Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P19
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058650-1|AAL13879.1|  513|Drosophila melanogaster LD35279p pro...    30   1.9  
AE014134-1737|AAF52837.1|  513|Drosophila melanogaster CG4709-PA...    30   1.9  
AY061170-1|AAL28718.1|  230|Drosophila melanogaster LD13807p pro...    29   3.3  
AY060856-1|AAL28404.1|  183|Drosophila melanogaster GM03203p pro...    29   3.3  
AE014298-915|AAF46178.1|  230|Drosophila melanogaster CG3226-PA ...    29   3.3  
X56689-1|CAA40017.1|  716|Drosophila melanogaster Protein on Ecd...    29   5.8  
BT001867-1|AAN71637.1|  502|Drosophila melanogaster SD02426p pro...    29   5.8  
AY118552-1|AAM49921.1|  693|Drosophila melanogaster LD34072p pro...    29   5.8  
AY118466-1|AAM49835.1|  485|Drosophila melanogaster GM02932p pro...    29   5.8  
AE014296-2942|AAF49317.3|  502|Drosophila melanogaster CG6143-PA...    29   5.8  
AE014296-2941|AAS64975.1|  693|Drosophila melanogaster CG6143-PC...    29   5.8  
AE014296-2940|AAF49319.3|  716|Drosophila melanogaster CG6143-PB...    29   5.8  
AE013599-989|AAF58861.1|  485|Drosophila melanogaster CG12128-PA...    29   5.8  
AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p pro...    28   7.7  
AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-P...    28   7.7  

>AY058650-1|AAL13879.1|  513|Drosophila melanogaster LD35279p
           protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
 Frame = +3

Query: 135 LELRVYGDGERPERFNLQKAWRR-QRKQEKLDQE--TETGQELEAFT--APAVEGPVEIS 299
           +ELR   +G++ + F++++  +R QR+Q K D++      Q ++ FT    +V GP E +
Sbjct: 357 MELREAANGDK-DYFSVERKLKRAQRRQRKADEKAYVRESQRVDVFTFLNDSVLGPGEST 415

Query: 300 PHGRTGEIAHDESTSDWQQVKGETDPVDLTLGLMDD 407
             G   ++     T++ QQ   +T  V+ T+ + D+
Sbjct: 416 QQGE--QVTKKAKTNELQQHSTKTLNVE-TVRIADE 448


>AE014134-1737|AAF52837.1|  513|Drosophila melanogaster CG4709-PA
           protein.
          Length = 513

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
 Frame = +3

Query: 135 LELRVYGDGERPERFNLQKAWRR-QRKQEKLDQE--TETGQELEAFT--APAVEGPVEIS 299
           +ELR   +G++ + F++++  +R QR+Q K D++      Q ++ FT    +V GP E +
Sbjct: 357 MELREAANGDK-DYFSVERKLKRAQRRQRKADEKAYVRESQRVDVFTFLNDSVLGPGEST 415

Query: 300 PHGRTGEIAHDESTSDWQQVKGETDPVDLTLGLMDD 407
             G   ++     T++ QQ   +T  V+ T+ + D+
Sbjct: 416 QQGE--QVTKKAKTNELQQHSTKTLNVE-TVRIADE 448


>AY061170-1|AAL28718.1|  230|Drosophila melanogaster LD13807p
           protein.
          Length = 230

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 132 NLELRVYGDGERPERFNLQKAWRRQRKQEKLDQETETG 245
           N+  ++Y DG+   +  + KAW   + + KL +ET  G
Sbjct: 186 NIMKKMYNDGDSKTKQMIAKAWTESQDKAKLGKETGGG 223


>AY060856-1|AAL28404.1|  183|Drosophila melanogaster GM03203p
           protein.
          Length = 183

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 129 QNLE-LRVYGDGERPERFNLQKAWRRQRKQEKLDQETETGQELEA 260
           QN+  LR+Y   ++PE    QKA     + EKL +E  T +E  A
Sbjct: 26  QNMSALRLYSTEKQPEEATEQKATESSPEVEKLTKELATAKEQNA 70


>AE014298-915|AAF46178.1|  230|Drosophila melanogaster CG3226-PA
           protein.
          Length = 230

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 132 NLELRVYGDGERPERFNLQKAWRRQRKQEKLDQETETG 245
           N+  ++Y DG+   +  + KAW   + + KL +ET  G
Sbjct: 186 NIMKKMYNDGDSKTKQMIAKAWTESQDKAKLGKETGGG 223


>X56689-1|CAA40017.1|  716|Drosophila melanogaster Protein on
           Ecdysone Puffs protein.
          Length = 716

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201 RQRKQEKLDQETETGQELEAFTAPAVEGPVEISPHGRTGEIAH-DESTSDWQQVK 362
           ++R    L++     +++E   APA EG  E +  G  GE+    E+T D + V+
Sbjct: 532 QKRAAAALEENERKKRKVEEAEAPAAEGAAEETTEGAEGELYDPSEATGDDEDVE 586


>BT001867-1|AAN71637.1|  502|Drosophila melanogaster SD02426p
           protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201 RQRKQEKLDQETETGQELEAFTAPAVEGPVEISPHGRTGEIAH-DESTSDWQQVK 362
           ++R    L++     +++E   APA EG  E +  G  GE+    E+T D + V+
Sbjct: 318 QKRAAAALEENERKKRKVEEAEAPAAEGAAEETTEGAEGELYDPSEATGDDEDVE 372


>AY118552-1|AAM49921.1|  693|Drosophila melanogaster LD34072p
           protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201 RQRKQEKLDQETETGQELEAFTAPAVEGPVEISPHGRTGEIAH-DESTSDWQQVK 362
           ++R    L++     +++E   APA EG  E +  G  GE+    E+T D + V+
Sbjct: 509 QKRAAAALEENERKKRKVEEAEAPAAEGAAEETTEGAEGELYDPSEATGDDEDVE 563


>AY118466-1|AAM49835.1|  485|Drosophila melanogaster GM02932p
           protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 186 QKAWRRQRKQEKLDQETETGQELEAFTAPAV-EGPVEISPHGRTGEIA 326
           +KA +RQRKQ+KL +E +  +E E+    A  E   +  P+  T  IA
Sbjct: 30  RKALKRQRKQDKLLKELQQAKEAESQAGKAANEVQAKDKPNPSTLSIA 77


>AE014296-2942|AAF49317.3|  502|Drosophila melanogaster CG6143-PA,
           isoform A protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201 RQRKQEKLDQETETGQELEAFTAPAVEGPVEISPHGRTGEIAH-DESTSDWQQVK 362
           ++R    L++     +++E   APA EG  E +  G  GE+    E+T D + V+
Sbjct: 318 QKRAAAALEENERKKRKVEEAEAPAAEGAAEETTEGAEGELYDPSEATGDDEDVE 372


>AE014296-2941|AAS64975.1|  693|Drosophila melanogaster CG6143-PC,
           isoform C protein.
          Length = 693

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201 RQRKQEKLDQETETGQELEAFTAPAVEGPVEISPHGRTGEIAH-DESTSDWQQVK 362
           ++R    L++     +++E   APA EG  E +  G  GE+    E+T D + V+
Sbjct: 509 QKRAAAALEENERKKRKVEEAEAPAAEGAAEETTEGAEGELYDPSEATGDDEDVE 563


>AE014296-2940|AAF49319.3|  716|Drosophila melanogaster CG6143-PB,
           isoform B protein.
          Length = 716

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +3

Query: 201 RQRKQEKLDQETETGQELEAFTAPAVEGPVEISPHGRTGEIAH-DESTSDWQQVK 362
           ++R    L++     +++E   APA EG  E +  G  GE+    E+T D + V+
Sbjct: 532 QKRAAAALEENERKKRKVEEAEAPAAEGAAEETTEGAEGELYDPSEATGDDEDVE 586


>AE013599-989|AAF58861.1|  485|Drosophila melanogaster CG12128-PA,
           isoform A protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +3

Query: 186 QKAWRRQRKQEKLDQETETGQELEAFTAPAV-EGPVEISPHGRTGEIA 326
           +KA +RQRKQ+KL +E +  +E E+    A  E   +  P+  T  IA
Sbjct: 30  RKALKRQRKQDKLLKELQQAKEAESQAGKAANEVQAKDKPNPSTLSIA 77


>AY047554-1|AAK77286.1| 1478|Drosophila melanogaster GH06265p
           protein.
          Length = 1478

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 168 PERFNLQKAWRRQRKQEKLDQETETG--QELEAFTAPAVEGPVE 293
           P+      AW+ ++ QEK  QET  G  Q +  + AP    P +
Sbjct: 790 PQELRNVMAWKLRQAQEKPSQETSAGSQQPVSQYAAPTQMRPAQ 833


>AE013599-1820|AAF58298.2| 1843|Drosophila melanogaster CG30483-PA
            protein.
          Length = 1843

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = +3

Query: 168  PERFNLQKAWRRQRKQEKLDQETETG--QELEAFTAPAVEGPVE 293
            P+      AW+ ++ QEK  QET  G  Q +  + AP    P +
Sbjct: 1155 PQELRNVMAWKLRQAQEKPSQETSAGSQQPVSQYAAPTQMRPAQ 1198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,354,499
Number of Sequences: 53049
Number of extensions: 314318
Number of successful extensions: 1153
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)