Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B04
(397 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 185 1e-49
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 184 4e-49
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 169 1e-44
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 48 5e-08
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 2.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 6.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 6.8
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 9.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 9.0
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 9.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 9.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 9.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 9.0
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 185 bits (451), Expect = 1e-49
Identities = 96/131 (73%), Positives = 102/131 (77%)
Frame = +2
Query: 5 EEAVPGDNVGFNVKNVSVKELRPXPXGGXFWGGXYVLXXEIRKTTHPG*AADFTAQVIVL 184
+EAVPGDNVGFNVKNVSVKELR G K P AADFTAQVIVL
Sbjct: 300 QEAVPGDNVGFNVKNVSVKELRRGYVAGD------------SKNNPPKGAADFTAQVIVL 347
Query: 185 NHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPS 364
NHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE+NPKSIKSGDAAIV LVPS
Sbjct: 348 NHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPS 407
Query: 365 QKPLCVESFQE 397
KP+C E+FQE
Sbjct: 408 -KPMCAEAFQE 417
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 184 bits (447), Expect = 4e-49
Identities = 95/130 (73%), Positives = 102/130 (78%)
Frame = +2
Query: 8 EAVPGDNVGFNVKNVSVKELRPXPXGGXFWGGXYVLXXEIRKTTHPG*AADFTAQVIVLN 187
EA+PGDNVGFNVKN+SVKELR G K P AADFTAQVIVLN
Sbjct: 301 EALPGDNVGFNVKNISVKELRRGYVAGD------------SKNQPPRGAADFTAQVIVLN 348
Query: 188 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSQ 367
HPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P+
Sbjct: 349 HPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPT- 407
Query: 368 KPLCVESFQE 397
KP+CVE+FQE
Sbjct: 408 KPMCVEAFQE 417
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 169 bits (410), Expect = 1e-44
Identities = 87/120 (72%), Positives = 93/120 (77%)
Frame = +2
Query: 8 EAVPGDNVGFNVKNVSVKELRPXPXGGXFWGGXYVLXXEIRKTTHPG*AADFTAQVIVLN 187
EA+PGDNVGFNVKN+SVKELR G K P AADFTAQVIVLN
Sbjct: 12 EALPGDNVGFNVKNISVKELRRGYVAGD------------SKNQPPRGAADFTAQVIVLN 59
Query: 188 HPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSQ 367
HPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE+NPKSIKSGDAAIV L P++
Sbjct: 60 HPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 47.6 bits (108), Expect = 5e-08
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2
Query: 5 EEAVPGDNVGFNVKNVSVKELR 70
+EAVPGDNVGFNVKNVSVKELR
Sbjct: 243 QEAVPGDNVGFNVKNVSVKELR 264
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 2.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 276 KSTVVLVNQQRTTLNPLNLVM 338
KST V +R T+NP ++++
Sbjct: 142 KSTTTTVEVKRDTINPEDVIL 162
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 5.1
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +1
Query: 190 PRSNIKRIHTCIGLPHSP 243
P S +R HT G+P P
Sbjct: 1067 PMSEERRQHTAEGVPEQP 1084
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.6 bits (41), Expect = 6.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 276 KSTVVLVNQQRTTLNPLNLVM 338
KST+ V +R +NP ++++
Sbjct: 131 KSTITTVEVKRDIINPEDVIL 151
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.6 bits (41), Expect = 6.8
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +3
Query: 276 KSTVVLVNQQRTTLNPLNLVM 338
KST+ V +R +NP ++++
Sbjct: 142 KSTITTVEVKRDIINPEDVIL 162
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 9.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 269 KEKVDRRTGKSTEDNPKSIKS 331
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 9.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 269 KEKVDRRTGKSTEDNPKSIKS 331
KE+ RT + T PK I S
Sbjct: 64 KERSQDRTERETSKEPKIISS 84
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +3
Query: 300 QQRTTLNPLNLVMPPLSTW 356
+ RT L+P N +P + W
Sbjct: 380 KSRTNLDPSNRKLPAPANW 398
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 9.0
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 276 KSTVVLVNQQRTTLNPLNLVM 338
KST +R T+NP ++++
Sbjct: 142 KSTTTTAEVKRDTINPEDVIL 162
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 9.0
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 160 LHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESR 282
LHSA S SN+ + T + P +Q + ++S+
Sbjct: 942 LHSAQSVVASSASNVTNVTTNLTTILPPVKVQSQQQSQQSQ 982
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 9.0
Identities = 13/50 (26%), Positives = 21/50 (42%)
Frame = +1
Query: 139 PPRVSCRLHSASHCAKSPRSNIKRIHTCIGLPHSPHSLQICRNQRESRPS 288
P VS ++ S S N+ R G+P ++ RNQ++ S
Sbjct: 1266 PRDVSEGIYDGSGANGSFLDNLIRSSLETGIPRDQRAMTEARNQQQQASS 1315
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,872
Number of Sequences: 438
Number of extensions: 2699
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9761793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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