Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A16
(386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 171 2e-43
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 171 2e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 171 2e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 171 2e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 171 2e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 171 2e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 171 2e-43
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 170 3e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 169 6e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 155 8e-39
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 141 1e-34
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 141 1e-34
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 141 1e-34
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 136 7e-33
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 120 3e-28
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 88 2e-18
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 75 1e-14
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 51 3e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 42 2e-04
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 0.65
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 28 2.6
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 28 2.6
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 28 2.6
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 28 2.6
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 28 2.6
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 28 2.6
Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical pr... 27 3.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 24 4.0
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 4.6
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 27 4.6
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 6.1
U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical pr... 27 6.1
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 26 8.1
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 26 8.1
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 26 8.1
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 171 bits (415), Expect = 2e-43
Identities = 81/92 (88%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 171 bits (415), Expect = 2e-43
Identities = 81/92 (88%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 171 bits (415), Expect = 2e-43
Identities = 81/92 (88%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (415), Expect = 2e-43
Identities = 81/92 (88%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 171 bits (415), Expect = 2e-43
Identities = 81/92 (88%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (415), Expect = 2e-43
Identities = 81/92 (88%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 171 bits (415), Expect = 2e-43
Identities = 81/92 (88%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 170 bits (414), Expect = 3e-43
Identities = 80/92 (86%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 6 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELR+A
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 169 bits (411), Expect = 6e-43
Identities = 79/92 (85%), Positives = 84/92 (91%), Gaps = 2/92 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AAL++DNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 155 bits (377), Expect = 8e-39
Identities = 71/83 (85%), Positives = 75/83 (90%), Gaps = 1/83 (1%)
Frame = +2
Query: 140 SGMSSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRLKYPIEHG 316
+G + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL LKYPIEHG
Sbjct: 2 NGERAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 61
Query: 317 IVTNWDDMEKIWHHTFYNELRVA 385
IVTNWDDMEKIWHHTFYNELRVA
Sbjct: 62 IVTNWDDMEKIWHHTFYNELRVA 84
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 141 bits (342), Expect = 1e-34
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 2/80 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKI 349
LKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 141 bits (342), Expect = 1e-34
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 2/80 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKI 349
LKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 141 bits (342), Expect = 1e-34
Identities = 69/80 (86%), Positives = 72/80 (90%), Gaps = 2/80 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDMEKI 349
LKYPIEHGIVTNWDDMEKI
Sbjct: 67 TLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 136 bits (328), Expect = 7e-33
Identities = 66/77 (85%), Positives = 69/77 (89%), Gaps = 2/77 (2%)
Frame = +2
Query: 116 AALVVDNGSGM-SSRFRGNDAPARI-PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 289
AALVVDNGSGM + F G+DAP + PSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL
Sbjct: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 290 RLKYPIEHGIVTNWDDM 340
LKYPIEHGIVTNWDDM
Sbjct: 67 TLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 120 bits (290), Expect = 3e-28
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +2
Query: 224 MVGMGQKDSYVGDEAQSKRGILRLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
MVGMGQKDSYVGDEAQSKRGIL LKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 54
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 88.2 bits (209), Expect = 2e-18
Identities = 39/83 (46%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Frame = +2
Query: 122 LVVDNGSGM-SSRFRGNDAP-ARIPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRL 295
+V+DNGSG+ + F G P R + VGRP++ VM G D ++G +A+S RG+ +
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 296 KYPIEHGIVTNWDDMEKIWHHTF 364
+YP+EHGIV NW DMEKIW + F
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIF 93
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 75.4 bits (177), Expect = 1e-14
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +2
Query: 107 RGSAALVVDNGSG-MSSRFRGNDAPARI-PSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQS 274
+G +VVDNG+G + + G + PA I PS+VGRP + VG + KD VG+E
Sbjct: 4 QGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQ 63
Query: 275 KRGILRLKYPIEHGIVTNWDDMEKIWHHTF 364
R +L + YP+++GIV NWDDM +W HTF
Sbjct: 64 LRQMLDINYPMDNGIVRNWDDMAHVWDHTF 93
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 50.8 bits (116), Expect = 3e-07
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Frame = +2
Query: 119 ALVVDNGSGMSSR-FRGNDAPARI-PSI------VGRPRHQG------VMVGMGQKDSYV 256
A V+DNG+G + + GN P I PS V Q V G+ D ++
Sbjct: 8 ACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFI 67
Query: 257 GDEAQSKRGI-LRLKYPIEHGIVTNWDDMEKIWHHTFYNELR 379
GDEA S +KYPI HGIV +WD ME+ W + LR
Sbjct: 68 GDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLR 109
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 122 LVVDNGS-GMSSRFRGNDAPARIPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRLK 298
++ DNG M +++P +P+ + + +H+ V + + +E K + ++
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIVKAKHEKKRVFVAHEQ----EECSDKFSLFYVR 61
Query: 299 YPIEHGIVTNWDDMEKIWHHTF 364
PIE G V NWD ++IW TF
Sbjct: 62 -PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 41.5 bits (93), Expect = 2e-04
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 122 LVVDNGS-GMSSRFRGNDAPARIPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILRLK 298
++ DNG M +++P +P+ + + +H+ V + + +E K + ++
Sbjct: 6 IIFDNGGHNMKIGTIDSESPRLVPNSIVKAKHEKKRVFVAHEQ----EECSDKFSLFYVR 61
Query: 299 YPIEHGIVTNWDDMEKIWHHTF 364
PIE G V NWD ++IW TF
Sbjct: 62 -PIERGYVVNWDTQQQIWEKTF 82
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 0.65
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 199 GATSSPGRHGRHGSEG 246
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 732 ERGADGAPGLHGSRGDQGL 750
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 335 ERGADGAPGLHGSRGDQGL 353
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 695 ERGADGAPGLHGSRGDQGL 713
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 207 ERGADGAPGLHGSRGDQGL 225
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 732 ERGADGAPGLHGSRGDQGL 750
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 335 ERGADGAPGLHGSRGDQGL 353
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 695 ERGADGAPGLHGSRGDQGL 713
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 207 ERGADGAPGLHGSRGDQGL 225
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 335 ERGADGAPGLHGSRGDQGL 353
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 193 DRGATSSPGRHGRHGSEGL 249
+RGA +PG HG G +GL
Sbjct: 674 ERGADGAPGLHGSRGDQGL 692
>Z70681-1|CAA94580.1| 307|Caenorhabditis elegans Hypothetical
protein C30F2.1 protein.
Length = 307
Score = 27.5 bits (58), Expect = 3.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 196 RGATSSPGRHGRHGSEG 246
RGA PGR GRHG G
Sbjct: 270 RGAPGLPGRTGRHGKPG 286
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 12/38 (31%), Positives = 14/38 (36%)
Frame = +1
Query: 211 SPGRHGRHGSEGLLRR**GTEQEGYPQTQIPHRTRHRH 324
+P HG HG G+ G GY H H H
Sbjct: 599 APAHHGHHGEHGVHH---GHHGAGYGAHHGHHGAHHHH 633
Score = 21.4 bits (43), Expect(2) = 4.0
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 199 GATSSPGRHGRHG 237
G+ SP HG HG
Sbjct: 553 GSHHSPAHHGHHG 565
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Frame = -3
Query: 354 CQIFSISSQLVTMPC-SMGYLSLRIPL----LLCASSPT*ESF*PMP 229
CQ+FS QLVTM SMG + L++ + LL + S T + P P
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNP 297
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.1 bits (57), Expect = 4.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 199 GATSSPGRHGRHGS 240
G PGRHGRHGS
Sbjct: 358 GPPHCPGRHGRHGS 371
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 200 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 364
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 200 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILRLKYPIEHGIVTNWDDMEKIWHHTF 364
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>U61952-4|AAK84529.1| 267|Caenorhabditis elegans Hypothetical
protein F42A9.7 protein.
Length = 267
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 97 QCATRKCRVGRRQWVRNVKPVSRERRSRPYSLDRGATSSPGRHGRHGSEG 246
QCAT K +R+ R+ K RRSR + +S G+ R G
Sbjct: 21 QCATAKRPANQRKSQRSTKSRKSSRRSRRRNGRSRKSSRSGKSSRSSKSG 70
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 134 NGSGMSSRFRGNDAPARIPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 286
+GS S R+RG+D + + S G + ++ Q D DE Q + +
Sbjct: 14 SGSISSKRYRGSDTGSGMDSEAGETCAEMLLSSRNQDDEEQSDEKQLSQSL 64
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 134 NGSGMSSRFRGNDAPARIPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 286
+GS S R+RG+D + + S G + ++ Q D DE Q + +
Sbjct: 14 SGSISSKRYRGSDTGSGMDSEAGETCAEMLLSSRNQDDEEQSDEKQLSQSL 64
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 26.2 bits (55), Expect = 8.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +2
Query: 134 NGSGMSSRFRGNDAPARIPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 286
+GS S R+RG+D + + S G + ++ Q D DE Q + +
Sbjct: 14 SGSISSKRYRGSDTGSGMDSEAGETCAEMLLSSRNQDDEEQSDEKQLSQSL 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,197,301
Number of Sequences: 27780
Number of extensions: 190901
Number of successful extensions: 721
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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