Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_A05
         (104 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    20   3.2  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    19   4.3  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    19   5.6  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    19   5.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    19   5.6  

>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 19.8 bits (39), Expect = 3.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 48  AYGPLFXLYVTTNAS 4
           +YG LF +YV  +A+
Sbjct: 129 SYGTLFFIYVQPSAT 143


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 19.4 bits (38), Expect = 4.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 48  AYGPLFXLYVTTNAS 4
           +YG LF +YV  +A+
Sbjct: 130 SYGTLFFIYVHPSAT 144


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
          protein.
          Length = 157

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 50 ARTGHCSSCMLPRTPR 3
          A  GHCS   LP  PR
Sbjct: 38 AVNGHCSHLCLP-APR 52


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
          protein.
          Length = 128

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 50 ARTGHCSSCMLPRTPR 3
          A  GHCS   LP  PR
Sbjct: 38 AVNGHCSHLCLP-APR 52


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 5/12 (41%), Positives = 10/12 (83%)
 Frame = +1

Query: 13   RGNIQLEQWPVR 48
            +GN+Q + WP++
Sbjct: 1015 KGNMQWKIWPMK 1026


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,213
Number of Sequences: 438
Number of extensions: 279
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 15
effective length of database: 139,773
effective search space used:  2655687
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)