Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_A15
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   3.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.9  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    20   8.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   8.6  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +1

Query: 145 ICYRKNTAAMVVPSLKLTKRGLRNSKI 225
           IC     +A+ V +L L  RG+R +++
Sbjct: 283 ICLVTFASALAVVTLNLHHRGVRGTRV 309



 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 277 DQENQQTTMNCSELKAHSDNYL 342
           D++NQ  T NC   +  +D++L
Sbjct: 46  DEKNQILTTNCWVTQIWTDHHL 67


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 137 YVFLQAFYIGMKIYLFF 87
           Y  L +FYI M + LFF
Sbjct: 250 YSALGSFYIPMLVMLFF 266


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 9/26 (34%), Positives = 11/26 (42%)
 Frame = +3

Query: 255 IKADESLRPGKPTNYDELFGIEGSFR 332
           IK    ++ G        FGI G FR
Sbjct: 103 IKGQSEVQRGPGGRLSPYFGINGGFR 128


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 3   WSSRGGGALELVDPRA 50
           W++R  G  +LVD +A
Sbjct: 480 WTNRERGVFKLVDSKA 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,347
Number of Sequences: 438
Number of extensions: 2745
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)