Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0020_A03
         (277 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   0.70 
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   2.8  
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    20   6.5  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.0 bits (47), Expect = 0.70
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = -2

Query: 270 IHKLVVGGVGRVAHMYYIQVKQPEPLVRHSLISFRT**SCQLVNQSASQYLFGSSHSTPN 91
           + K++ G VG  + +  IQV     L R  L+SF +  S +L N+   +Y    + + P+
Sbjct: 208 VRKVISGVVGAASSVTSIQVANLLRLFRIPLVSFFS-TSPELSNKQRFEYF---TRTIPS 263

Query: 90  LHLQ 79
            H Q
Sbjct: 264 DHYQ 267


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/36 (22%), Positives = 17/36 (47%)
 Frame = -3

Query: 203 RSHSFVIHLYPFAHNNRANSSINRLLNISLDQVTQH 96
           +   F+  ++PF       ++I    N ++ Q+ QH
Sbjct: 142 KKREFMQKIWPFKEYQMNGNNITNFKNSNIFQLKQH 177


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 112 SKEILRSRLIDELAR 156
           S ++LR R++ ELAR
Sbjct: 16  SMDVLRQRVLLELAR 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,965
Number of Sequences: 438
Number of extensions: 1549
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5388717
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)