Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_B02
         (369 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   1.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   1.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   7.0  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    20   9.2  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 76  TFVLGRHLQDTVCVDF 29
           T +L  H+ D VCVDF
Sbjct: 190 TPILYDHIGDLVCVDF 205


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 334 FDCDVNGLLHFSFL 293
           FDCD+N + +F  +
Sbjct: 375 FDCDINSIQYFCLM 388


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = +2

Query: 212 NELESYAYSIKNQLQDKEKLGSKLSDDEKTKMEEAIDVAIK 334
           NE+  +         D++K+  K  DD+    ++   VA+K
Sbjct: 297 NEICEFTGDWTRVFDDQQKVPYKYKDDQWIGYDDEESVALK 337


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = +2

Query: 122 LTPEDIERMI 151
           +TP++IERM+
Sbjct: 189 ITPKEIERMV 198


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,926
Number of Sequences: 336
Number of extensions: 1184
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)