BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P19
(570 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX640826-1|CAE45902.1| 135|Homo sapiens hypothetical protein pr... 35 0.23
BC046645-1|AAH46645.1| 215|Homo sapiens CCBE1 protein protein. 35 0.23
AY358347-1|AAQ88713.1| 406|Homo sapiens VPPP1921 protein. 35 0.23
AB075863-1|BAB85569.1| 418|Homo sapiens KIAA1983 protein protein. 35 0.23
AF233523-1|AAF65317.1| 3674|Homo sapiens beta V spectrin protein. 33 0.54
AK131414-1|BAD18561.1| 493|Homo sapiens protein ( Homo sapiens ... 33 0.71
AF163762-1|AAG35563.1| 1077|Homo sapiens zinc metalloendopeptida... 33 0.71
AB209515-1|BAD92752.1| 847|Homo sapiens a disintegrin-like and ... 33 0.71
BX641102-1|CAE46047.1| 685|Homo sapiens hypothetical protein pr... 31 3.8
BX538046-1|CAD97985.1| 216|Homo sapiens hypothetical protein pr... 31 3.8
AJ315734-1|CAC86015.1| 1072|Homo sapiens metalloprotease disinte... 31 3.8
AB095949-1|BAC23125.1| 1021|Homo sapiens KIAA2029 protein protein. 31 3.8
BC042111-1|AAH42111.1| 522|Homo sapiens RASIP1 protein protein. 30 5.0
BC036844-1|AAH36844.1| 297|Homo sapiens SPTY2D1 protein protein. 30 5.0
AK096760-1|BAC04858.1| 627|Homo sapiens protein ( Homo sapiens ... 30 5.0
>BX640826-1|CAE45902.1| 135|Homo sapiens hypothetical protein
protein.
Length = 135
Score = 34.7 bits (76), Expect = 0.23
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 81 SLDLMLLMLADIRHDIQNLELRVYG 155
S D +LLMLADIR+DI L+ +V+G
Sbjct: 63 SFDFLLLMLADIRNDITELQEKVFG 87
>BC046645-1|AAH46645.1| 215|Homo sapiens CCBE1 protein protein.
Length = 215
Score = 34.7 bits (76), Expect = 0.23
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 81 SLDLMLLMLADIRHDIQNLELRVYG 155
S D +LLMLADIR+DI L+ +V+G
Sbjct: 143 SFDFLLLMLADIRNDITELQEKVFG 167
>AY358347-1|AAQ88713.1| 406|Homo sapiens VPPP1921 protein.
Length = 406
Score = 34.7 bits (76), Expect = 0.23
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 81 SLDLMLLMLADIRHDIQNLELRVYG 155
S D +LLMLADIR+DI L+ +V+G
Sbjct: 334 SFDFLLLMLADIRNDITELQEKVFG 358
>AB075863-1|BAB85569.1| 418|Homo sapiens KIAA1983 protein protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.23
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 81 SLDLMLLMLADIRHDIQNLELRVYG 155
S D +LLMLADIR+DI L+ +V+G
Sbjct: 346 SFDFLLLMLADIRNDITELQEKVFG 370
>AF233523-1|AAF65317.1| 3674|Homo sapiens beta V spectrin protein.
Length = 3674
Score = 33.5 bits (73), Expect = 0.54
Identities = 23/78 (29%), Positives = 33/78 (42%)
Frame = +3
Query: 195 WRRQRKQEKLDQETETGQELEAFTAPAVEGPVEISPHGRTGEIAHDESTSDWQQVKGETD 374
WR Q Q ET +A P +EG +E H G S+S W +G
Sbjct: 3509 WRPSGHQGLGAQLAETRDPQDAKGTPTMEGSLEFKQHLLPG--GRQPSSSSWDSCRGTLQ 3566
Query: 375 PVDLTLGLMDDKNALEKL 428
L+L +D++ A EK+
Sbjct: 3567 GSSLSL-FLDERMAAEKV 3583
>AK131414-1|BAD18561.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ16524 fis, clone OCBBF2003327, moderately
similar to ADAM-TS 6 precursor (EC 3.4.24.-). ).
Length = 493
Score = 33.1 bits (72), Expect = 0.71
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 507 RNYNRSRCPPNRRLRNWS-CCRTCDTGVVSQ 418
R N CPP+ + NWS C R+CD GV S+
Sbjct: 364 RACNTEPCPPDWVVGNWSLCSRSCDAGVRSR 394
>AF163762-1|AAG35563.1| 1077|Homo sapiens zinc metalloendopeptidase
protein.
Length = 1077
Score = 33.1 bits (72), Expect = 0.71
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 507 RNYNRSRCPPNRRLRNWS-CCRTCDTGVVSQ 418
R N CPP+ + NWS C R+CD GV S+
Sbjct: 851 RACNTEPCPPDWVVGNWSLCSRSCDAGVRSR 881
>AB209515-1|BAD92752.1| 847|Homo sapiens a disintegrin-like and
metalloprotease (reprolysin type) with thrombospondin ty
protein.
Length = 847
Score = 33.1 bits (72), Expect = 0.71
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 507 RNYNRSRCPPNRRLRNWS-CCRTCDTGVVSQ 418
R N CPP+ + NWS C R+CD GV S+
Sbjct: 631 RACNTEPCPPDWVVGNWSLCSRSCDAGVRSR 661
>BX641102-1|CAE46047.1| 685|Homo sapiens hypothetical protein
protein.
Length = 685
Score = 30.7 bits (66), Expect = 3.8
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Frame = +3
Query: 150 YGDGERPERFNLQKAWRRQRK-QEKLDQETETGQELEAFTAPAVEGPVEISPH-----GR 311
Y + P+R ++RQR+ +E+ D + E E+E F E EIS H G
Sbjct: 566 YRAAQGPQRLPFPTGYKRQREYEEEDDDDDEYDSEMEDFIEDEGEPQEEISKHIREIFGY 625
Query: 312 TGEIAHDES-------TSDWQQVKGETDPVDLTLGLMDDKNALEKLRQ 434
+ DES S W++ + E + L LG+ +D LE++R+
Sbjct: 626 DRKKYKDESDYALRYMESSWKEQQKE-EAKSLRLGMQED---LEEMRR 669
>BX538046-1|CAD97985.1| 216|Homo sapiens hypothetical protein
protein.
Length = 216
Score = 30.7 bits (66), Expect = 3.8
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Frame = +3
Query: 150 YGDGERPERFNLQKAWRRQRK-QEKLDQETETGQELEAFTAPAVEGPVEISPH-----GR 311
Y + P+R ++RQR+ +E+ D + E E+E F E EIS H G
Sbjct: 97 YRAAQGPQRLPFPTGYKRQREYEEEDDDDDEYDSEMEDFIEDEGEPQEEISKHIREIFGY 156
Query: 312 TGEIAHDES-------TSDWQQVKGETDPVDLTLGLMDDKNALEKLRQ 434
+ DES S W++ + E + L LG+ +D LE++R+
Sbjct: 157 DRKKYKDESDYALRYMESSWKEQQKE-EAKSLRLGMQED---LEEMRR 200
>AJ315734-1|CAC86015.1| 1072|Homo sapiens metalloprotease disintegrin
16 with thrombospondin type I motif protein.
Length = 1072
Score = 30.7 bits (66), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 492 SRCPPNRRLRNWSCC-RTCDTGVVSQ 418
S CPP+ + NWS C RTC G S+
Sbjct: 925 SACPPSWSVGNWSACSRTCGGGAQSR 950
>AB095949-1|BAC23125.1| 1021|Homo sapiens KIAA2029 protein protein.
Length = 1021
Score = 30.7 bits (66), Expect = 3.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 492 SRCPPNRRLRNWSCC-RTCDTGVVSQ 418
S CPP+ + NWS C RTC G S+
Sbjct: 722 SACPPSWSVGNWSACSRTCGGGAQSR 747
>BC042111-1|AAH42111.1| 522|Homo sapiens RASIP1 protein protein.
Length = 522
Score = 30.3 bits (65), Expect = 5.0
Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = +3
Query: 141 LRVYGDGERPERFNLQKAWRRQ----RKQEKLDQETETGQELEAFTAPAVEG 284
LRV GD ERP +Q+ WR + R+ E L +E E EAF A EG
Sbjct: 226 LRVLGDSERP--LLVQELWRARPGWARRFELLGREEARRLEQEAFGAADSEG 275
>BC036844-1|AAH36844.1| 297|Homo sapiens SPTY2D1 protein protein.
Length = 297
Score = 30.3 bits (65), Expect = 5.0
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Frame = +3
Query: 150 YGDGERPERFNLQKAWRRQRK-QEKLDQETETGQELEAFTAPAVEGPVEISPH-----GR 311
Y + P+R ++RQR+ +E+ D + E E+E F E EIS H G
Sbjct: 178 YRAAQGPQRLPFPTGYKRQREYEEEDDDDDEYDSEMEDFIEDEGEPQEEISRHIREIFGY 237
Query: 312 TGEIAHDES-------TSDWQQVKGETDPVDLTLGLMDDKNALEKLRQ 434
+ DES S W++ + E + L LG+ +D LE++R+
Sbjct: 238 DRKKYKDESDYALRYMESSWKEQQKE-EAKSLRLGMQED---LEEMRR 281
>AK096760-1|BAC04858.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ39441 fis, clone PROST2005793. ).
Length = 627
Score = 30.3 bits (65), Expect = 5.0
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 150 YGDGERPERFNLQKAWRRQRK-QEKLDQETETGQELEAFTAPAVEGPVEISPHGR 311
Y + P+R ++RQR+ +E+ D + E E+E F E EIS H R
Sbjct: 566 YRAAQGPQRLPFPTGYKRQREYEEEDDDDDEYDSEMEDFIEDEGEPQEEISKHIR 620
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,274,093
Number of Sequences: 237096
Number of extensions: 995722
Number of successful extensions: 2883
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2865
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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