BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A11
(322 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 25 0.30
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 24 0.52
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 1.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 1.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 1.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 1.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 1.6
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 22 2.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 8.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 8.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 8.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 8.4
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 8.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 8.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 8.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 8.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 8.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 8.4
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 8.4
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 8.4
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 20 8.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 8.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 8.4
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.6 bits (51), Expect = 0.30
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = -1
Query: 205 EVPPPAF*CYARLGPRPLFSVFYFSAVQPPFRKLS-SSLVMRFTTP 71
++P P Y PRP+ S P FR + S+L RF P
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTLFPRFIPP 156
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 23.8 bits (49), Expect = 0.52
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +1
Query: 109 YEKEAEQQKNRIQKIKDEGQD--EHNIRKQEEVLQESLMMVPDCQRRL 246
YE+ +E+ RI EG+D ++ R E+ ++ ++ + +RL
Sbjct: 349 YEQPSEEDLKRITNQPSEGEDISDYKFRHITEITILTVQLIVEFSKRL 396
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 1.6
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 205 EVPPPAF*CYARLGPRPLFSVFYFSAVQPPFRKLSSSLVM-RFTTP 71
++P P Y PRP+ S P FR + S RF P
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 1.6
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 205 EVPPPAF*CYARLGPRPLFSVFYFSAVQPPFRKLSSSLVM-RFTTP 71
++P P Y PRP+ S P FR + S RF P
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 1.6
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 205 EVPPPAF*CYARLGPRPLFSVFYFSAVQPPFRKLSSSLVM-RFTTP 71
++P P Y PRP+ S P FR + S RF P
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 1.6
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 205 EVPPPAF*CYARLGPRPLFSVFYFSAVQPPFRKLSSSLVM-RFTTP 71
++P P Y PRP+ S P FR + S RF P
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 22.2 bits (45), Expect = 1.6
Identities = 14/46 (30%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = -1
Query: 205 EVPPPAF*CYARLGPRPLFSVFYFSAVQPPFRKLSSSLVM-RFTTP 71
++P P Y PRP+ S P FR + S RF P
Sbjct: 111 QIPVPVPVYYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 21.8 bits (44), Expect = 2.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 299 LRFCSVSNMFLRSVNAFANL 240
L C V N+ RSVN F ++
Sbjct: 12 LIMCGVQNLRARSVNIFQDI 31
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIA 321
++KNIL + EH +A
Sbjct: 175 EIKNILNKTNEITEHRTVLA 194
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIA 321
++KNIL + EH +A
Sbjct: 175 EIKNILNKTNEITEHRTVLA 194
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIA 321
++KNIL + EH +A
Sbjct: 175 EIKNILNKTNEITEHRTVLA 194
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIA 321
++KNIL + EH +A
Sbjct: 175 EIKNILNKTNEITEHRTVLA 194
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIA 321
++KNIL + EH +A
Sbjct: 175 EIKNILNKTNEITEHRTVLA 194
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIA 321
++KNIL + EH +A
Sbjct: 175 EIKNILNKTNEITEHRTVLA 194
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIA 321
++KNIL + EH +A
Sbjct: 175 EIKNILNKTNEITEHRTVLA 194
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.8 bits (39), Expect = 8.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 262 DLKNILETEQNLKEHE 309
++KN+L +KEH+
Sbjct: 178 EIKNVLTKINKIKEHD 193
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.8 bits (39), Expect = 8.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 262 DLKNILETEQNLKEHE 309
++KN+L +KEH+
Sbjct: 178 EIKNVLTKINKIKEHD 193
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.8 bits (39), Expect = 8.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 262 DLKNILETEQNLKEHE 309
++KN+L +KEH+
Sbjct: 178 EIKNVLTKINKIKEHD 193
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.8 bits (39), Expect = 8.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 262 DLKNILETEQNLKEHE 309
++KN+L +KEH+
Sbjct: 167 EIKNVLTKINKIKEHD 182
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 19.8 bits (39), Expect = 8.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 262 DLKNILETEQNLKEHE 309
++KN+L +KEH+
Sbjct: 183 EIKNVLTKINKIKEHD 198
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 19.8 bits (39), Expect = 8.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 262 DLKNILETEQNLKEHE 309
++KN+L +KEH+
Sbjct: 178 EIKNVLTKINKIKEHD 193
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +1
Query: 262 DLKNILETEQNLKEHEDYIA 321
++KNIL + EH +A
Sbjct: 175 EIKNILNKTNEITEHRTVLA 194
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 19.8 bits (39), Expect = 8.4
Identities = 6/16 (37%), Positives = 11/16 (68%)
Frame = +1
Query: 262 DLKNILETEQNLKEHE 309
++KN+L +KEH+
Sbjct: 178 EIKNVLTKINKIKEHD 193
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,310
Number of Sequences: 438
Number of extensions: 1300
Number of successful extensions: 23
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6968808
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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