Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_B03
(447 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr 1|... 206 9e-55
SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr... 177 5e-46
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.081
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 27 0.99
SPBC365.08c |||Der1-like |Schizosaccharomyces pombe|chr 2|||Manual 27 1.7
SPBC1778.07 |||methyltransferase N2227 family|Schizosaccharomyce... 27 1.7
SPAC17G8.10c |dma1||mitotic spindle checkpoint protein Dma1|Schi... 26 3.0
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 25 4.0
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 5.3
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 25 7.0
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 25 7.0
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 25 7.0
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 24 9.3
SPAPJ698.02c |rps002|rpsa-2, rps0-2, rps0|40S ribosomal protein ... 24 9.3
SPCC1183.06 |ung1||uracil DNA N-glycosylase Ung1|Schizosaccharom... 24 9.3
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 24 9.3
SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces po... 24 9.3
>SPAC1782.06c |||prohibitin Phb1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 282
Score = 206 bits (504), Expect = 9e-55
Identities = 98/148 (66%), Positives = 125/148 (84%)
Frame = +1
Query: 4 RGRNVPTVTGSKDLQNVNITLRILFRPVPDQLPKIYTILGVDYDERVLPSITAEVLKAVV 183
R RN+ T TGSKDLQ V++TLR+L RP LP+IY LG+DYDERVLPSI E+LK+VV
Sbjct: 71 RPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVV 130
Query: 184 AQFDAGELITQREVVSQKVSETLTERAAQFGLILDDISITHLTFGKEFTQAVELKQVAQQ 363
AQFDA ELITQREVVS K+ + L +RA +FG+ L+D+SITH+TFGKEFT+AVE KQ+AQQ
Sbjct: 131 AQFDAAELITQREVVSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQ 190
Query: 364 DAEKARFLVEKAEQQKKAGVIAAEGDAQ 447
+AE+ARFLVE++EQ+++A VI AEG+A+
Sbjct: 191 EAERARFLVEQSEQERQANVIRAEGEAE 218
>SPCC1322.16 |phb2||prohibitin Phb2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 279
Score = 177 bits (432), Expect = 5e-46
Identities = 85/149 (57%), Positives = 114/149 (76%)
Frame = +1
Query: 1 ARGRNVPTVTGSKDLQNVNITLRILFRPVPDQLPKIYTILGVDYDERVLPSITAEVLKAV 180
A+ RN+ ++TG+KDLQ VNI R+L RP LPKIY LG DYDERVLPSI EVLK+V
Sbjct: 80 AKPRNISSLTGTKDLQMVNINCRVLSRPDVHALPKIYRTLGGDYDERVLPSIVNEVLKSV 139
Query: 181 VAQFDAGELITQREVVSQKVSETLTERAAQFGLILDDISITHLTFGKEFTQAVELKQVAQ 360
VAQF+A +LITQRE VS+ V E L +RAA+F ++LDD+S+TH+ F EFT AVE KQ+AQ
Sbjct: 140 VAQFNASQLITQRERVSRLVRENLMKRAARFNILLDDVSLTHVQFSPEFTAAVEAKQIAQ 199
Query: 361 QDAEKARFLVEKAEQQKKAGVIAAEGDAQ 447
QDA++A F V++A +K+ ++ A+G+ +
Sbjct: 200 QDAQRATFYVDRARMEKQGFIVRAQGEGR 228
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 31.1 bits (67), Expect = 0.081
Identities = 29/108 (26%), Positives = 53/108 (49%)
Frame = -2
Query: 443 ASPSAAMTPAFFCCSAFSTRNLAFSASCCATCFNSTACVNSLPNVKCVMEMSSRMSPN*A 264
+S S++ T S+ S+ + +FS++ ++ +S++ +S P SS SP+
Sbjct: 294 SSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTISSSSSSPS-- 351
Query: 263 ALSVKVSLTFCDTTSLCVISSPASNCATTAFSTSAVIEGNTLSS*STP 120
S +F TTS SS S+ +++ STS+ ++ SS S P
Sbjct: 352 ------SSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRP 393
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 27.5 bits (58), Expect = 0.99
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = -2
Query: 404 CSAFSTRNLAFSASCCATCFNSTACVNSLPNVKCVMEMSSRMSPN*AALSVKVS-LTFCD 228
C + + + A SA+ N+T C N++ N+KC S+ +P+ + +S +S L + D
Sbjct: 350 CPSRNKTSWAVSANAFPVTPNTTICSNAVKNLKC----SANGTPSGSKISQVLSELCYYD 405
Query: 227 TTSLCVISS 201
+ ISS
Sbjct: 406 NKACSSISS 414
>SPBC365.08c |||Der1-like |Schizosaccharomyces pombe|chr 2|||Manual
Length = 224
Score = 26.6 bits (56), Expect = 1.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -1
Query: 276 SELSCSLGQSLADFL*YNLSLCNQFTSIK 190
S L +L QSLA + YN SL N F+ I+
Sbjct: 117 SGLGSALNQSLAAAIAYNWSLFNSFSKIQ 145
>SPBC1778.07 |||methyltransferase N2227 family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 373
Score = 26.6 bits (56), Expect = 1.7
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Frame = +1
Query: 124 VDYDERVLPSITAEVLKAVVAQFDAGELITQREVVSQKVSETLTERAAQFGL-ILDDISI 300
++ + + +I + + FD EL + QKVS TL + A + +++
Sbjct: 66 IEQNSVLAEAIANAAIPVFCSDFDQNELFHVNVDMMQKVSSTLKQIARDWSTECVEERRT 125
Query: 301 THLTFGKEFTQAVELKQVAQQDAEKARFLVEKAEQQKKAGVIAAEGDA 444
T+ F +E + D K R LV + + A IA EG A
Sbjct: 126 TYAPFIEELNSLFPSDSI---DRSKIRVLVPGSGLGRLAFDIAVEGFA 170
>SPAC17G8.10c |dma1||mitotic spindle checkpoint protein
Dma1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.8 bits (54), Expect = 3.0
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 96 LIRHWSEQYTKCDVYILKIFASSNGGHISS 7
L+R+W+ + +YI + NGG +S+
Sbjct: 47 LVRYWNRKQNNLPIYIGRYTERYNGGDVSA 76
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 25.4 bits (53), Expect = 4.0
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +1
Query: 319 KEFTQAVELKQVAQQDAEKARFLVEKAEQQKK 414
+E T+ +L + QD++K R LVE+ E +++
Sbjct: 516 EELTELRKLLREQTQDSQKLRLLVEQLELERQ 547
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.0 bits (52), Expect = 5.3
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = -2
Query: 347 FNSTACVNSLPNVKCVMEMSSRMSPN*AALSVKVSLTFCDTTSLCVISSPASNCATTAFS 168
F S + SL N K + S P + VSL T+S +ISSP + + TA S
Sbjct: 521 FTSASSSLSLTNAKSSLSTPSTTIPT---SNSSVSL---QTSSSLIISSPIISSSLTATS 574
Query: 167 TS 162
TS
Sbjct: 575 TS 576
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 24.6 bits (51), Expect = 7.0
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 42 IFASSNGGHISSSC 1
+FAS NGGH +C
Sbjct: 295 VFASGNGGHYHDNC 308
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 24.6 bits (51), Expect = 7.0
Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -1
Query: 345 QLDGLRELLAECQ-VCDGNVIE 283
QL+GL ELL E Q +C+G E
Sbjct: 885 QLEGLHELLRESQRLCEGRTKE 906
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 24.6 bits (51), Expect = 7.0
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -1
Query: 324 LLAECQVCDGNVIED 280
++A+C +C GN+++D
Sbjct: 647 IIAKCPMCRGNIVQD 661
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 24.2 bits (50), Expect = 9.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -1
Query: 294 NVIEDESELSCSLGQSLADFL*YNLSLCNQF 202
NV+E L C+LGQ + D L N L F
Sbjct: 264 NVLEIADRLCCALGQDVLDCLFSNHILSFNF 294
>SPAPJ698.02c |rps002|rpsa-2, rps0-2, rps0|40S ribosomal protein
S0B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 287
Score = 24.2 bits (50), Expect = 9.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 388 VEKAEQQKKAGVIAAEGDAQ 447
+E+ E+QK A AAE +AQ
Sbjct: 213 IEREEEQKAAAAAAAEEEAQ 232
>SPCC1183.06 |ung1||uracil DNA N-glycosylase
Ung1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 24.2 bits (50), Expect = 9.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 82 PVPDQLPKIYTILGVDYDERVLP 150
P P L IY + +DY + V+P
Sbjct: 162 PCPPSLVNIYKAIKIDYPDFVIP 184
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 24.2 bits (50), Expect = 9.3
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 298 ITHLTFGKEFTQAVELKQVAQQDAEKARFLVEKAEQQKK 414
+TH K +TQA + KQ + +A E++ + K
Sbjct: 443 VTHNILAKHYTQATKAKQEIEDQQRQASAAREESHTEWK 481
>SPAC630.12 |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 422
Score = 24.2 bits (50), Expect = 9.3
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 118 LGVDYDERVLPSITAEVLKAV--VAQFDAGELITQREVVSQKVSETLTERAAQFGL 279
LG Y +LP ++ +LKAV +A F AG+ EVV +T ++ +
Sbjct: 241 LGYQYQNLLLPELSESILKAVEPIAAF-AGDDHDYCEVVHNYQVDTREAATTEYNV 295
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.133 0.351
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,589,083
Number of Sequences: 5004
Number of extensions: 28365
Number of successful extensions: 100
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 100
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 164204010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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