Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_A24
         (144 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    20   2.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    19   5.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    18   9.4  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              18   9.4  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    18   9.4  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    18   9.4  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 20.2 bits (40), Expect = 2.3
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +1

Query: 88  LHYDTDKC 111
           LHY+TD C
Sbjct: 713 LHYETDPC 720


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = -3

Query: 106 YLYHSANAKKYMIL*NRCHVHNSNKISSFTG 14
           Y Y +   +K++ + + C VHN + +    G
Sbjct: 312 YKYITPLIQKHLKIHDTCGVHNLHGMPGILG 342


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -3

Query: 112 NIYLYHSANAKKYMIL*NRCHVHNSNKISSFTGLTLV 2
           N  LY+  +AK        C    SN   + TGL+ V
Sbjct: 312 NPILYNVMSAKYRNAFKETCRCSPSNPSITRTGLSSV 348


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 74  ILFCICTMIQINV 112
           +LF  CTM + NV
Sbjct: 60  LLFIECTMKKFNV 72


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 63  YKIIYFFAFA 92
           YKI+YF A +
Sbjct: 252 YKILYFHAMS 261


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 5/15 (33%), Positives = 10/15 (66%)
 Frame = +1

Query: 52  GNDFIRSYTFLHLHY 96
           G+D  ++Y ++  HY
Sbjct: 119 GDDCQKTYQYVQCHY 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,561
Number of Sequences: 438
Number of extensions: 600
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 28
effective length of database: 134,079
effective search space used:  2547501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)