Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A08
(390 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical ... 41 3e-04
AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical ... 38 0.002
AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical ... 32 0.17
U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical p... 29 1.5
AF024503-10|AAG24095.1| 399|Caenorhabditis elegans Hypothetical... 29 1.5
Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical p... 28 2.0
U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein. 28 2.0
U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical pr... 28 2.0
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 27 3.6
AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical ... 27 3.6
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr... 27 4.7
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 27 4.7
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 27 4.7
AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical ... 27 6.2
AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical ... 27 6.2
AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPas... 27 6.2
AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane cal... 27 6.2
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 26 8.2
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 26 8.2
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 26 8.2
Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical p... 26 8.2
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 26 8.2
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 26 8.2
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 26 8.2
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 26 8.2
AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical ... 26 8.2
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 26 8.2
>AF040642-9|AAB94950.1| 589|Caenorhabditis elegans Hypothetical
protein C50D2.2 protein.
Length = 589
Score = 41.1 bits (92), Expect = 3e-04
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +3
Query: 63 IGTLLAYTLVSTCVLVLRYQP 125
IGTLLAY++VS CV+VLRYQP
Sbjct: 394 IGTLLAYSIVSACVIVLRYQP 414
>AF024493-5|AAB70324.1| 583|Caenorhabditis elegans Hypothetical
protein F23F1.6 protein.
Length = 583
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +3
Query: 63 IGTLLAYTLVSTCVLVLRYQPH 128
IGTLLAY++VS CV++LR+Q H
Sbjct: 395 IGTLLAYSMVSICVIILRHQSH 416
>AF025452-2|AAB70943.1| 585|Caenorhabditis elegans Hypothetical
protein B0454.6 protein.
Length = 585
Score = 31.9 bits (69), Expect = 0.17
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 63 IGTLLAYTLVSTCVLVLRYQ 122
IGTL AY+ VS VLVLRYQ
Sbjct: 394 IGTLFAYSFVSGSVLVLRYQ 413
>U28739-11|AAR25657.1| 487|Caenorhabditis elegans Hypothetical
protein C17G10.6b protein.
Length = 487
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 151 YPTASEHRSIPRELPLQTGKLHIRASFKETSKPVTNAS 264
+PT + ++P P GK+ +R+ K SK V N+S
Sbjct: 449 FPTVTTTTTMPPSYPYYPGKIGVRSISKPLSKNVFNSS 486
>AF024503-10|AAG24095.1| 399|Caenorhabditis elegans Hypothetical
protein F31F4.12 protein.
Length = 399
Score = 28.7 bits (61), Expect = 1.5
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 254 VTGLDVSLKLARICSFPVCSGSSLGIDRC 168
V+ ++S K +IC C G+ G+D C
Sbjct: 6 VSSTEISHKTCQICKVEKCHGNHFGVDSC 34
>Z98866-11|CAB11564.2| 335|Caenorhabditis elegans Hypothetical
protein Y49E10.14 protein.
Length = 335
Score = 28.3 bits (60), Expect = 2.0
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +2
Query: 107 SSALPTAHHQPDRTATPQPQNTGRSRGNCH-CKPGNCIFGPASR-------KHPNR*PTH 262
SS+ + HH +R + ++ R R CH + GNC +GP R +H N T
Sbjct: 163 SSSSASKHHDENRRPSNNHGSSNR-RQICHNFERGNCRYGPRCRFIHVEQMQHFNANATV 221
Query: 263 HGPPS 277
+ PPS
Sbjct: 222 YAPPS 226
>U62896-1|AAB17868.1| 335|Caenorhabditis elegans PIE-1 protein.
Length = 335
Score = 28.3 bits (60), Expect = 2.0
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Frame = +2
Query: 107 SSALPTAHHQPDRTATPQPQNTGRSRGNCH-CKPGNCIFGPASR-------KHPNR*PTH 262
SS+ + HH +R + ++ R R CH + GNC +GP R +H N T
Sbjct: 163 SSSSASKHHDENRRPSNNHGSSNR-RQICHNFERGNCRYGPRCRFIHVEQMQHFNANATV 221
Query: 263 HGPPS 277
+ PPS
Sbjct: 222 YAPPS 226
>U23486-7|AAC46775.1| 428|Caenorhabditis elegans Hypothetical
protein F07F6.1 protein.
Length = 428
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +2
Query: 2 HEVTLSAIRVAPPRPWFLKNHRHSSGL----HLSIYLRVSSALPTAHHQPDRT 148
H++++ + V PP WFL +R L HL+ Y L PD T
Sbjct: 114 HDISIQDVVVVPPAKWFLNFYRPEDALKVMKHLNGYSYRGHILAVRFCYPDGT 166
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 287 PASDSADHDALVTGLDV-SLKLARICSFPVCSGSSLGIDRCSEA 159
P+ + A VT D+ SLKLA F + G I+RC EA
Sbjct: 464 PSKEEQLEIATVTEQDLKSLKLAEKLDFEIVDGMESEIERCYEA 507
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 287 PASDSADHDALVTGLDV-SLKLARICSFPVCSGSSLGIDRCSEA 159
P+ + A VT D+ SLKLA F + G I+RC EA
Sbjct: 464 PSKEEQLEIATVTEQDLKSLKLAEKLDFEIVDGMESEIERCYEA 507
>AL110499-1|CAB57912.1| 325|Caenorhabditis elegans Hypothetical
protein Y62F5A.1a protein.
Length = 325
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +2
Query: 125 AHHQPDRTATPQPQNTGRSRGNCHCKPGNCIFGPASRKHPNR*PTHHGPPS 277
+HHQ + + QP N PG I P ++ P P H PP+
Sbjct: 272 SHHQQPQYSHQQPMNPQHHSPMTMMAPGQMIGHPIQQQRP---PMHQMPPN 319
>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical
protein F17C8.1 protein.
Length = 1253
Score = 27.1 bits (57), Expect = 4.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 124 RTPPT*SNCYPTASEHRSIPRELPL 198
RTP +C P+ H S PR +PL
Sbjct: 8 RTPALGGSCGPSVRAHSSSPRRVPL 32
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 213 QFPGLQWQFPRDRPVF*GCGVAVRSGWWCAVG 118
+FPG Q + P R ++ G G SGW+ G
Sbjct: 191 RFPGAQGRMPGGRGMYGGRGGNNNSGWYAGWG 222
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -1
Query: 213 QFPGLQWQFPRDRPVF*GCGVAVRSGWWCAVG 118
+FPG Q + P R ++ G G SGW+ G
Sbjct: 191 RFPGAQGRMPGGRGMYGGRGGNNNSGWYAGWG 222
>AL110471-3|CAB63308.1| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 284 ASDSADHDALVTGLDVSLKLARICSFPVCSGSSLGI 177
AS+S+DHDA++ L +S K + + SG SLG+
Sbjct: 116 ASESSDHDAMIAKL-LSRKFSIPMEGYMLSGRSLGL 150
>AL034364-6|CAA22254.2| 818|Caenorhabditis elegans Hypothetical
protein W06D4.6 protein.
Length = 818
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 284 ASDSADHDALVTGLDVSLKLARICSFPVCSGSSLGI 177
AS+S+DHDA++ L +S K + + SG SLG+
Sbjct: 116 ASESSDHDAMIAKL-LSRKFSIPMEGYMLSGRSLGL 150
>AJ010646-1|CAA09303.1| 1237|Caenorhabditis elegans calcium ATPase
protein.
Length = 1237
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +2
Query: 119 PTAHHQPDRTATPQPQ---NTGRSRGN 190
P HHQ RT +PQP G S GN
Sbjct: 1149 PYYHHQQPRTPSPQPHIVVENGTSSGN 1175
>AC025724-13|AAK68551.1| 1234|Caenorhabditis elegans Membrane calcium
atpase protein3, isoform b protein.
Length = 1234
Score = 26.6 bits (56), Expect = 6.2
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +2
Query: 119 PTAHHQPDRTATPQPQ---NTGRSRGN 190
P HHQ RT +PQP G S GN
Sbjct: 1149 PYYHHQQPRTPSPQPHIVVENGTSSGN 1175
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 117 TVSPAPGNCCPPPGSCHCDQKKCV 140
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>Z71178-16|CAD44088.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 117 TVSPAPGNCCPPPGSCHCDQKKCV 140
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>AL021478-2|CAF32232.1| 328|Caenorhabditis elegans Hypothetical
protein B0024.14c protein.
Length = 328
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.2 bits (55), Expect = 8.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +2
Query: 146 TATPQPQNTGRSRGNCHCKPGNCI 217
T +P P N G+CHC C+
Sbjct: 51 TVSPAPGNCCPPPGSCHCDQKKCV 74
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,884,162
Number of Sequences: 27780
Number of extensions: 220859
Number of successful extensions: 657
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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