Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A23
(394 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia compleme... 30 3.1
EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia compleme... 30 3.1
BC004277-1|AAH04277.1| 73|Homo sapiens KIAA1794 protein protein. 30 3.1
AK024509-1|BAB14918.1| 129|Homo sapiens protein ( Homo sapiens ... 30 3.1
AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens ... 30 3.1
AK055900-1|BAB71040.1| 181|Homo sapiens protein ( Homo sapiens ... 29 4.1
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 29 4.1
BC117305-1|AAI17306.1| 131|Homo sapiens C21orf96 protein protein. 29 5.5
AK126604-1|BAC86609.1| 210|Homo sapiens protein ( Homo sapiens ... 29 5.5
U65090-1|AAC51775.2| 1380|Homo sapiens carboxypeptidase D protein. 28 9.5
D85390-1|BAA33370.1| 1380|Homo sapiens gp180-carboxypeptidase D-... 28 9.5
BC051702-1|AAH51702.1| 1380|Homo sapiens carboxypeptidase D prot... 28 9.5
BC045624-1|AAH45624.1| 1380|Homo sapiens carboxypeptidase D prot... 28 9.5
BC045549-1|AAH45549.1| 1380|Homo sapiens carboxypeptidase D prot... 28 9.5
>EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia
complementation group I protein.
Length = 1328
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 17 ISLFLRSVRYLRLWLLEIQTTPSLQQLQPSLYFILVLHSNLSREFLMTCTLLYFFDLQLQ 196
+ L V ++ L + + +LQ++ P +Y +LVL S SR+ ++ + +F L Q
Sbjct: 184 VPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSALDKQ 243
Query: 197 H 199
H
Sbjct: 244 H 244
>EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia
complementation group I isoform 3 protein.
Length = 1328
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 17 ISLFLRSVRYLRLWLLEIQTTPSLQQLQPSLYFILVLHSNLSREFLMTCTLLYFFDLQLQ 196
+ L V ++ L + + +LQ++ P +Y +LVL S SR+ ++ + +F L Q
Sbjct: 184 VPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSALDKQ 243
Query: 197 H 199
H
Sbjct: 244 H 244
>BC004277-1|AAH04277.1| 73|Homo sapiens KIAA1794 protein protein.
Length = 73
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 17 ISLFLRSVRYLRLWLLEIQTTPSLQQLQPSLYFILVLHSNLSREFLMTCTLLYFFDLQLQ 196
+ L V ++ L + + +LQ++ P +Y +LVL S SR+ ++ + +F L Q
Sbjct: 5 VPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSALDKQ 64
Query: 197 H 199
H
Sbjct: 65 H 65
>AK024509-1|BAB14918.1| 129|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20856 fis, clone ADKA01509. ).
Length = 129
Score = 29.9 bits (64), Expect = 3.1
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -1
Query: 394 HTHTHTCKGKTR-RLRKHNRHAYQMPL*KET 305
HTHTHT + + R R R+ R A+++P+ +E+
Sbjct: 68 HTHTHTQRERERERERERERPAFKIPMLRES 98
>AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens
cDNA FLJ10719 fis, clone NT2RP3001109. ).
Length = 1084
Score = 29.9 bits (64), Expect = 3.1
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 17 ISLFLRSVRYLRLWLLEIQTTPSLQQLQPSLYFILVLHSNLSREFLMTCTLLYFFDLQLQ 196
+ L V ++ L + + +LQ++ P +Y +LVL S SR+ ++ + +F L Q
Sbjct: 5 VPLTAEEVEFVVEKALSMFSKMNLQEIPPLVYQLLVLSSKGSRKSVLEGIIAFFSALDKQ 64
Query: 197 H 199
H
Sbjct: 65 H 65
>AK055900-1|BAB71040.1| 181|Homo sapiens protein ( Homo sapiens
cDNA FLJ31338 fis, clone MAMGL1000184. ).
Length = 181
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Frame = +1
Query: 268 CCSYLA*TLSVCTSLSIRASGMHAC-CVYVVYAFYPCMCVYVC 393
CC +L+V + +H C CVYV CMC C
Sbjct: 116 CCPVHPQSLTVVCMCACMCVCVHVCACVYVCMCVLVCMCACAC 158
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 271 CSYLA*TLSVCTSLSIRASGMHACCVYVVYAFYPCMCVYVC 393
C YL + +C S+ + C+ V + + C+C+ VC
Sbjct: 16 CLYLYVCVCICVSVCVCICVSVCVCICVCVSVFVCVCICVC 56
Score = 29.1 bits (62), Expect = 5.5
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 271 CSYLA*TLSVCTSLSIRASGMHACCVYVVYAFYPCMCVYVC 393
C YL L VC +S+ CVY+ + Y +CVYVC
Sbjct: 88 CMYLCVFLCVCVYVSVSV----CLCVYLHISVY--LCVYVC 122
>BC117305-1|AAI17306.1| 131|Homo sapiens C21orf96 protein protein.
Length = 131
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = -1
Query: 394 HTHTHTCKGKTRRLRKHNRHAYQMPL*KET 305
HTHTHT + + R R+ R A+++P+ +E+
Sbjct: 72 HTHTHTQRERERE-RERERPAFKIPMLRES 100
>AK126604-1|BAC86609.1| 210|Homo sapiens protein ( Homo sapiens
cDNA FLJ44641 fis, clone BRACE2030039. ).
Length = 210
Score = 29.1 bits (62), Expect = 5.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 271 CSYLA*TLSVCTSLSIRASGMHACCVYVVYAFYPCMCVYVC 393
C ++ + VCT + A +H C V VYA+ CV+VC
Sbjct: 135 CVWMHGNVHVCTVCGVYAWCVHVCTVCGVYAW----CVHVC 171
>U65090-1|AAC51775.2| 1380|Homo sapiens carboxypeptidase D protein.
Length = 1380
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 32 RSVRYLRLWLLEIQTTPSLQQ-LQPSLYFILVLHSN 136
+S Y +W LEI P++ + +P + F+ +H N
Sbjct: 961 QSTEYRHIWSLEISNKPNVSEPEEPKIRFVAGIHGN 996
>D85390-1|BAA33370.1| 1380|Homo sapiens gp180-carboxypeptidase D-like
enzyme protein.
Length = 1380
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 32 RSVRYLRLWLLEIQTTPSLQQ-LQPSLYFILVLHSN 136
+S Y +W LEI P++ + +P + F+ +H N
Sbjct: 961 QSTEYRHIWSLEISNKPNVSEPEEPKIRFVAGIHGN 996
>BC051702-1|AAH51702.1| 1380|Homo sapiens carboxypeptidase D protein.
Length = 1380
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 32 RSVRYLRLWLLEIQTTPSLQQ-LQPSLYFILVLHSN 136
+S Y +W LEI P++ + +P + F+ +H N
Sbjct: 961 QSTEYRHIWSLEISNKPNVSEPEEPKIRFVAGIHGN 996
>BC045624-1|AAH45624.1| 1380|Homo sapiens carboxypeptidase D protein.
Length = 1380
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 32 RSVRYLRLWLLEIQTTPSLQQ-LQPSLYFILVLHSN 136
+S Y +W LEI P++ + +P + F+ +H N
Sbjct: 961 QSTEYRHIWSLEISNKPNVSEPEEPKIRFVAGIHGN 996
>BC045549-1|AAH45549.1| 1380|Homo sapiens carboxypeptidase D protein.
Length = 1380
Score = 28.3 bits (60), Expect = 9.5
Identities = 11/36 (30%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 32 RSVRYLRLWLLEIQTTPSLQQ-LQPSLYFILVLHSN 136
+S Y +W LEI P++ + +P + F+ +H N
Sbjct: 961 QSTEYRHIWSLEISNKPNVSEPEEPKIRFVAGIHGN 996
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,919,065
Number of Sequences: 237096
Number of extensions: 1003838
Number of successful extensions: 2078
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2061
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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