protein 2... 42 3e-04
BC048807-1|AAH48807.1| 277|Homo sapiens C9orf75 protein protein. 30 1.1
D45371-1|BAA08227.1| 244|Homo sapiens adipose specific collagen... 29 3.5
BC096311-1|AAH96311.1| 244|Homo sapiens adiponectin, C1Q and co... 29 3.5
BC096310-1|AAH96310.1| 244|Homo sapiens adiponectin, C1Q and co... 29 3.5
BC096309-1|AAH96309.1| 244|Homo sapiens adiponectin, C1Q and co... 29 3.5
BC096308-1|AAH96308.1| 244|Homo sapiens adiponectin, C1Q and co... 29 3.5
BC054496-1|AAH54496.1| 244|Homo sapiens ADIPOQ protein protein. 29 3.5
AJ131460-1|CAB52413.1| 244|Homo sapiens adipocyte-specific secr... 29 3.5
AB012165-1|BAA86716.1| 244|Homo sapiens gelatin-binding protein... 29 3.5
AF399609-1|AAK95094.1| 218|Homo sapiens olfactory receptor prot... 28 6.1
AB065737-1|BAC05958.1| 317|Homo sapiens seven transmembrane hel... 28 6.1
>AL137800-8|CAC19687.1| 151|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 151
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 113 MAKNTSSSA-FRKIDIDQYNEDNVKEDEADQAGPAGADEGEVCVLLNRGRYIDALR 277
M+KNT SSA FRK+D+D+Y+E+ ++E G AG DEGEV L +G AL+
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQ 56
>AL137800-7|CAI19481.1| 135|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 135
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 113 MAKNTSSSA-FRKIDIDQYNEDNVKEDEADQAGPAGADEGEVCVLLNRGRYIDALR 277
M+KNT SSA FRK+D+D+Y+E+ ++E G AG DEGEV L +G AL+
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQ 56
>AF017807-1|AAB70561.1| 151|Homo sapiens Arp2/3 complex 16kDa
subunit protein.
Length = 151
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 113 MAKNTSSSA-FRKIDIDQYNEDNVKEDEADQAGPAGADEGEVCVLLNRGRYIDALR 277
M+KNT SSA FRK+D+D+Y+E+ ++E G AG DEGEV L +G AL+
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQ 56
>AF006088-1|AAB64193.1| 151|Homo sapiens p16-Arc protein.
Length = 151
Score = 52.4 bits (120), Expect = 2e-07
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 113 MAKNTSSSA-FRKIDIDQYNEDNVKEDEADQAGPAGADEGEVCVLLNRGRYIDALR 277
M+KNT SSA FRK+D+D+Y+E+ ++E G AG DEGEV L +G AL+
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEVDSCLRQGNMTAALQ 56
>BC071857-1|AAH71857.1| 88|Homo sapiens Unknown (protein for
MGC:88523) protein.
Length = 88
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 113 MAKNTSSSA-FRKIDIDQYNEDNVKEDEADQAGPAGADEGEV 235
M+KNT SSA FRK+D+D+Y+E+ ++E G AG DEGEV
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEV 42
>BC057237-1|AAH57237.1| 154|Homo sapiens ARPC5 protein protein.
Length = 154
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 113 MAKNTSSSA-FRKIDIDQYNEDNVKEDEADQAGPAGADEGEV 235
M+KNT SSA FRK+D+D+Y+E+ ++E G AG DEGEV
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEV 42
>AL137800-9|CAI19482.1| 154|Homo sapiens actin related protein 2/3
complex, subunit 5, 16kDa protein.
Length = 154
Score = 48.4 bits (110), Expect = 4e-06
Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 1/42 (2%)
Frame = +2
Query: 113 MAKNTSSSA-FRKIDIDQYNEDNVKEDEADQAGPAGADEGEV 235
M+KNT SSA FRK+D+D+Y+E+ ++E G AG DEGEV
Sbjct: 1 MSKNTVSSARFRKVDVDEYDENKFVDEEDGGDGQAGPDEGEV 42
>AF087842-1|AAP97155.1| 152|Homo sapiens ARC16-2 protein.
Length = 152
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Frame = +2
Query: 113 MAKNTSSSAFRKIDIDQYNEDNV--KEDEADQAGPAGADEGEVCVLLNRGRYIDA 271
MA+NT SS FR++DID+++E+ +++EA A G D EV LL +G + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAARTGPDPSEVDGLLRQGDMLRA 55
>BC002418-1|AAH02418.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +2
Query: 113 MAKNTSSSAFRKIDIDQYNEDNVKEDEADQAGPA---GADEGEVCVLLNRGRYIDA 271
MA+NT SS FR++DID+++E+ +++ + A A G D EV LL +G + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRA 56
>BC000798-1|AAH00798.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +2
Query: 113 MAKNTSSSAFRKIDIDQYNEDNVKEDEADQAGPA---GADEGEVCVLLNRGRYIDA 271
MA+NT SS FR++DID+++E+ +++ + A A G D EV LL +G + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRA 56
>BC000018-1|AAH00018.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +2
Query: 113 MAKNTSSSAFRKIDIDQYNEDNVKEDEADQAGPA---GADEGEVCVLLNRGRYIDA 271
MA+NT SS FR++DID+++E+ +++ + A A G D EV LL +G + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRA 56
>AL354928-9|CAI39641.1| 153|Homo sapiens actin related protein 2/3
complex, subunit 5-like protein.
Length = 153
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Frame = +2
Query: 113 MAKNTSSSAFRKIDIDQYNEDNVKEDEADQAGPA---GADEGEVCVLLNRGRYIDA 271
MA+NT SS FR++DID+++E+ +++ + A A G D EV LL +G + A
Sbjct: 1 MARNTLSSRFRRVDIDEFDENKFVDEQEEAAAAAAEPGPDPSEVDGLLRQGDMLRA 56
>BC048807-1|AAH48807.1| 277|Homo sapiens C9orf75 protein protein.
Length = 277
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/51 (25%), Positives = 31/51 (60%)
Frame = +2
Query: 125 TSSSAFRKIDIDQYNEDNVKEDEADQAGPAGADEGEVCVLLNRGRYIDALR 277
+ SS ++ ++DQ E+ +E+E ++ G +G++E + L R ++ ++R
Sbjct: 161 SESSLEQEEEVDQQEEEEEEEEEEEEEG-SGSEEKPFALFLPRATFVSSVR 210
>D45371-1|BAA08227.1| 244|Homo sapiens adipose specific
collagen-like factor protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 83 LFYFLYF*SIMAKNTSSSAFRKIDIDQYNEDNVKEDEADQA 205
L+YF Y ++ K+ S F+K + D +E+ DQA
Sbjct: 157 LYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQA 197
>BC096311-1|AAH96311.1| 244|Homo sapiens adiponectin, C1Q and
collagen domain containing protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 83 LFYFLYF*SIMAKNTSSSAFRKIDIDQYNEDNVKEDEADQA 205
L+YF Y ++ K+ S F+K + D +E+ DQA
Sbjct: 157 LYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQA 197
>BC096310-1|AAH96310.1| 244|Homo sapiens adiponectin, C1Q and
collagen domain containing protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 83 LFYFLYF*SIMAKNTSSSAFRKIDIDQYNEDNVKEDEADQA 205
L+YF Y ++ K+ S F+K + D +E+ DQA
Sbjct: 157 LYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQA 197
>BC096309-1|AAH96309.1| 244|Homo sapiens adiponectin, C1Q and
collagen domain containing protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 83 LFYFLYF*SIMAKNTSSSAFRKIDIDQYNEDNVKEDEADQA 205
L+YF Y ++ K+ S F+K + D +E+ DQA
Sbjct: 157 LYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQA 197
>BC096308-1|AAH96308.1| 244|Homo sapiens adiponectin, C1Q and
collagen domain containing protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 83 LFYFLYF*SIMAKNTSSSAFRKIDIDQYNEDNVKEDEADQA 205
L+YF Y ++ K+ S F+K + D +E+ DQA
Sbjct: 157 LYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQA 197
>BC054496-1|AAH54496.1| 244|Homo sapiens ADIPOQ protein protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 83 LFYFLYF*SIMAKNTSSSAFRKIDIDQYNEDNVKEDEADQA 205
L+YF Y ++ K+ S F+K + D +E+ DQA
Sbjct: 157 LYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQA 197
>AJ131460-1|CAB52413.1| 244|Homo sapiens adipocyte-specific
secretory protein protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 83 LFYFLYF*SIMAKNTSSSAFRKIDIDQYNEDNVKEDEADQA 205
L+YF Y ++ K+ S F+K + D +E+ DQA
Sbjct: 157 LYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQA 197
>AB012165-1|BAA86716.1| 244|Homo sapiens gelatin-binding protein
protein.
Length = 244
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 83 LFYFLYF*SIMAKNTSSSAFRKIDIDQYNEDNVKEDEADQA 205
L+YF Y ++ K+ S F+K + D +E+ DQA
Sbjct: 157 LYYFAYHITVYMKDVKVSLFKKDKAMLFTYDQYQENNVDQA 197
>AF399609-1|AAK95094.1| 218|Homo sapiens olfactory receptor
protein.
Length = 218
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 47 SFCAKYLFTEVSLFY-FLYF*SIMAKNTSSSAFRKI 151
S CA +L T VSLFY L+F + K TSS F K+
Sbjct: 174 STCAAHL-TVVSLFYGTLFFMYVQTKVTSSINFNKV 208
>AB065737-1|BAC05958.1| 317|Homo sapiens seven transmembrane helix
receptor protein.
Length = 317
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/36 (50%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 47 SFCAKYLFTEVSLFY-FLYF*SIMAKNTSSSAFRKI 151
S CA +L T VSLFY L+F + K TSS F K+
Sbjct: 243 STCAAHL-TVVSLFYGTLFFMYVQTKVTSSINFNKV 277
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,997,928
Number of Sequences: 237096
Number of extensions: 391654
Number of successful extensions: 997
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 76,859,062
effective HSP length: 69
effective length of database: 60,499,438
effective search space used: 1330987636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -