Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P21
         (571 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.53 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   1.6  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   2.8  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   4.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    21   6.5  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          21   6.5  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   6.5  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   6.5  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   8.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.6  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   8.6  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 13/52 (25%), Positives = 26/52 (50%)
 Frame = +1

Query: 259 ADTPDIKAIREKEKSDWRKLTLEEKKALYRASFCQTYSEFQAPTGEWKGVVG 414
           +D  +++ ++  + S WRKL    +  ++   F QTY + + P  +  G  G
Sbjct: 437 SDVVELQPVKSSKSSGWRKL----RNIVHWTPFFQTYKKQRYPWVQLAGHQG 484


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 175 REWVGYGLNGQPNYVDRADFPMPAIRFRADTPDIKAIREKEKSDWRK--LTLEEK 333
           R W GY  N   N V+           + +  D+  + E+EK+DW K  + L EK
Sbjct: 306 RPWQGYMTNNGVNNVEAV---------QKELTDLGKLGEEEKADWWKDIMLLNEK 351


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 175 REWVGYGLNGQPNYVDRADFPMPAIRFRADTPDIKAIREKEKSDWRK--LTLEEK 333
           R W GY  N   N V+           + +  D+  + E+EK+DW K  + L EK
Sbjct: 306 RPWQGYMTNNGVNNVEAV---------QKELTDLGKLGEEEKADWWKDIMLLNEK 351


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = +1

Query: 175 REWVGYGLNGQPNYVDRADFPMPAIRFRADTPDIKAIREKEKSDWRK--LTLEEK 333
           R W GY  N   N V+           + +  D+  + E+EK+DW K  + L EK
Sbjct: 306 RPWQGYMTNNGVNNVEAV---------QKELTDLGKLGEEEKADWWKDIMLLNEK 351


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 300 LLLLTDCLNIRSVRTESNSRHGKVSP 223
           L  LTDCL     + ESN +   +SP
Sbjct: 168 LTTLTDCLRSELAQCESNIKVISISP 193


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 61 KCVFFFRKVNLITSTNMT 8
          +C FFF  V LITS  +T
Sbjct: 6  RCTFFFLSVILITSYFVT 23


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 286 REKEKSDWRKLTLEEKKALYRASFCQT 366
           RE+ + DW+++ L   +AL    F  T
Sbjct: 414 RERMEFDWKQVALVSDRALLCVFFLTT 440


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +3

Query: 330 EESSLPSF--ILPDIFRVPGPHRRMEG 404
           E+++L S   +L +++  PGPH    G
Sbjct: 394 EDNALASHNNLLNNVYSTPGPHHHTMG 420


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 330 EESSLPSFILPDIFRVPGPHRRMEGSCGLGSVD 428
           E   LP  +   I  VP P R +EGS    S D
Sbjct: 41  EVDPLPFGVENTISSVPQPPRSLEGSYDSSSGD 73


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 512 WCSSSNVTGSGLYTNNFIPMK 450
           W  ++N++   LY N ++P K
Sbjct: 116 WNPNTNISEDCLYLNIWVPQK 136


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 512 WCSSSNVTGSGLYTNNFIPMK 450
           W  ++N++   LY N ++P K
Sbjct: 116 WNPNTNISEDCLYLNIWVPQK 136


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 116 YLPAPGPDHLQLEKSLKL 169
           Y+P P P H +L +  +L
Sbjct: 76  YIPQPRPPHPRLRREAEL 93



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 116 YLPAPGPDHLQLEKSLKL 169
           Y+P P P H +L +  +L
Sbjct: 132 YIPQPRPPHPRLRREAEL 149



 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 116 YLPAPGPDHLQLEKSLK 166
           Y+P P P H +L +  K
Sbjct: 244 YIPQPRPPHPRLRREAK 260


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 444 LDFHGNEVICVQPAARDV 497
           LD  GNE+  V  A RD+
Sbjct: 436 LDLSGNELTSVPDALRDL 453


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 116 YLPAPGPDHLQLEKSLK 166
           Y+P P P H +L +  K
Sbjct: 132 YIPQPRPPHPRLRREAK 148


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,778
Number of Sequences: 438
Number of extensions: 3699
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)