Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A13
(331 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for ... 151 4e-37
BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32 p... 151 4e-37
BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32 p... 151 4e-37
AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32 p... 151 4e-37
BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein. 51 7e-07
BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein. 50 1e-06
BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein. 49 3e-06
U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein. 32 0.49
BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1... 32 0.49
BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein. 32 0.49
BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein. 29 2.6
BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein. 29 2.6
BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesi... 29 2.6
AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein. 29 2.6
>X03342-1|CAA27048.1| 135|Homo sapiens protein ( Human mRNA for
ribosomal protein L32. ).
Length = 135
Score = 151 bits (367), Expect = 4e-37
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = +1
Query: 67 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 246
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 247 NKKSRHMLPSGYRKVLVHN 303
NKK++HMLPSG+RK LVHN
Sbjct: 63 NKKTKHMLPSGFRKFLVHN 81
>BC070209-1|AAH70209.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 151 bits (367), Expect = 4e-37
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = +1
Query: 67 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 246
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 247 NKKSRHMLPSGYRKVLVHN 303
NKK++HMLPSG+RK LVHN
Sbjct: 63 NKKTKHMLPSGFRKFLVHN 81
>BC011514-1|AAH11514.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 151 bits (367), Expect = 4e-37
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = +1
Query: 67 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 246
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 247 NKKSRHMLPSGYRKVLVHN 303
NKK++HMLPSG+RK LVHN
Sbjct: 63 NKKTKHMLPSGFRKFLVHN 81
>AB061831-1|BAB79469.1| 135|Homo sapiens ribosomal protein L32
protein.
Length = 135
Score = 151 bits (367), Expect = 4e-37
Identities = 66/79 (83%), Positives = 74/79 (93%)
Frame = +1
Query: 67 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGS 246
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 247 NKKSRHMLPSGYRKVLVHN 303
NKK++HMLPSG+RK LVHN
Sbjct: 63 NKKTKHMLPSGFRKFLVHN 81
>BC053996-1|AAH53996.1| 33|Homo sapiens RPL32P3 protein protein.
Length = 33
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +1
Query: 67 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 159
A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33
>BC015974-1|AAH15974.1| 107|Homo sapiens RPS29 protein protein.
Length = 107
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +1
Query: 223 MPNIGYGSNKKSRHMLPSGYRKVLVHN 303
MPNIGYG NKK++H+LPSG+ K LVHN
Sbjct: 27 MPNIGYGRNKKTKHILPSGFWKFLVHN 53
>BC015389-1|AAH15389.1| 82|Homo sapiens RPL32P3 protein protein.
Length = 82
Score = 49.2 bits (112), Expect = 3e-06
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 67 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 156
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>U35113-1|AAA78935.1| 715|Homo sapiens mta1 protein.
Length = 715
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +1
Query: 154 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKSRHMLPSGYRKVLVHNSS 309
KR++ + G+D +++R LMP+ G ++ ++RHM PS R +L++ S
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS--RNLLLNGKS 627
>BC142941-1|AAI42942.1| 715|Homo sapiens metastasis associated 1
protein.
Length = 715
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +1
Query: 154 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKSRHMLPSGYRKVLVHNSS 309
KR++ + G+D +++R LMP+ G ++ ++RHM PS R +L++ S
Sbjct: 582 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS--RNLLLNGKS 627
>BC009443-1|AAH09443.2| 263|Homo sapiens MTA1 protein protein.
Length = 263
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +1
Query: 154 KRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKSRHMLPSGYRKVLVHNSS 309
KR++ + G+D +++R LMP+ G ++ ++RHM PS R +L++ S
Sbjct: 130 KRSYEQHNGVDGNMKKRL----LMPSRGLANHGQTRHMGPS--RNLLLNGKS 175
>BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein.
Length = 1106
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 77 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 196
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.
Length = 2011
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 77 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 196
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesis 4
protein.
Length = 1966
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 77 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 196
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
>AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.
Length = 1966
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 77 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 196
LF D SS+ RKD+++T I+ I G G + + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,698,215
Number of Sequences: 237096
Number of extensions: 929868
Number of successful extensions: 1741
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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