Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_B02
         (369 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    24   0.50 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   4.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   6.1  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   6.1  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    20   8.1  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    20   8.1  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    20   8.1  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 24.2 bits (50), Expect = 0.50
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 54  CRIPFASISNVTSICASC 1
           C +PF  ++ VTS C +C
Sbjct: 284 CWVPFFCVNIVTSYCKTC 301


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 4.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 257 PGAGS*SNMRNSPARFWILLAP 192
           PG GS S   +SP+ F+  ++P
Sbjct: 84  PGGGSSSPSPSSPSSFFSSVSP 105


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 67   GQRYGQPGKDCDHQRSK 117
            G +YGQ G   DH  S+
Sbjct: 1821 GSQYGQYGAPYDHYGSR 1837


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -2

Query: 83  CPYLCPRQTPAGY 45
           CP++C     AGY
Sbjct: 235 CPWICELTNDAGY 247


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 323 VAIKWLEDNQDA 358
           +A++WL DN +A
Sbjct: 228 LALRWLRDNAEA 239


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 20.6 bits (41), Expect = 6.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 323 VAIKWLEDNQDA 358
           +A++WL DN +A
Sbjct: 228 LALRWLRDNAEA 239


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -2

Query: 89  PGCPYLCP 66
           PGC  LCP
Sbjct: 313 PGCEVLCP 320


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = -2

Query: 89  PGCPYLCP 66
           PGC  LCP
Sbjct: 328 PGCEVLCP 335


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 20.2 bits (40), Expect = 8.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 55  LQDTVCVDFKCNFDLR 8
           L DTV V FK  FD R
Sbjct: 170 LFDTVHVTFKLTFDNR 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,949
Number of Sequences: 438
Number of extensions: 1406
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8804355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)