Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P22
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   1.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 572 PESASAPSTPRHAPRTSSAPNTTAPRTNTRSA 477
           P  A  P+TP H    SS+ + +   T T +A
Sbjct: 113 PRPAEVPTTPEHKSAASSSCSLSTLETQTATA 144


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 339  KSLPIVEPSALEAPEEGHAAQCSCPNCDELLSRFSECSICLEPL 470
            +SLP+  PS   A +    A  SCP  D L    SE ++ L+ +
Sbjct: 1364 RSLPLTPPSVPYASDRPPVATFSCP--DGLAHALSEQNLRLQQI 1405


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +3

Query: 339  KSLPIVEPSALEAPEEGHAAQCSCPNCDELLSRFSECSICLEPL 470
            +SLP+  PS   A +    A  SCP  D L    SE ++ L+ +
Sbjct: 1361 RSLPLTPPSVPYASDRPPVATFSCP--DGLAHALSEQNLRLQQI 1402


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,247
Number of Sequences: 2352
Number of extensions: 10647
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)