Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A21
(379 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069461-1|AAL39606.1| 634|Drosophila melanogaster LD18774p pro... 78 3e-15
AE013599-2557|AAF57793.1| 634|Drosophila melanogaster CG6370-PA... 78 3e-15
AE014134-92|AAN10495.1| 713|Drosophila melanogaster CG31921-PA ... 31 0.65
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 30 0.86
AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB... 28 4.6
AY094870-1|AAM11223.1| 467|Drosophila melanogaster RE36568p pro... 27 6.1
AL031581-4|CAA20891.1| 467|Drosophila melanogaster EG:115C2.6 p... 27 6.1
AE014298-73|AAF45530.1| 448|Drosophila melanogaster CG17829-PC,... 27 6.1
AE014298-72|AAN09018.1| 467|Drosophila melanogaster CG17829-PB,... 27 6.1
AE014298-71|AAF45529.1| 467|Drosophila melanogaster CG17829-PA,... 27 6.1
BT012301-1|AAS77426.1| 346|Drosophila melanogaster LP23408p pro... 27 8.0
AE014297-4252|AAF56805.2| 346|Drosophila melanogaster CG14062-P... 27 8.0
>AY069461-1|AAL39606.1| 634|Drosophila melanogaster LD18774p
protein.
Length = 634
Score = 78.2 bits (184), Expect = 3e-15
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +2
Query: 11 GYVFALCEHMGCG-TWTVTHAEGVLLAADETDSKSLHFEGGLPVTSLLLSSIIRTYKEQK 187
GY F + +G ++ E ++ ADE D K L FEGGL +TSL+++ K
Sbjct: 167 GYAFNVAPLLGASASFIANRVEDAIVQADEVDGKLLQFEGGLSITSLIINGAFGVSKTFN 226
Query: 188 KPSPFSADQRYKFAEYLLSRRSVNSAKG 271
KP P +ADQ KFA Y LSRRSV +AKG
Sbjct: 227 KPVPITADQAVKFANYFLSRRSVQTAKG 254
>AE013599-2557|AAF57793.1| 634|Drosophila melanogaster CG6370-PA
protein.
Length = 634
Score = 78.2 bits (184), Expect = 3e-15
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +2
Query: 11 GYVFALCEHMGCG-TWTVTHAEGVLLAADETDSKSLHFEGGLPVTSLLLSSIIRTYKEQK 187
GY F + +G ++ E ++ ADE D K L FEGGL +TSL+++ K
Sbjct: 167 GYAFNVAPLLGASASFIANRVEDAIVQADEVDGKLLQFEGGLSITSLIINGAFGVSKTFN 226
Query: 188 KPSPFSADQRYKFAEYLLSRRSVNSAKG 271
KP P +ADQ KFA Y LSRRSV +AKG
Sbjct: 227 KPVPITADQAVKFANYFLSRRSVQTAKG 254
>AE014134-92|AAN10495.1| 713|Drosophila melanogaster CG31921-PA
protein.
Length = 713
Score = 30.7 bits (66), Expect = 0.65
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +3
Query: 81 CWPLMKLIPSHFISKVACQSLPCYSPRLLEHTKSRRNPRHLVQI 212
C L+P H + ++C + C P++ E+ + R +HL ++
Sbjct: 638 CTSEKPLVPQHKVDPISCDNCFCLDPKISEYCECLRALQHLQRL 681
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 30.3 bits (65), Expect = 0.86
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 48 ARGLLLMRRVCCWPLMKLIPSHFISKVACQSLPCYSPRLLEHTKS 182
+R L M+ CCWP M S ++ C L C + +HTK+
Sbjct: 300 SRTLRKMKNCCCWPRMTKAISEYVE--TC--LKCQQSKTTKHTKT 340
>AE013599-128|AAM68338.1| 1209|Drosophila melanogaster CG14471-PB,
isoform B protein.
Length = 1209
Score = 27.9 bits (59), Expect = 4.6
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -2
Query: 336 AMLIGVGTSSASVMAASSNRAAPFAEFTERRDRRYSANLYR*SALNGEGF--FCSLYVLI 163
A LIG T AA AAP + E+ DRR S + + F ++++
Sbjct: 498 ATLIGESTPPLGEAAAPLGEAAPSSAIGEKIDRRNYKECLTQSRNRRKSYEEFKAMFIEP 557
Query: 162 IEESNKEVTGRPP 124
E++K VT PP
Sbjct: 558 PAEASKSVTVPPP 570
>AY094870-1|AAM11223.1| 467|Drosophila melanogaster RE36568p
protein.
Length = 467
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 28 MRTHGMRHVDCYSCGGC 78
+++H +RHV+CY C C
Sbjct: 250 LKSHVVRHVNCYKCTMC 266
>AL031581-4|CAA20891.1| 467|Drosophila melanogaster EG:115C2.6
protein.
Length = 467
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 28 MRTHGMRHVDCYSCGGC 78
+++H +RHV+CY C C
Sbjct: 250 LKSHVVRHVNCYKCTMC 266
>AE014298-73|AAF45530.1| 448|Drosophila melanogaster CG17829-PC,
isoform C protein.
Length = 448
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 28 MRTHGMRHVDCYSCGGC 78
+++H +RHV+CY C C
Sbjct: 231 LKSHVVRHVNCYKCTMC 247
>AE014298-72|AAN09018.1| 467|Drosophila melanogaster CG17829-PB,
isoform B protein.
Length = 467
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 28 MRTHGMRHVDCYSCGGC 78
+++H +RHV+CY C C
Sbjct: 250 LKSHVVRHVNCYKCTMC 266
>AE014298-71|AAF45529.1| 467|Drosophila melanogaster CG17829-PA,
isoform A protein.
Length = 467
Score = 27.5 bits (58), Expect = 6.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 28 MRTHGMRHVDCYSCGGC 78
+++H +RHV+CY C C
Sbjct: 250 LKSHVVRHVNCYKCTMC 266
>BT012301-1|AAS77426.1| 346|Drosophila melanogaster LP23408p
protein.
Length = 346
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 279 RAAPFAEFTERRDRRYSANLYR*SALNGEGFFCSLY 172
RAAP A T +DRR A +YR G F LY
Sbjct: 87 RAAPAAITTPVQDRRCPATMYRVGYNVGNNQFLELY 122
>AE014297-4252|AAF56805.2| 346|Drosophila melanogaster CG14062-PB
protein.
Length = 346
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = -2
Query: 279 RAAPFAEFTERRDRRYSANLYR*SALNGEGFFCSLY 172
RAAP A T +DRR A +YR G F LY
Sbjct: 87 RAAPAAITTPVQDRRCPATMYRVGYNVGNNQFLELY 122
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,676,519
Number of Sequences: 53049
Number of extensions: 335239
Number of successful extensions: 898
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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