Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A16
(386 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 159 7e-40
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 159 7e-40
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 159 7e-40
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 159 7e-40
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 159 7e-40
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 159 7e-40
12_02_1282 + 27528159-27529148,27529549-27529614 159 9e-40
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 159 9e-40
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 158 2e-39
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 157 4e-39
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 67 4e-12
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 53 9e-08
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 46 1e-05
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 42 1e-04
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 36 0.015
07_03_0667 + 20517700-20517981 30 0.56
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136... 29 0.97
05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023 29 0.97
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 29 1.3
01_03_0150 + 13220224-13220468,13221903-13222124,13222164-132223... 29 1.3
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 29 1.7
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 29 1.7
04_04_1678 - 35314795-35315066,35315744-35315882 29 1.7
02_04_0540 + 23748610-23748930,23749054-23749157,23749889-237500... 29 1.7
06_03_0013 - 15393830-15394060,15394238-15394672 28 2.2
01_06_1612 - 38635703-38636215,38638725-38638967 27 3.9
02_01_0555 + 4086434-4087157,4087257-4087943,4088495-4089162 27 6.9
10_08_0295 - 16581014-16583071 26 9.1
08_01_1036 + 10520727-10521117,10521301-10521479,10521603-105225... 26 9.1
04_03_1020 - 21761297-21761555,21761630-21761739,21762402-217626... 26 9.1
03_05_0407 - 23906388-23906966,23907028-23907915,23908141-239087... 26 9.1
03_02_0885 - 12169913-12170497,12170593-12170943 26 9.1
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 26 9.1
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 159 bits (386), Expect = 7e-40
Identities = 74/90 (82%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
LV DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 159 bits (386), Expect = 7e-40
Identities = 74/90 (82%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
LV DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 159 bits (386), Expect = 7e-40
Identities = 74/90 (82%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
LV DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 159 bits (386), Expect = 7e-40
Identities = 74/90 (82%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
LV DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 159 bits (386), Expect = 7e-40
Identities = 74/90 (82%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
LV DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 159 bits (386), Expect = 7e-40
Identities = 74/90 (82%), Positives = 80/90 (88%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
LV DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 70 KYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 159 bits (385), Expect = 9e-40
Identities = 74/90 (82%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
LV DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 159 bits (385), Expect = 9e-40
Identities = 74/90 (82%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
LV DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 69
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 70 KYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 158 bits (383), Expect = 2e-39
Identities = 73/90 (81%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
+V DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGIL L
Sbjct: 9 IVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL 68
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 69 KYPIEHGIVNNWDDMEKIWHHTFYNELRVA 98
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 157 bits (380), Expect = 4e-39
Identities = 72/90 (80%), Positives = 79/90 (87%), Gaps = 2/90 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
+V DNG+GM + F G+DAP + PSIVGRPRH GVMVGMGQKD+YVGDEAQ+KRGIL L
Sbjct: 9 IVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQAKRGILTL 68
Query: 296 KYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
KYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 69 KYPIEHGIVNNWDDMEKIWHHTFYNELRVA 98
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 67.3 bits (157), Expect = 4e-12
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +2
Query: 122 LVVDNGSG-MSSRFRGNDAPARI-PSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 289
+V DNG+G + F G + P + P +VGRP R++ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 382
+ YP+ +GIV +WDDM IW H FY+EL+V
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDHAFYSELKV 97
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 52.8 bits (121), Expect = 9e-08
Identities = 38/107 (35%), Positives = 50/107 (46%), Gaps = 20/107 (18%)
Frame = +2
Query: 119 ALVVDNGSGMSSR-FRGNDAPA-RIPSIVGRPRH---QGVMVG------------MGQKD 247
A+V+DNG+G S F GN P IP++V Q M M D
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLD 67
Query: 248 SYVGDEAQS---KRGILRLKYPIEHGIVTNWDDMEKIWHHTFYNELR 379
++GDEA S G+ K+PI HG V +WD ME+ W +N LR
Sbjct: 68 FFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLR 114
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 45.6 bits (103), Expect = 1e-05
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 21/108 (19%)
Frame = +2
Query: 119 ALVVDNGSGMSSR-FRGNDAPARI-PSIV-------GRPRH---QGVMVG------MGQK 244
A+V+DNG+G + F GN P I P++V G+ R +G + M
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
Query: 245 DSYVGDEAQSKR---GILRLKYPIEHGIVTNWDDMEKIWHHTFYNELR 379
D ++G++A ++ L YPI +G V NWD ME+ W +N LR
Sbjct: 68 DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLR 115
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 42.3 bits (95), Expect = 1e-04
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 251 YVGDEAQSKRGILRLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 382
YVG E + +R + + P++ G VT+WD ++ IW+H F L +
Sbjct: 120 YVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLI 163
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 35.5 bits (78), Expect = 0.015
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 110 GSAALVVDNGSGM-SSRFRGNDAP-ARIPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 283
GS +V+DNG G+ + F G+ P A +P+ + +P G K V D+ Q++
Sbjct: 4 GSGVVVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDV 55
Query: 284 I---LRLKYPIEHGIVTNWDDMEKIWHHTFYNELRV 382
+ L+ PI+ G + N + ++W N L+V
Sbjct: 56 DVTGMTLRRPIDRGYLINQEVQREVWERVIRNLLQV 91
>07_03_0667 + 20517700-20517981
Length = 93
Score = 30.3 bits (65), Expect = 0.56
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +1
Query: 115 CRVGRRQWVRNVKPVSRERRSRPYSLDRGATSSPGRHGRHGSEG 246
CR G+R+W R +P R+ P SL R T G G G+ G
Sbjct: 52 CRNGKRRWERGARP-----RALPPSLGRMRTGGSGPGGSAGTGG 90
>11_06_0102 +
20112731-20112928,20113314-20113514,20113606-20113695,
20114269-20114457,20115375-20115387,20115824-20115990,
20117334-20117522,20118940-20119053,20120912-20121010,
20122368-20122490,20122579-20122701,20123179-20123277,
20124786-20124842,20125136-20125182,20125296-20125439,
20125540-20125717,20126318-20126398,20126480-20126563,
20126624-20126629
Length = 733
Score = 29.5 bits (63), Expect = 0.97
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = -2
Query: 361 GVMPDLLHIVPVGDDAVFDG 302
G++ DL+++ VGDDA++DG
Sbjct: 405 GLIRDLIYVGAVGDDAIYDG 424
>05_05_0382 + 24547680-24548760,24548887-24549033,24549389-24550023
Length = 620
Score = 29.5 bits (63), Expect = 0.97
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 92 NHNVRRGSAALVVDNGSGMSSRFRGNDAPARIPSIVGRPR 211
+H+VR G+AA +GS +SR N+AP P+I G R
Sbjct: 557 HHHVRAGAAAAA--HGSVRTSRQSRNNAPPMAPTIRGADR 594
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 29.1 bits (62), Expect = 1.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +2
Query: 302 PIEHGIVTNWDDMEKIWHHTFYNELRV 382
P++ G +WD ++ IW+H F L +
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLI 118
>01_03_0150 +
13220224-13220468,13221903-13222124,13222164-13222376,
13222549-13222691,13225813-13226387,13226776-13227155,
13227256-13227342,13227469-13227799,13227880-13228290,
13228373-13228432,13228561-13228761
Length = 955
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 104 RRGSAALVVDNGSGMSSRFRGNDAPARI---PSIVGRPRHQGVMVG 232
R+ S+ VDNG G R RG P+R+ P+ +G + G +VG
Sbjct: 190 RQRSSGDGVDNGGGRGWRRRGRQRPSRLTTAPAALGAIKSLGEVVG 235
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 28.7 bits (61), Expect = 1.7
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 272 SKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 364
++R + + P++ G +WD ++ IW+H F
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF 193
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 28.7 bits (61), Expect = 1.7
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 272 SKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 364
++R + + P++ G +WD ++ IW+H F
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF 94
>04_04_1678 - 35314795-35315066,35315744-35315882
Length = 136
Score = 28.7 bits (61), Expect = 1.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 134 NGSGMSSRFRGNDAPARIPSIV 199
NG GM + RGND PA + I+
Sbjct: 80 NGCGMEAWMRGNDVPAAVSPII 101
>02_04_0540 +
23748610-23748930,23749054-23749157,23749889-23750063,
23750149-23750212,23750867-23750946,23751128-23751287,
23751415-23751476,23751607-23751666,23751824-23751882,
23752194-23752275,23752691-23752740,23752847-23752980,
23753508-23753590,23754070-23754142,23754461-23754477
Length = 507
Score = 28.7 bits (61), Expect = 1.7
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 142 RNVKPVSRERRSRPYSLDRGATSSPGRH-GRHGS 240
R + ERRSR SL+R SS RH G GS
Sbjct: 396 RKIDRAEHERRSRDRSLERDRASSKDRHRGDRGS 429
>06_03_0013 - 15393830-15394060,15394238-15394672
Length = 221
Score = 28.3 bits (60), Expect = 2.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 201 GDLVTRASWSAWVRRTPT*VMRHRAR 278
G + R +W+AW RRTP V H R
Sbjct: 163 GTVAKRRAWAAWTRRTPN-VWNHDYR 187
>01_06_1612 - 38635703-38636215,38638725-38638967
Length = 251
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 163 RERRSRPYSLDRGATSSPGRHGRHGSE 243
+ERRSR YSL S+ R GR G E
Sbjct: 13 KERRSRTYSLCSSDMSAARRFGRVGEE 39
>02_01_0555 + 4086434-4087157,4087257-4087943,4088495-4089162
Length = 692
Score = 26.6 bits (56), Expect = 6.9
Identities = 14/63 (22%), Positives = 21/63 (33%)
Frame = -2
Query: 190 GNTGGSVVPAKPA*HSGPIVYDQRGTSSSHIVISFXXXXXXXXXXXXXLYSLGNAAQRHS 11
G GG P+ P H+ P V RG++++ + G H
Sbjct: 306 GEPGGDQTPSNPKLHTAPAVNINRGSATAAASTAAAAGTSASGGGGGAAAKRGGRRDEHG 365
Query: 10 SLV 2
LV
Sbjct: 366 RLV 368
>10_08_0295 - 16581014-16583071
Length = 685
Score = 26.2 bits (55), Expect = 9.1
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 319 DAVFDGVFESEDTPLALCLITYVGVL-LTHADHDALVTRSPHDRGNTGGSVV 167
DAV + +S DTPL L +I + L L HD V P ++G T +VV
Sbjct: 637 DAVVEAYAKSFDTPLPLHVIAGLRALTLLDGVHDMPV---PGEKGTTATAVV 685
>08_01_1036 +
10520727-10521117,10521301-10521479,10521603-10522593,
10522613-10522656
Length = 534
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 305 IEHGIVTNWDDMEKIWHHTFYN 370
+ +G + +W D+EK +H FY+
Sbjct: 448 LPYGSINSWADLEKQFHSYFYS 469
>04_03_1020 -
21761297-21761555,21761630-21761739,21762402-21762635,
21762710-21762817,21762910-21762969,21763549-21763624,
21763710-21763870,21764485-21764547,21764657-21764744,
21765062-21765592,21766344-21766783
Length = 709
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 207 GRPTIEGIRAGASFPRNRLDIPDPLSTTNAALPR 106
G+P G + AS PR LD+ D LS + + PR
Sbjct: 17 GKPPGAGAASAASSPRKSLDLVD-LSASPSVTPR 49
>03_05_0407 -
23906388-23906966,23907028-23907915,23908141-23908753,
23908858-23909021
Length = 747
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = +2
Query: 305 IEHGIVTNWDDMEKIWHHTFYN 370
+ +G + +W D+EK +H FY+
Sbjct: 398 LPYGSINSWADLEKQFHSYFYS 419
>03_02_0885 - 12169913-12170497,12170593-12170943
Length = 311
Score = 26.2 bits (55), Expect = 9.1
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Frame = +1
Query: 121 VGRRQWVRNVKPVSRERRSRPYSLDRGATS---SPGRHGR 231
+G+R+W R + ERR+ S T + GRHGR
Sbjct: 264 LGKRRWERERRAREAERRAASTSWTHARTGWGRAAGRHGR 303
>03_01_0085 +
690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 26.2 bits (55), Expect = 9.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 302 PIEHGIVTNWDDMEKIWHH 358
P HG+V++ + EK+WH+
Sbjct: 739 PSSHGVVSSDMEPEKVWHY 757
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,657,890
Number of Sequences: 37544
Number of extensions: 261803
Number of successful extensions: 793
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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