Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B04
(397 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 159 5e-40
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 159 5e-40
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 159 5e-40
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 44 3e-05
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 32 0.17
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 32 0.17
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 32 0.17
U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical pr... 30 0.69
U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical pr... 30 0.69
AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical ... 29 1.6
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 2.1
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 2.1
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 2.1
U42439-6|AAA83510.1| 266|Caenorhabditis elegans Hypothetical pr... 28 2.8
AF016688-6|AAB66074.2| 274|Caenorhabditis elegans Hypothetical ... 27 4.9
AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical ... 27 4.9
Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical p... 27 6.4
Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical pr... 27 6.4
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 26 8.5
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 26 8.5
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ... 26 8.5
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 26 8.5
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 159 bits (387), Expect = 5e-40
Identities = 84/130 (64%), Positives = 93/130 (71%)
Frame = +2
Query: 8 EAVPGDNVGFNVKNVSVKELRPXPXGGXFWGGXYVLXXEIRKTTHPG*AADFTAQVIVLN 187
EAVPGDNVGFNVKNVSVK++R G E R F AQVI++N
Sbjct: 267 EAVPGDNVGFNVKNVSVKDIR---RGSVCSDSKQDPAKEART---------FHAQVIIMN 314
Query: 188 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSQ 367
HPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+
Sbjct: 315 HPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPT- 373
Query: 368 KPLCVESFQE 397
KPLCVESF +
Sbjct: 374 KPLCVESFTD 383
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 159 bits (387), Expect = 5e-40
Identities = 84/130 (64%), Positives = 93/130 (71%)
Frame = +2
Query: 8 EAVPGDNVGFNVKNVSVKELRPXPXGGXFWGGXYVLXXEIRKTTHPG*AADFTAQVIVLN 187
EAVPGDNVGFNVKNVSVK++R G E R F AQVI++N
Sbjct: 301 EAVPGDNVGFNVKNVSVKDIR---RGSVCSDSKQDPAKEART---------FHAQVIIMN 348
Query: 188 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSQ 367
HPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+
Sbjct: 349 HPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPT- 407
Query: 368 KPLCVESFQE 397
KPLCVESF +
Sbjct: 408 KPLCVESFTD 417
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 159 bits (387), Expect = 5e-40
Identities = 84/130 (64%), Positives = 93/130 (71%)
Frame = +2
Query: 8 EAVPGDNVGFNVKNVSVKELRPXPXGGXFWGGXYVLXXEIRKTTHPG*AADFTAQVIVLN 187
EAVPGDNVGFNVKNVSVK++R G E R F AQVI++N
Sbjct: 301 EAVPGDNVGFNVKNVSVKDIR---RGSVCSDSKQDPAKEART---------FHAQVIIMN 348
Query: 188 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSQ 367
HPGQISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK ED PK +KSGDA IV L+P+
Sbjct: 349 HPGQISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPT- 407
Query: 368 KPLCVESFQE 397
KPLCVESF +
Sbjct: 408 KPLCVESFTD 417
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 44.4 bits (100), Expect = 3e-05
Identities = 36/131 (27%), Positives = 60/131 (45%)
Frame = +2
Query: 5 EEAVPGDNVGFNVKNVSVKELRPXPXGGXFWGGXYVLXXEIRKTTHPG*AADFTAQVIVL 184
E V GDN+ F +K + EL+ GG + + T F A+V+VL
Sbjct: 392 ERVVAGDNIKFKLKGIEENELQ---------GGFIICSPDSLAKT----GRVFDAEVLVL 438
Query: 185 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPS 364
H I++GY+ VL +A + +D++TG+ + K +K + I+ L S
Sbjct: 439 EHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGE--KKRAKFVKQDEKCIMRL-ES 495
Query: 365 QKPLCVESFQE 397
+P +E F+E
Sbjct: 496 PEPFVLEPFKE 506
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 31.9 bits (69), Expect = 0.17
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = +1
Query: 70 PXPPXGXXLGGXXRFAXGDSKNNPPRVSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHS 249
P PP G GG A + N PRVS R+ +A + PR KR H LPHS
Sbjct: 19 PPPPPGSEAGGSDG-ASMNGANTLPRVSKRVSAAGKTSNIPR--FKRPH----LPHSTRP 71
Query: 250 L 252
L
Sbjct: 72 L 72
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 31.9 bits (69), Expect = 0.17
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = +1
Query: 70 PXPPXGXXLGGXXRFAXGDSKNNPPRVSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHS 249
P PP G GG A + N PRVS R+ +A + PR KR H LPHS
Sbjct: 19 PPPPPGSEAGGSDG-ASMNGANTLPRVSKRVSAAGKTSNIPR--FKRPH----LPHSTRP 71
Query: 250 L 252
L
Sbjct: 72 L 72
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 31.9 bits (69), Expect = 0.17
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = +1
Query: 70 PXPPXGXXLGGXXRFAXGDSKNNPPRVSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHS 249
P PP G GG A + N PRVS R+ +A + PR KR H LPHS
Sbjct: 19 PPPPPGSEAGGSDG-ASMNGANTLPRVSKRVSAAGKTSNIPR--FKRPH----LPHSTRP 71
Query: 250 L 252
L
Sbjct: 72 L 72
>U88170-4|AAB42245.2| 425|Caenorhabditis elegans Hypothetical
protein C10G11.6 protein.
Length = 425
Score = 29.9 bits (64), Expect = 0.69
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 226 GLPHSPHSLQICRNQRESRPSYW*INR 306
GL HSPHS N R S P ++ INR
Sbjct: 47 GLVHSPHSSFTTENLRSSDPMFFDINR 73
>U29536-5|AAA68794.1| 246|Caenorhabditis elegans Hypothetical
protein F45E12.1 protein.
Length = 246
Score = 29.9 bits (64), Expect = 0.69
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 125 IRKTTHPG*AADFTAQVIVLNHPGQISNGYTPVLD 229
+R+T PG +DFT +V++ HP + S P +D
Sbjct: 77 LRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVD 111
>AC006816-6|ABA00154.1| 506|Caenorhabditis elegans Hypothetical
protein Y71D11A.1 protein.
Length = 506
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 258 LPKSKRKSTVVLVNQQRTTLNPLNLVMPPLSTWFPP 365
LPK+ T V + TT+ P +PP +T PP
Sbjct: 264 LPKTTVAPTTTTVPRTTTTVPPTTTTVPPTTTTVPP 299
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 LDCHTAHIACKFAEIKEKVDRRTGKSTE 307
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 LDCHTAHIACKFAEIKEKVDRRTGKSTE 307
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 224 LDCHTAHIACKFAEIKEKVDRRTGKSTE 307
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U42439-6|AAA83510.1| 266|Caenorhabditis elegans Hypothetical
protein F19C7.1 protein.
Length = 266
Score = 27.9 bits (59), Expect = 2.8
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +3
Query: 189 TQVKYQTDTHLYWIATQPT*PANLPKSKRKSTVVLVN--QQRTTLNPLNLVMPPLSTWFP 362
T V YQ +T + T T A P K L+N Q T P VMP + WF
Sbjct: 142 TYVNYQQETSAA-MNTYMTATAQDPNGACKYAQNLMNAWQNTYTKGPCRTVMPAQAGWFG 200
Query: 363 PKSPCVWS 386
+S WS
Sbjct: 201 CQSAREWS 208
>AF016688-6|AAB66074.2| 274|Caenorhabditis elegans Hypothetical
protein F18A12.2 protein.
Length = 274
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = -2
Query: 186 FSTMTCAVKSAAHPGWVVFRISXCKTXXPPQXXPPXGXGRNSLTDTFLTLKPTLS--PGT 13
FST P + + +T P PP + T T L PT++ PGT
Sbjct: 206 FSTNATTSSQTTKPKLIYNEMKKPRTTLKPSTAPPESSKAPASTGTTLATNPTITGPPGT 265
>AC024826-6|AAF60801.1| 379|Caenorhabditis elegans Hypothetical
protein Y55F3AM.9 protein.
Length = 379
Score = 27.1 bits (57), Expect = 4.9
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = +2
Query: 260 AEIKEKVDRRTGKSTEDNPKS 322
AEI + +D+ GKSTE++P++
Sbjct: 27 AEILQSLDKSLGKSTEESPEA 47
>Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical
protein M163.2 protein.
Length = 500
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 300 QQRTTLNPLNLVMPPLSTWFPPKSP 374
QQ PLN++ PPL T P + P
Sbjct: 417 QQNLPTLPLNMIPPPLQTQLPLRVP 441
>Z46267-16|CAO78720.1| 576|Caenorhabditis elegans Hypothetical
protein F49E2.2c protein.
Length = 576
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 233 HTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSQKPL 376
H A +A + EIKE V+++ ++ +D+ + S A + +PS + L
Sbjct: 282 HAAVVAAE--EIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPSSRRL 327
>Z46267-4|CAD45594.1| 517|Caenorhabditis elegans Hypothetical
protein F49E2.2b protein.
Length = 517
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 233 HTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSQKPL 376
H A +A + EIKE V+++ ++ +D+ + S A + +PS + L
Sbjct: 228 HAAVVAAE--EIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPSSRRL 273
>Z46267-3|CAA86421.3| 522|Caenorhabditis elegans Hypothetical
protein F49E2.2a protein.
Length = 522
Score = 26.6 bits (56), Expect = 6.4
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 233 HTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSQKPL 376
H A +A + EIKE V+++ ++ +D+ + S A + +PS + L
Sbjct: 228 HAAVVAAE--EIKENVEKKVDEAVQDSRSNSTSSVATTLEDLPSSRRL 273
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 224 LDCHTAHIACKFAEIKEKVDRRTGKSTE 307
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 224 LDCHTAHIACKFAEIKEKVDRRTGKSTE 307
L C ++C+ + +K+K + T KS E
Sbjct: 527 LQCQNEKLSCELSSLKDKHEEATSKSIE 554
>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
protein Y18D10A.1 protein.
Length = 1634
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 170 QVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKE 274
Q+++LNHP QI +L A C+F ++E
Sbjct: 1375 QILLLNHPNQIGKSTCYILMSDVAKY-CRFLVVEE 1408
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 26.2 bits (55), Expect = 8.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 224 LDCHTAHIACKFAEIKEKVDRRTGKSTE 307
L C ++C+ + +K+K + T KS E
Sbjct: 525 LQCQNEKLSCELSSLKDKHEEATSKSIE 552
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,709,558
Number of Sequences: 27780
Number of extensions: 232245
Number of successful extensions: 598
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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