Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B07
(331 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 54 3e-08
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 53 6e-08
AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical ... 28 1.8
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 27 4.2
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 27 4.2
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 27 4.2
AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical ... 27 4.2
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 26 5.5
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 26 7.3
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 26 7.3
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 26 7.3
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 26 7.3
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 25 9.7
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 53.6 bits (123), Expect = 3e-08
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +2
Query: 77 GRVFTRRVGRQASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSS 256
G +G ASP+A DV K+L + G++ D E V+ L GK + E+I G+ KLSS
Sbjct: 5 GAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSS 64
Query: 257 MP 262
+P
Sbjct: 65 VP 66
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 52.8 bits (121), Expect = 6e-08
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +2
Query: 98 VGRQASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 259
+G A+P D++ ILS+VG++AD+E K V+S L GK VEELI G L S+
Sbjct: 12 LGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVSV 65
Score = 28.3 bits (60), Expect = 1.4
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 66 MRYVAAYLLAVXGG 107
MRYV+AYLLAV GG
Sbjct: 1 MRYVSAYLLAVLGG 14
>AF125459-7|AAD12836.1| 971|Caenorhabditis elegans Hypothetical
protein Y25C1A.5 protein.
Length = 971
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 128 DVEKILSSVGIEADSEKLKKVISELNGKNVEELI 229
D+ ++LSS G+E + L + ++ +NVE+++
Sbjct: 325 DILRVLSSPGLEVRKKTLSLALDLVSSRNVEDMV 358
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 131 VEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 259
+E +S++GI+ D ++ KV+S G ++ L + G S +
Sbjct: 195 IESKMSAMGIDDDKKRNSKVVSTAVGYKIQILNASAEGSTSDV 237
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +2
Query: 149 SVGIEADSEKLKKVISELNGK---NVEELIEA 235
SVG AD++K K I+++NGK +V+EL+++
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 328
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +2
Query: 149 SVGIEADSEKLKKVISELNGK---NVEELIEA 235
SVG AD++K K I+++NGK +V+EL+++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 311
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Frame = +2
Query: 149 SVGIEADSEKLKKVISELNGK---NVEELIEA 235
SVG AD++K K I+++NGK +V+EL+++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 311
>AF016688-3|AAB66076.2| 674|Caenorhabditis elegans Hypothetical
protein F18A12.4 protein.
Length = 674
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 131 VEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLS-SMP 262
+ +IL + G++ DSE++ K E + ++ GKLS S+P
Sbjct: 217 ISEILEANGVQPDSEEISKEFEEYSSLQMKLAKYQSSGKLSISLP 261
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 26.2 bits (55), Expect = 5.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +2
Query: 158 IEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 259
I+ D E LKK++ E + V LIE+ L+SM
Sbjct: 381 IKLDHESLKKLLDEGDALEVMSLIESVFSSLASM 414
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 158 IEADSEKLKKVISELNGKNVEELIEA 235
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 158 IEADSEKLKKVISELNGKNVEELIEA 235
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 158 IEADSEKLKKVISELNGKNVEELIEA 235
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 158 IEADSEKLKKVISELNGKNVEELIEA 235
I D LKK I+ L+ K V+ELI A
Sbjct: 1023 ITEDFNMLKKTIATLDKKKVDELIRA 1048
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical
protein K07G5.3 protein.
Length = 1202
Score = 25.4 bits (53), Expect = 9.7
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +2
Query: 65 NALRGRVFTRRVGRQASPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 226
N + G + + V RQA+ VE SV + E + VIS+ + +L
Sbjct: 261 NIVAGEIVPKEVRRQATILPTRVEYSEDSVSLYTAPEVMDNVISQTRNRRYVQL 314
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,129,260
Number of Sequences: 27780
Number of extensions: 70698
Number of successful extensions: 245
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 245
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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