Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0020_A02
(274 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0015 + 10191793-10191957,10192085-10192229,10192331-101924... 91 1e-19
02_01_0160 + 1116160-1116678 90 3e-19
06_03_1340 + 29455210-29455290,29455493-29455571,29455767-294558... 87 2e-18
05_01_0022 + 154399-154428,154528-154716,155469-155619,155724-15... 87 2e-18
09_06_0098 + 20850535-20850612,20851258-20851333,20851474-208515... 85 7e-18
06_03_1341 + 29458085-29458198,29458448-29458526,29458923-294589... 85 7e-18
09_06_0359 + 22508900-22509439 85 1e-17
03_06_0417 - 33782577-33782687,33782996-33783052,33783110-337832... 77 1e-15
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 74 2e-14
10_01_0309 + 3417602-3418147 73 2e-14
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 66 3e-12
06_01_0798 - 5944815-5944888,5945084-5945243,5945319-5945356,594... 58 1e-09
02_05_0830 + 32066419-32066676,32067779-32067820,32068375-320688... 57 2e-09
03_02_0048 - 5265595-5265783,5265882-5265992,5266259-5266547,526... 55 9e-09
06_01_0214 + 1634171-1634173,1634263-1634742 47 2e-06
01_01_0077 - 585670-585787,585921-586687 44 1e-05
08_02_1578 - 27992848-27992893,27993431-27993515,27994107-279942... 41 1e-04
01_05_0478 - 22587881-22588021,22588126-22588266,22588436-225886... 40 2e-04
06_03_1076 + 27409107-27409204,27409731-27409835,27409915-274100... 38 8e-04
08_02_1563 + 27886202-27886446,27886533-27886618,27886942-278870... 37 0.002
07_03_0359 - 17201711-17201803,17202185-17202332,17202437-172025... 37 0.003
10_01_0310 + 3425099-3425218 36 0.004
08_02_0053 + 11721658-11721689,11721960-11722710 36 0.004
06_03_1075 + 27399279-27399376,27399449-27399555,27400791-274008... 35 0.008
02_01_0086 + 613113-613532 34 0.018
11_06_0211 + 21305535-21305895,21306512-21306761,21307543-213076... 28 0.89
06_03_0420 + 20593468-20593719,20594534-20594581,20595155-20595970 26 3.6
05_06_0156 - 26031463-26031572,26031961-26032039,26032133-260322... 26 3.6
01_02_0099 + 11092529-11093140,11094153-11094424,11095378-110954... 26 4.7
12_02_0692 - 22197582-22198214,22198761-22198935,22199089-221991... 25 6.3
11_01_0799 + 7035380-7036148,7036587-7037080 25 6.3
09_02_0357 + 7788946-7789326,7789620-7789997 25 6.3
05_07_0261 + 28764571-28764733,28766039-28766153,28766241-287663... 25 6.3
01_06_0862 - 32532905-32533076,32534289-32534848 25 6.3
12_01_0979 - 9914779-9915327,9915409-9915536,9915947-9916050,991... 25 8.3
12_01_0508 + 4027113-4028522 25 8.3
05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,816... 25 8.3
03_02_0952 + 12666750-12666777,12666965-12667185,12669464-126696... 25 8.3
02_05_1332 + 35758657-35758728,35758959-35760689 25 8.3
>01_02_0015 +
10191793-10191957,10192085-10192229,10192331-10192419,
10193009-10193063,10193607-10193692,10194006-10194065
Length = 199
Score = 91.1 bits (216), Expect = 1e-19
Identities = 38/59 (64%), Positives = 47/59 (79%)
Frame = +1
Query: 97 FFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 273
FFDV G P GRIV+ L +V PKT +NFRALCTG+KG+GYKG +FHR+I +FM+QGG
Sbjct: 69 FFDVEVGGEPAGRIVIGLFGEVVPKTVDNFRALCTGDKGYGYKGCSFHRIIKDFMIQGG 127
>02_01_0160 + 1116160-1116678
Length = 172
Score = 89.8 bits (213), Expect = 3e-19
Identities = 44/67 (65%), Positives = 48/67 (71%), Gaps = 7/67 (10%)
Frame = +1
Query: 94 VFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFHRVIP 252
VFFD+T G+P GRIV+EL P+T ENFRALCTGEKG G YKGSTFHRVIP
Sbjct: 6 VFFDMTVGGAPAGRIVMELYAKDVPRTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIP 65
Query: 253 NFMLQGG 273
FM QGG
Sbjct: 66 EFMCQGG 72
>06_03_1340 +
29455210-29455290,29455493-29455571,29455767-29455814,
29455908-29455931,29456433-29456615,29456730-29456805,
29456937-29457072
Length = 208
Score = 87.0 bits (206), Expect = 2e-18
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 7/68 (10%)
Frame = +1
Query: 91 EVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFHRVI 249
+VFFD+T +G P GRIV+ L + PKT ENFRA+CTGEKG G YKG+ FHR+I
Sbjct: 41 KVFFDITINGKPAGRIVMGLFGNTVPKTAENFRAICTGEKGLGKSGKPLSYKGTPFHRII 100
Query: 250 PNFMLQGG 273
P FM+QGG
Sbjct: 101 PGFMIQGG 108
>05_01_0022 +
154399-154428,154528-154716,155469-155619,155724-155812,
156391-156445,156533-156618,156705-156857
Length = 250
Score = 87.0 bits (206), Expect = 2e-18
Identities = 39/67 (58%), Positives = 51/67 (76%), Gaps = 3/67 (4%)
Frame = +1
Query: 82 LCREVFFDVTAD---GSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIP 252
+ +V+FD++ G +GR+V+ L D P+T ENFRALCTGEKGFGYKGS+FHRVI
Sbjct: 81 ITNKVYFDISIGNPVGKNVGRVVIGLYGDDVPQTAENFRALCTGEKGFGYKGSSFHRVIK 140
Query: 253 NFMLQGG 273
+FM+QGG
Sbjct: 141 DFMIQGG 147
>09_06_0098 +
20850535-20850612,20851258-20851333,20851474-20851521,
20851758-20851781,20851875-20851994,20852235-20852310,
20852385-20852547
Length = 194
Score = 85.0 bits (201), Expect = 7e-18
Identities = 41/75 (54%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
Frame = +1
Query: 70 KLKCLCREVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKG 228
+L + V+ DV DG +GRIV+ L DV PKT NFRALCTGE+G G YKG
Sbjct: 32 RLPAVTNRVYLDVEIDGQHIGRIVIGLYGDVVPKTVANFRALCTGEEGIGHKGKSLHYKG 91
Query: 229 STFHRVIPNFMLQGG 273
S FHR+IP FM+QGG
Sbjct: 92 SRFHRIIPGFMIQGG 106
>06_03_1341 +
29458085-29458198,29458448-29458526,29458923-29458970,
29459064-29459087,29459554-29459736,29459845-29459920,
29460020-29460158
Length = 220
Score = 85.0 bits (201), Expect = 7e-18
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 7/68 (10%)
Frame = +1
Query: 91 EVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFHRVI 249
+V+FDV DG P GR+V+ L PKT ENFRALCTGEKG G +KGS FHR+I
Sbjct: 52 KVYFDVEIDGKPAGRVVMGLFGKTVPKTAENFRALCTGEKGTGKSGKALHFKGSAFHRII 111
Query: 250 PNFMLQGG 273
P+FM+QGG
Sbjct: 112 PSFMIQGG 119
>09_06_0359 + 22508900-22509439
Length = 179
Score = 84.6 bits (200), Expect = 1e-17
Identities = 40/68 (58%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Frame = +1
Query: 91 EVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG-------YKGSTFHRVI 249
+VFFD+ + GR+V+EL D PKT ENFR LCTGEKG G YKGS FHR+I
Sbjct: 7 KVFFDILIGKARAGRVVMELFADTVPKTAENFRCLCTGEKGLGASGKPLHYKGSAFHRII 66
Query: 250 PNFMLQGG 273
PNFM QGG
Sbjct: 67 PNFMCQGG 74
>03_06_0417 -
33782577-33782687,33782996-33783052,33783110-33783205,
33783252-33783284,33783543-33783599,33783968-33784060,
33784308-33784395,33784812-33784835,33784956-33785164
Length = 255
Score = 77.4 bits (182), Expect = 1e-15
Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 5/65 (7%)
Frame = +1
Query: 94 VFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGE---KGF--GYKGSTFHRVIPNF 258
VFFDVT P GRI +EL D+ PKT ENFR CTGE G GYKG FHRVI +F
Sbjct: 39 VFFDVTIGSIPAGRIKMELFADIVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDF 98
Query: 259 MLQGG 273
M+QGG
Sbjct: 99 MIQGG 103
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 73.7 bits (173), Expect = 2e-14
Identities = 39/68 (57%), Positives = 42/68 (61%), Gaps = 8/68 (11%)
Frame = +1
Query: 94 VFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG--------YKGSTFHRVI 249
VF DV+ P R+V EL DV P+T ENFRALCTGE G G YKGS FHRVI
Sbjct: 9 VFMDVSIGDEPDERMVFELFADVAPRTAENFRALCTGEMGIGQTSKKPLYYKGSLFHRVI 68
Query: 250 PNFMLQGG 273
FM QGG
Sbjct: 69 KGFMAQGG 76
>10_01_0309 + 3417602-3418147
Length = 181
Score = 73.3 bits (172), Expect = 2e-14
Identities = 35/67 (52%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Frame = +1
Query: 94 VFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKG-------FGYKGSTFHRVIP 252
VF D+ G +GR+V+EL D P T ENFR LCTGE+ YKGS FHRV+P
Sbjct: 13 VFLDIAIGGEWVGRVVIELLADKVPDTAENFRRLCTGERAGRSGKSRLHYKGSAFHRVVP 72
Query: 253 NFMLQGG 273
FM QGG
Sbjct: 73 GFMCQGG 79
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 66.5 bits (155), Expect = 3e-12
Identities = 33/66 (50%), Positives = 39/66 (59%), Gaps = 8/66 (12%)
Frame = +1
Query: 94 VFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG--------YKGSTFHRVI 249
VFFD+ G RI EL DV PKT ENFRALCTGE+G G +KG+ HR++
Sbjct: 10 VFFDIAIGGRAAERITFELFADVVPKTTENFRALCTGERGLGVSTQKPLYFKGTNMHRIL 69
Query: 250 PNFMLQ 267
FM Q
Sbjct: 70 KGFMAQ 75
>06_01_0798 -
5944815-5944888,5945084-5945243,5945319-5945356,
5945438-5945513,5946114-5946218,5947486-5947986,
5948638-5948710,5949550-5949593,5949938-5950174
Length = 435
Score = 57.6 bits (133), Expect = 1e-09
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = +1
Query: 97 FFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG 219
F DV+ G GRIV+EL V P+T ENFRALCTGEKG G
Sbjct: 29 FMDVSIGGEIEGRIVIELYASVVPRTAENFRALCTGEKGVG 69
Score = 31.9 bits (69), Expect = 0.072
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 208 KGFGYKGSTFHRVIPNFMLQGG 273
K F +GS FHRVI FM+QGG
Sbjct: 113 KIFHVQGSCFHRVIKGFMVQGG 134
>02_05_0830 +
32066419-32066676,32067779-32067820,32068375-32068875,
32069048-32069135,32069251-32069303,32069499-32069603,
32069886-32069961,32070038-32070075,32070162-32070242,
32070353-32070364
Length = 417
Score = 57.2 bits (132), Expect = 2e-09
Identities = 35/81 (43%), Positives = 41/81 (50%), Gaps = 22/81 (27%)
Frame = +1
Query: 97 FFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFG------------------- 219
+ DV+ G GRIVVEL V P+T ENFRALCTGEKG
Sbjct: 36 YLDVSIGGDMEGRIVVELYASVAPRTAENFRALCTGEKGVSAATGVPLHYKISLKAASVC 95
Query: 220 ---YKGSTFHRVIPNFMLQGG 273
KGS HR++ FM+QGG
Sbjct: 96 TRWTKGSCIHRIVKGFMVQGG 116
>03_02_0048 -
5265595-5265783,5265882-5265992,5266259-5266547,
5266647-5266903,5266995-5267356,5267447-5267522,
5267618-5267707,5267800-5267891,5267995-5268098,
5268191-5268253,5268609-5268736
Length = 586
Score = 54.8 bits (126), Expect = 9e-09
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +1
Query: 130 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 273
G + +EL D+TP+TCENF C E G+ Y G FHR I NFM+QGG
Sbjct: 354 GDLNLELHCDITPRTCENFLTHC--ENGY-YNGLIFHRSIKNFMIQGG 398
>06_01_0214 + 1634171-1634173,1634263-1634742
Length = 160
Score = 47.2 bits (107), Expect = 2e-06
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = +1
Query: 127 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 273
LG I E+ D P+T ENF ALC G+ Y G+ FHR I FM+QGG
Sbjct: 9 LGDIKCEVFCDQAPRTAENFLALCA--SGY-YDGTIFHRNIKGFMIQGG 54
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 44.4 bits (100), Expect = 1e-05
Identities = 21/61 (34%), Positives = 31/61 (50%)
Frame = +1
Query: 91 EVFFDVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQG 270
+ F DV+ G P GRI + L D P F +L T G GY+ F +++P ++ G
Sbjct: 76 KAFLDVSIGGEPAGRITIGLFGDAAPAGASRFLSLVT---GVGYRRKEFVKIVPGYVQHG 132
Query: 271 G 273
G
Sbjct: 133 G 133
>08_02_1578 -
27992848-27992893,27993431-27993515,27994107-27994240,
27994579-27994640,27994736-27994831,27994952-27995023
Length = 164
Score = 41.1 bits (92), Expect = 1e-04
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 103 DVTADGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 273
+VT + S +G +E+ PKTC NF L +G+ Y FHR+I +F++QGG
Sbjct: 11 EVTLETS-MGAFTIEMYYKHAPKTCRNFLEL--SRRGY-YDNVIFHRIIKDFIVQGG 63
>01_05_0478 -
22587881-22588021,22588126-22588266,22588436-22588643,
22589199-22589238,22589425-22589647,22590826-22590970,
22591053-22591156,22591298-22591396,22591506-22591684,
22591948-22592167
Length = 499
Score = 40.3 bits (90), Expect = 2e-04
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +1
Query: 130 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 273
G + +EL PK NF LC +G+ Y G+ FHRVI +F++QGG
Sbjct: 22 GPLDIELWPKEAPKAVRNFVQLCL--EGY-YDGTLFHRVIKSFLVQGG 66
>06_03_1076 +
27409107-27409204,27409731-27409835,27409915-27410032,
27410180-27410230,27410328-27410419,27410558-27410657,
27411018-27411137,27411227-27411295,27411468-27411514,
27411597-27411652,27412293-27412333,27412570-27412675,
27413891-27414023,27414096-27414645
Length = 561
Score = 38.3 bits (85), Expect = 8e-04
Identities = 21/49 (42%), Positives = 28/49 (57%)
Frame = +1
Query: 127 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 273
+G I V+L TD+ P T +NF LC K Y G FH+V +F+ Q G
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLC---KMKYYNGCLFHKVEKDFLAQTG 54
>08_02_1563 +
27886202-27886446,27886533-27886618,27886942-27887030,
27887193-27887432,27887527-27887648,27888103-27888178,
27888276-27888383,27888465-27888641,27888959-27889176,
27889313-27889445,27889584-27889807,27890052-27890205,
27890297-27890380
Length = 651
Score = 37.1 bits (82), Expect = 0.002
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +1
Query: 127 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 273
+G I + L + PKT ENF C G+ Y FHRVI FM+Q G
Sbjct: 504 MGDIHLRLYPEECPKTVENFTTHC--RNGY-YDNLIFHRVIKGFMIQTG 549
>07_03_0359 -
17201711-17201803,17202185-17202332,17202437-17202574,
17204331-17204416,17205233-17205283,17205774-17205858,
17205930-17206081
Length = 250
Score = 36.7 bits (81), Expect = 0.003
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 130 GRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQGG 273
G I +E+ D + + F +LC K +KG F VI NF++QGG
Sbjct: 103 GSITIEIYKDASADVVDRFVSLC---KSNHFKGMPFRHVIKNFVIQGG 147
>10_01_0310 + 3425099-3425218
Length = 39
Score = 35.9 bits (79), Expect = 0.004
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 121 SPLGRIVVELRTDVTPKTCENFRALCTG 204
S G +V+E D PKT ENFR +CTG
Sbjct: 5 SRAGSVVIEQFADKVPKTTENFRPMCTG 32
>08_02_0053 + 11721658-11721689,11721960-11722710
Length = 260
Score = 35.9 bits (79), Expect = 0.004
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 115 DGSPLGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVI 249
D PLGR++ L + P T NF+A CT Y+G+ H+++
Sbjct: 123 DSEPLGRVIFGLYGRLLPLTTANFKAACTSA---AYRGTLVHKLL 164
>06_03_1075 +
27399279-27399376,27399449-27399555,27400791-27400898,
27401763-27401860,27401983-27402033,27402137-27402228,
27402360-27402459,27402765-27402884,27402977-27403045,
27403299-27403345,27403428-27403483,27404760-27404800,
27405155-27405260,27406728-27406860,27406937-27407357
Length = 548
Score = 35.1 bits (77), Expect = 0.008
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +1
Query: 127 LGRIVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFHR 243
+G I V+L TD+ P T +NF LC G +G G F +
Sbjct: 9 VGDIEVDLHTDMCPLTTKNFLKLCKGNEGLVAGGLAFRK 47
>02_01_0086 + 613113-613532
Length = 139
Score = 33.9 bits (74), Expect = 0.018
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 142 VELRTDVTPKTCENFRALCTGEKGFGYKGSTFHRVIPNFMLQG 270
+EL D+ P T ENFRAL T +K YKG + P ++G
Sbjct: 1 MELYADLVPLTAENFRALYT-KKPLHYKGLCLSQHYPRIHVEG 42
>11_06_0211 +
21305535-21305895,21306512-21306761,21307543-21307652,
21308836-21309067,21310233-21310603,21311434-21311507,
21311727-21311880,21312251-21312434,21313066-21313291,
21313704-21314135,21314399-21314456,21314748-21314829,
21315350-21315421,21316594-21316737,21317379-21317457,
21318023-21318105,21318198-21318252,21318488-21318778
Length = 1085
Score = 28.3 bits (60), Expect = 0.89
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 273 TTLQHEVGD-DTVESGAFVAEALLASTESSEVFTGLRSDVSSQLYNNPSQ 127
TTL E D DT++ F+ + ++ + +GLR +L++N S+
Sbjct: 631 TTLPDENHDSDTIDGDLFILKRIMVERGRAAYLSGLREKYFGELFSNASR 680
>06_03_0420 + 20593468-20593719,20594534-20594581,20595155-20595970
Length = 371
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +1
Query: 73 LKCLCREVFFDVTADGSPLGRIVVELRTDVTPKTC 177
LK LC E + V DG+ +++ + + P TC
Sbjct: 64 LKALCNEAGWTVEPDGTTYRKVIDKYEHNRVPLTC 98
>05_06_0156 -
26031463-26031572,26031961-26032039,26032133-26032261,
26032362-26032559,26032741-26032900,26032980-26033147,
26033290-26033405,26033491-26033586,26033675-26034058,
26035150-26035572,26037202-26037315,26037969-26038017,
26038103-26038262,26038345-26039014
Length = 951
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 194 RARKFSQVLGVTSVLS-STTILPNGDPSAVTSKKTSRQR 81
RAR+FSQ L + STT P G SA+ ++ RQR
Sbjct: 130 RARQFSQDLTKRFTRTQSTTTAPPGIESALAARAERRQR 168
>01_02_0099 +
11092529-11093140,11094153-11094424,11095378-11095438,
11095553-11095622,11095645-11095901,11096466-11096639
Length = 481
Score = 25.8 bits (54), Expect = 4.7
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 225 RLHFPPCHPQLHA 263
RL+ PPCH ++HA
Sbjct: 11 RLYLPPCHVRVHA 23
>12_02_0692 -
22197582-22198214,22198761-22198935,22199089-22199185,
22199359-22199473,22199546-22199633,22199972-22200063,
22200138-22200629,22201025-22201048,22201348-22203489
Length = 1285
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 185 SELSVLARRASATKAPLSTVSSP 253
SEL+ L RR+S T + ST +SP
Sbjct: 31 SELAALHRRSSGTSSSSSTSTSP 53
>11_01_0799 + 7035380-7036148,7036587-7037080
Length = 420
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -3
Query: 191 ARKFSQVLGVTSVLSSTTILPNGD 120
A+K ++ G+T++LSS +IL D
Sbjct: 340 AKKLKELAGITNLLSSGSILKESD 363
>09_02_0357 + 7788946-7789326,7789620-7789997
Length = 252
Score = 25.4 bits (53), Expect = 6.3
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = -3
Query: 272 PPCSMKLGMTRWKVEPL*PKPFSP 201
PPCS + R PL P P P
Sbjct: 148 PPCSRSVAAPRASTSPLRPSPVPP 171
>05_07_0261 +
28764571-28764733,28766039-28766153,28766241-28766344,
28766571-28766698,28766765-28767328
Length = 357
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 249 DDTVESGAFVAEALLAS-TESSEVFTGLRSDVSSQLY 142
DD + + +LLAS T S+ +F+G+ + + Q+Y
Sbjct: 199 DDYLLKSYYKTASLLASSTRSAAIFSGVSTTICEQMY 235
>01_06_0862 - 32532905-32533076,32534289-32534848
Length = 243
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 166 PKTCENFRALCTGEKGFGYKGSTFHRVIPN 255
PKT E+ A G+ G GY+G F + N
Sbjct: 163 PKTAESGTAGLAGKGGDGYQGRIFQELDEN 192
>12_01_0979 -
9914779-9915327,9915409-9915536,9915947-9916050,
9919832-9919946,9921036-9921528
Length = 462
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = -2
Query: 219 AEALLASTESSEVFTGLRSDVSSQLY 142
A + AST S+ +F+G+ + + Q+Y
Sbjct: 315 ASLIAASTRSAAIFSGVSTAICEQMY 340
>12_01_0508 + 4027113-4028522
Length = 469
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 136 IVVELRTDVTPKTCENFRALCTGEKGFGYKGSTFH 240
I V++R + K+C+N+ GEK GYKG +F+
Sbjct: 429 IAVDMRAK-SVKSCKNYPK---GEKEDGYKGLSFN 459
>05_03_0076 +
8164466-8164511,8164643-8164698,8165529-8165867,
8165938-8166012,8166674-8166846,8168697-8168795,
8169002-8169161,8169321-8169464,8169551-8169723,
8169796-8169991,8170061-8170258,8170864-8171016,
8171838-8171959,8172037-8172136,8172221-8172316,
8172400-8172530,8173717-8173819,8174373-8174555,
8174632-8174724,8174818-8174853,8175672-8175773,
8176310-8176472,8176557-8176678,8176994-8177158,
8177667-8177849,8178679-8178831,8179136-8179288,
8179373-8179444,8179530-8179664,8179739-8179800,
8179999-8180096,8180628-8180737,8180832-8181005,
8181092-8181157,8181847-8181915,8181989-8182099,
8182418-8182558,8182638-8182766,8182864-8183029,
8183174-8183388,8184883-8185089,8185501-8185572,
8185897-8186010,8186090-8186281,8186489-8186569,
8186654-8186728,8186812-8186878,8187292-8187452,
8187943-8188116,8188209-8188337,8188421-8188504,
8188589-8188650,8188728-8188800,8189008-8189142,
8189790-8189960,8190054-8190319,8190440-8190458
Length = 2448
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 222 VAEALLASTESSEVFTGLRSDVSSQLYNNPS 130
V + L+A+ ++V G+RS V LY NPS
Sbjct: 555 VEKLLMAAVADADV--GVRSSVFKALYRNPS 583
>03_02_0952 +
12666750-12666777,12666965-12667185,12669464-12669649,
12670147-12670212,12670335-12670427,12670528-12670659,
12670794-12670895,12670993-12671070,12671148-12671219,
12672185-12672292,12672368-12672465,12672904-12672964,
12673058-12673120,12673228-12673284,12673571-12673729,
12674310-12674441,12674516-12674602,12674667-12674738,
12675899-12675985,12676052-12676427,12676727-12676788,
12676946-12677014,12677096-12677142,12677189-12677342,
12677874-12677999
Length = 911
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 139 VVELRTDVTPKTCENFRALCTGEK 210
V +LR + PK+C LCT ++
Sbjct: 413 VAQLRIIIKPKSCNGVGPLCTAQQ 436
>02_05_1332 + 35758657-35758728,35758959-35760689
Length = 600
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 252 GDDTVESGAFVAEALLASTESSEVFTGLRSDVSSQ 148
GDD E+G + E + + S+V TG D + Q
Sbjct: 185 GDDLAENGVEMGEFVREPSPGSDVLTGGADDNTEQ 219
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,560,841
Number of Sequences: 37544
Number of extensions: 134743
Number of successful extensions: 379
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 14,793,348
effective HSP length: 69
effective length of database: 12,202,812
effective search space used: 256259052
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -