Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A19
(418 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 177 3e-45
03_01_0547 + 4093196-4093657,4094267-4095148 177 3e-45
03_01_0544 + 4082528-4082989,4083585-4084466 177 3e-45
03_01_0543 + 4076981-4077442,4078145-4079026 177 3e-45
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 92 2e-19
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 81 5e-16
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 79 1e-15
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 75 3e-14
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 75 3e-14
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 50 7e-07
02_04_0462 + 23131433-23132836 47 7e-06
02_02_0101 - 6788090-6788356,6788770-6788940 30 0.65
03_03_0053 + 14109636-14109948,14110075-14110302,14112030-141121... 30 0.86
12_01_0346 + 2652181-2653566 29 1.5
05_02_0141 - 7049557-7050333,7050522-7050557 29 1.5
01_06_0252 + 27889652-27892450 29 1.5
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 29 2.0
03_04_0206 - 18493178-18495310 29 2.0
02_04_0064 - 19375497-19375580,19375659-19375733,19376359-193765... 29 2.0
11_06_0580 - 25184019-25184024,25184096-25184851,25184870-251849... 28 2.6
10_01_0204 + 2199778-2200835,2201212-2201311 28 2.6
06_03_1231 + 28580006-28580934,28581810-28582086 28 2.6
04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738 28 2.6
02_05_0008 + 24934917-24935229,24936387-24936608,24936876-249375... 28 2.6
09_04_0094 - 14552970-14553182,14553275-14553679,14553780-145539... 28 3.5
07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950 28 3.5
02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800 28 3.5
03_02_0443 + 8538938-8539069,8540635-8540859,8541386-8541523 27 4.6
02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981 27 4.6
07_03_1080 + 23815232-23817040 27 6.0
06_03_0748 - 24126603-24128038,24128582-24128897 27 6.0
01_04_0043 + 15375459-15377606 27 6.0
11_06_0438 + 23542665-23543188,23543354-23543749,23544181-235442... 27 8.0
05_04_0178 + 18775074-18775928 27 8.0
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 177 bits (431), Expect = 3e-45
Identities = 87/136 (63%), Positives = 103/136 (75%)
Frame = +2
Query: 8 AFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGD 187
AFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK+GYNP + FVPISG+ GD
Sbjct: 140 AFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGD 199
Query: 188 NMLEPSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGI 367
NM+E S + W+K G L+EALD I P RP+DK LRLPLQDVYKIGGI
Sbjct: 200 NMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGI 247
Query: 368 GTVPVGRVETGILKPG 415
GTVPVGRVETG+LKPG
Sbjct: 248 GTVPVGRVETGVLKPG 263
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 177 bits (431), Expect = 3e-45
Identities = 87/136 (63%), Positives = 103/136 (75%)
Frame = +2
Query: 8 AFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGD 187
AFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK+GYNP + FVPISG+ GD
Sbjct: 140 AFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGD 199
Query: 188 NMLEPSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGI 367
NM+E S + W+K G L+EALD I P RP+DK LRLPLQDVYKIGGI
Sbjct: 200 NMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGI 247
Query: 368 GTVPVGRVETGILKPG 415
GTVPVGRVETG+LKPG
Sbjct: 248 GTVPVGRVETGVLKPG 263
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 177 bits (431), Expect = 3e-45
Identities = 87/136 (63%), Positives = 103/136 (75%)
Frame = +2
Query: 8 AFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGD 187
AFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK+GYNP + FVPISG+ GD
Sbjct: 140 AFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGD 199
Query: 188 NMLEPSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGI 367
NM+E S + W+K G L+EALD I P RP+DK LRLPLQDVYKIGGI
Sbjct: 200 NMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGI 247
Query: 368 GTVPVGRVETGILKPG 415
GTVPVGRVETG+LKPG
Sbjct: 248 GTVPVGRVETGVLKPG 263
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 177 bits (431), Expect = 3e-45
Identities = 87/136 (63%), Positives = 103/136 (75%)
Frame = +2
Query: 8 AFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGD 187
AFTLGVKQ+I NKMD+T P YS++R++EI KEVSSY+KK+GYNP + FVPISG+ GD
Sbjct: 140 AFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGD 199
Query: 188 NMLEPSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGI 367
NM+E S + W+K G L+EALD I P RP+DK LRLPLQDVYKIGGI
Sbjct: 200 NMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGI 247
Query: 368 GTVPVGRVETGILKPG 415
GTVPVGRVETG+LKPG
Sbjct: 248 GTVPVGRVETGVLKPG 263
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 91.9 bits (218), Expect = 2e-19
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 1/136 (0%)
Frame = +2
Query: 14 TLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 193
+ GV LIV VNKMDS E YS+ RF IK ++ ++++ GY +AVA+VPIS +N+
Sbjct: 371 SFGVDNLIVVVNKMDSVE--YSKERFNFIKSQLGAFLRSCGYKDSAVAWVPISAMENENL 428
Query: 194 LEPSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIGT 373
+ + W +G CL++A+D + PP+R K LRLP+ DV+ +G
Sbjct: 429 MTTASDTR-LSSWY--------DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQ 479
Query: 374 VPV-GRVETGILKPGT 418
V + G+VE G + G+
Sbjct: 480 VAIGGKVEVGATRSGS 495
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 80.6 bits (190), Expect = 5e-16
Identities = 51/137 (37%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 AFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWHG 184
A TLGV +LIV +NKMD +S+ R++EI+ ++ +++ GYN V F+PISG G
Sbjct: 131 AKTLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLG 190
Query: 185 DNMLEPSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGG 364
NM K W +G CL E LD I P R +R+P+ D YK
Sbjct: 191 SNMKTRMDKS--ICSWW--------DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--D 238
Query: 365 IGTVPVGRVETGILKPG 415
+GTV +G++E+G ++ G
Sbjct: 239 MGTVVMGKIESGTIREG 255
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 79.4 bits (187), Expect = 1e-15
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Frame = +2
Query: 8 AFTLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYN-PAAVAFVPISGWHG 184
A TLGV +L+V +NKMD + +S+ R++EI+ ++ ++K GYN V F+PISG G
Sbjct: 86 AKTLGVSKLVVVINKMDESTVGWSKERYDEIEGKMVPFLKSSGYNVKKDVHFLPISGLLG 145
Query: 185 DNMLEPSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGG 364
NM K W G CL E LD I P R +R+P+ D YK
Sbjct: 146 TNMKTRMDKSN-CSWW---------SGPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--D 193
Query: 365 IGTVPVGRVETGILKPG 415
+GTV +G++E+G + G
Sbjct: 194 MGTVVMGKIESGTISEG 210
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 74.5 bits (175), Expect = 3e-14
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +2
Query: 14 TLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 193
+ GV+QLIV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+
Sbjct: 387 SFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNL 444
Query: 194 LE-PSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIG 370
++ PS W +G CL++A+D++ P+R K L LP+ DV K G
Sbjct: 445 IKIPSDVR--LTSWY--------QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTG 494
Query: 371 T-VPVGRVETGILKPGT 418
G++ETG ++ G+
Sbjct: 495 QFAAFGKLETGAIRIGS 511
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 74.5 bits (175), Expect = 3e-14
Identities = 46/137 (33%), Positives = 77/137 (56%), Gaps = 2/137 (1%)
Frame = +2
Query: 14 TLGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 193
+ GV+QLIV VNKMD+ YS+ RFE IK ++ S+++ + ++V ++P+S N+
Sbjct: 387 SFGVEQLIVAVNKMDAIG--YSKERFEFIKVQLGSFLRSCNFKDSSVTWIPLSAVENQNL 444
Query: 194 LE-PSFKMPWFKGWLVERK*GKAEGKCLIEALDAILPPARPTDKALRLPLQDVYKIGGIG 370
++ PS W +G CL++A+D++ P+R K L LP+ DV K G
Sbjct: 445 IKIPSDVR--LTSWY--------QGFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTG 494
Query: 371 T-VPVGRVETGILKPGT 418
G++ETG ++ G+
Sbjct: 495 QFAAFGKLETGAIRIGS 511
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 50.0 bits (114), Expect = 7e-07
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +2
Query: 272 LIEALDAILP-PARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPG 415
L++A+D +P P R DK+ +P++DV+ I G GTV GRVE G +K G
Sbjct: 249 LMDAVDEYIPDPVRQLDKSFLMPIEDVFSIQGRGTVVTGRVEQGTIKTG 297
>02_04_0462 + 23131433-23132836
Length = 467
Score = 46.8 bits (106), Expect = 7e-06
Identities = 41/134 (30%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Frame = +2
Query: 17 LGVKQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML 196
+GV +++V +NK D + E + ++ EV + Y+ V PI L
Sbjct: 184 VGVPKIVVFLNKKDQVD---DEELLQLVELEVRELLSSYEYDGDEV---PIVAGSALKAL 237
Query: 197 EPSFKMPWFKGWLVERK*GKAEGKCLIEALDAILP-PARPTDKALRLPLQDVYKIGGIGT 373
E P K E G LI+++D +P P R TD L ++DV+ I G GT
Sbjct: 238 ENLMANPAIKRGDDEWVDGIFS---LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGT 294
Query: 374 VPVGRVETGILKPG 415
V GR+E G +K G
Sbjct: 295 VATGRIERGTVKVG 308
>02_02_0101 - 6788090-6788356,6788770-6788940
Length = 145
Score = 30.3 bits (65), Expect = 0.65
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 120 TSRKLVTIRLPSLSYPFLAGTEITCWSRLSKCHGSRDGWLSVNEERLKVNALLRPSTPSF 299
TS + V R P+ P AGTE+T + + +R ++ EE + P S
Sbjct: 9 TSPRQVAARSPADHIPAAAGTEVTARATTAMEASAR----TIAEEAVVRAPSANPYNSSE 64
Query: 300 RLLAPLTRLSVFP 338
R L PL R + FP
Sbjct: 65 RCLLPLARPNCFP 77
>03_03_0053 +
14109636-14109948,14110075-14110302,14112030-14112181,
14112305-14112578,14112687-14112739
Length = 339
Score = 29.9 bits (64), Expect = 0.86
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = -1
Query: 322 LVSGASRRKDGVEGLNKAFTFSLS-SFTLNQPSLEPWHFERRLQHVISVPAR-NGYESDG 149
L +GA DG + F+F S + T N ++ P RL + + R G SDG
Sbjct: 39 LATGAGG-DDGFSCFTRMFSFGDSITDTGNSATISPNASFNRLPYGETFFGRPTGRYSDG 97
Query: 148 SRIVTNFLDVGRDFLLDFLKSRLTV 74
IV ++G FL FL+ R TV
Sbjct: 98 RLIVDFLAELGLPFLTPFLRGRETV 122
>12_01_0346 + 2652181-2653566
Length = 461
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 297 RMASRASIRHLPSAFPHLRSTNHPLNHGILKDGSNML 187
RMA ++R + P + +H L+HG L+DG N+L
Sbjct: 201 RMAGLTTVRIIDE--PTAAAVSHGLHHGRLRDGGNVL 235
>05_02_0141 - 7049557-7050333,7050522-7050557
Length = 270
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 90 LRKSRRKSLPTSRKLVTIRLPSLSYPFLAGTEITCWSRLSKCHGSR 227
L + R +S+P + + + L LS P ++ T WS L++C +R
Sbjct: 91 LPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAAR 136
>01_06_0252 + 27889652-27892450
Length = 932
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +3
Query: 84 LDLRKSRRKSLPTSRKLVTIRLPSLSYPFLAGTEITCWSRLSKCHG-SRDGWLSVNEERL 260
L +++ + TS ++ ++ L P + +E+ ++ + G DGWL +NE L
Sbjct: 659 LHTKRNPSAAASTSITMLAVQALGLVTPLVVNSELLVMNKRRQLGGLDGDGWLRLNELML 718
Query: 261 KVNALL 278
+V L+
Sbjct: 719 RVPTLI 724
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 28.7 bits (61), Expect = 2.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -1
Query: 166 GYESDGSRIVTNF---LDVGRDFLLDFLKSRLTVWWLSGVHFVYSYNQLLDS 20
G E G RIV +D R+ +L+ L VW G+HFVY + L++
Sbjct: 212 GQELAGVRIVEPLRRCMDRARE-ILEIKTGGLVVWTRGGIHFVYRGSSYLEN 262
>03_04_0206 - 18493178-18495310
Length = 710
Score = 28.7 bits (61), Expect = 2.0
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2
Query: 44 VNKMDSTEPPYSESRFEEIKKEV 112
VNK D T Y + EEIKKEV
Sbjct: 686 VNKFDGTFEDYKDELLEEIKKEV 708
>02_04_0064 -
19375497-19375580,19375659-19375733,19376359-19376514,
19377016-19377093,19377328-19377428,19377570-19377717,
19378172-19378316,19378803-19378906,19380257-19380385,
19380526-19380636,19380734-19380863,19381915-19382034,
19382360-19382481,19382965-19383048,19383241-19383357,
19383442-19383522,19384138-19384197,19384398-19384440,
19384528-19384626,19385353-19385564,19385964-19386091,
19386246-19386396
Length = 825
Score = 28.7 bits (61), Expect = 2.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = +2
Query: 53 MDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAV------AFVPISGWHGDNMLEPS 205
M STEP + + + EV IKK+GYN + A+ G+H N PS
Sbjct: 322 MSSTEPKINT--YANFRDEVLPRIKKLGYNAVQIMAIQEHAYYGSFGYHVTNFFAPS 376
>11_06_0580 -
25184019-25184024,25184096-25184851,25184870-25184927,
25185306-25185376
Length = 296
Score = 28.3 bits (60), Expect = 2.6
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Frame = -1
Query: 319 VSGASRRKDGVEGLNKAFTFSLSSFTLN--QPSLE------PWHFERRLQHVISVPARNG 164
V+G +R + + L +A + SL S + PS E + +L +IS
Sbjct: 161 VAGTTRYAERIWALRRAQSTSLESSDMEFYAPSAEYDFNTHSTDYYSKLSSIISDEQERN 220
Query: 163 YESDGSRIVTNFLDVGRDFLLDFLKSRLTVWWLSGVHFVYSYNQLLDS 20
+E + T +G DFL+D + R W+ G ++ + LDS
Sbjct: 221 FERI-VEVATKGFRLGLDFLMDVIPPRPAYWYQGGTE-LWGGGEPLDS 266
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.3 bits (60), Expect = 2.6
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = -2
Query: 396 VSTLPTGTVP-IPPILYTSCRGRRRALSVGRAGGRMASRASIRHLPSA 256
+S +P +V + + S R RRR ++ RAG R+ SRA +R P++
Sbjct: 202 ISFVPCPSVSSVRSAIVFSARRRRRQSAIARAGARV-SRAGVRPSPAS 248
Score = 28.3 bits (60), Expect = 2.6
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = -2
Query: 399 PVSTLPTGTVPIPP----ILYTSCRGRR-RALSVGRAGGRMASRASIRHLPSA 256
P S++ G P P L T CRGR R + RAG R+ SRA +R P++
Sbjct: 288 PASSILVGVHPHRPPSSLSLSTLCRGRGGRESATARAGARV-SRAGVRPSPAS 339
>06_03_1231 + 28580006-28580934,28581810-28582086
Length = 401
Score = 28.3 bits (60), Expect = 2.6
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 114 LPTSRKLVTIRLPSLSYPFLAGTEITCWSRLSKCHGSRDGWLSVNEERLKVN 269
LP + K+ TI + L + + C G GW+ + E RL +N
Sbjct: 79 LPANMKVSTIAVAPLDSIHIVAPNVNNRPSCPLCRGDVIGWIVIGEARLHLN 130
>04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738
Length = 707
Score = 28.3 bits (60), Expect = 2.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 258 AFPHLRSTNHPLNHGILKDGSNMLS 184
AF HL S +HP+ HG +K + +L+
Sbjct: 507 AFAHLHSLSHPILHGDVKPANILLA 531
>02_05_0008 +
24934917-24935229,24936387-24936608,24936876-24937591,
24937646-24937728,24938448-24938514,24938833-24939228,
24939276-24939318,24939380-24939474,24940287-24940314,
24940636-24940754
Length = 693
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 252 PHLRSTNHPLNHGILKDGSNML 187
PH S +H L +LKDGSN L
Sbjct: 587 PHASSKDHNLKSKVLKDGSNEL 608
>09_04_0094 -
14552970-14553182,14553275-14553679,14553780-14553902,
14554156-14554367,14554486-14554514,14554661-14555166
Length = 495
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 41 GVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 175
G + + PP +++ +E ++ VSS+ G AA A VP G
Sbjct: 43 GTSSSTAAAPPPTDAALQEFRRWVSSHGADAGAGAAAPAAVPEGG 87
>07_03_1712 + 28932328-28932502,28932583-28932902,28933405-28933950
Length = 346
Score = 27.9 bits (59), Expect = 3.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 231 HPLNHGILKDGSNMLSPCQPEMGTKATAAG 142
HP + +L G N L+ C P + AT AG
Sbjct: 258 HPSLNQLLGVGDNFLAECYPSTASTATVAG 287
>02_04_0630 - 24600242-24600839,24600948-24601077,24601659-24601800
Length = 289
Score = 27.9 bits (59), Expect = 3.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 332 DGEPCQWGEQAEGWRRGP 279
+G+ WG + GWR+GP
Sbjct: 2 EGQQFAWGREEGGWRKGP 19
>03_02_0443 + 8538938-8539069,8540635-8540859,8541386-8541523
Length = 164
Score = 27.5 bits (58), Expect = 4.6
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 26 KQLIVGVNKMDSTEPPYSESRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EP 202
+ L+V + D+T+ SES +I K++ + KKI A V P +N+ E
Sbjct: 85 ESLVVATSSTDATDNSKSESSAPDIDKKIRALKKKIRLAEAQVQGDP------ENLKPEQ 138
Query: 203 SFKMPWFKGWLVERK 247
KM +GW E K
Sbjct: 139 LEKMKKIEGWKEELK 153
>02_01_0361 - 2600398-2602780,2602815-2603479,2603553-2603981
Length = 1158
Score = 27.5 bits (58), Expect = 4.6
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = -2
Query: 408 FRIPVSTLPTGTVPIPPILYTSCRGRRRALSVGRAGGRMASRASIRHLPSAFPHLRSTNH 229
F + S L GT + P L C+ ++ + G ++ + +I + PHL+S
Sbjct: 485 FSVVASAL--GTPALLPFLKAVCQSKK-SWQARHTGIKIVQQIAILMGCAVLPHLKSLVE 541
Query: 228 PLNHGILKDGSNMLSPCQPEMGTKATAA 145
+ HG+ + + + + T A AA
Sbjct: 542 IIEHGLSDENQKVRTITALSLATLAEAA 569
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 399 PVSTLPTGTVPIPPILYTS 343
P S+ PTGT P PP+ +S
Sbjct: 123 PASSTPTGTAPTPPLSTSS 141
>06_03_0748 - 24126603-24128038,24128582-24128897
Length = 583
Score = 27.1 bits (57), Expect = 6.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 74 YSESRFEEIKKEVSSYIKKIGYNPAAVAFVP 166
+S RF KK++++ IK+I + A FVP
Sbjct: 464 HSSERFHPSKKDINAKIKEIFVDIKAAGFVP 494
>01_04_0043 + 15375459-15377606
Length = 715
Score = 27.1 bits (57), Expect = 6.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 169 NGYESDGSRIVTNFLDVGRDFLLDFLKSRLTVWWLSGVHF 50
+G + V ++ FL DFL S+LTV++ SG F
Sbjct: 288 DGLLGESHERVFRVIETELSFLADFLYSKLTVFYASGWWF 327
>11_06_0438 +
23542665-23543188,23543354-23543749,23544181-23544205,
23544970-23545029
Length = 334
Score = 26.6 bits (56), Expect = 8.0
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 228 DGWLSVNEERLKVNALLRPSTPSFRLLAPLTRLSV 332
DGWL ++E V L P T RLL L+ +V
Sbjct: 60 DGWLLFDDEEFDVLRLTSPLTGKTRLLPALSEDTV 94
>05_04_0178 + 18775074-18775928
Length = 284
Score = 26.6 bits (56), Expect = 8.0
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -2
Query: 384 PTGTVPIPPILYTSCRGRRRALSV-GRAGGRMA 289
P G P+PP L T RG R V R GR+A
Sbjct: 138 PRGGAPLPPPLTTLARGGSRVRMVQERRDGRLA 170
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,124,504
Number of Sequences: 37544
Number of extensions: 293765
Number of successful extensions: 1173
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 754585524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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