Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_A16
         (386 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    24   0.53 
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   2.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   2.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.5  

>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 0.53
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 157 VSRERRSRPYSLDRGATSSPGRHGRHGSEGL 249
           +SRE+R     L++  T+  G HG HG  GL
Sbjct: 114 LSREQRFLRRRLEQ-LTNQTGLHGLHGLHGL 143


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 376 QLIVEGVMPDLLHIV 332
           Q +V+ V PD+LH++
Sbjct: 23  QTVVDKVPPDMLHLI 37


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
 Frame = +1

Query: 130 RQWVR-NVKPVSR--ERRSRPYSLDRGATSSPGRHGRHGSEGL 249
           R W R +   VSR   R SR   L RG   S  R+GRH    L
Sbjct: 23  RDWFRISAGCVSRISNRISRNRVLLRGQCISSRRNGRHNVHSL 65


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 289 QTQIPHRTRHRHQ 327
           Q+Q PH+  H HQ
Sbjct: 806 QSQPPHQQLHHHQ 818


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 184 TGGSVVPAKPA*HSGPIVYDQRGTSSSH 101
           +GGSV+ A    ++ PI+ +  G+ S++
Sbjct: 441 SGGSVLRATKEYNTVPIIAESYGSGSTN 468


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 184 TGGSVVPAKPA*HSGPIVYDQRGTSSSH 101
           +GGSV+ A    ++ PI+ +  G+ S++
Sbjct: 441 SGGSVLRATKEYNTVPIIAESYGSGSTN 468


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -2

Query: 184 TGGSVVPAKPA*HSGPIVYDQRGTSSSH 101
           +GGSV+ A    ++ PI+ +  G+ S++
Sbjct: 441 SGGSVLRATKEYNTVPIIAESYGSGSTN 468


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -2

Query: 205 SPHDRGNTGGSVVPAKPA 152
           SP D G   G+  P KPA
Sbjct: 576 SPSDSGIESGTEKPDKPA 593


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,023
Number of Sequences: 438
Number of extensions: 2244
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9391092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)