Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P18
(644 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 276 6e-74
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 276 6e-74
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 276 6e-74
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 276 6e-74
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 271 1e-72
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 92 1e-18
D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein. 31 4.6
BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592... 31 4.6
BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592... 31 4.6
BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592... 31 4.6
BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2 prot... 31 4.6
X68280-1|CAA48341.1| 1551|Homo sapiens protein ( H.sapiens PAPP-... 30 8.1
U28727-1|AAC50543.1| 1627|Homo sapiens pregnancy-associated plas... 30 8.1
BC078657-1|AAH78657.1| 1627|Homo sapiens pregnancy-associated pl... 30 8.1
AL691426-1|CAI16715.1| 1627|Homo sapiens pregnancy-associated pl... 30 8.1
AL353141-1|CAI16083.1| 1627|Homo sapiens pregnancy-associated pl... 30 8.1
AL137024-5|CAI14281.1| 1627|Homo sapiens pregnancy-associated pl... 30 8.1
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 276 bits (676), Expect = 6e-74
Identities = 130/146 (89%), Positives = 138/146 (94%)
Frame = +2
Query: 206 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 385
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 386 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 565
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 566 GRAGTVRRQAVDVSPLRRVNQAIWLL 643
GRAGTVRRQAVDVSPLRRVNQAIWLL
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLL 154
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 276 bits (676), Expect = 6e-74
Identities = 130/146 (89%), Positives = 138/146 (94%)
Frame = +2
Query: 206 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 385
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 386 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 565
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 566 GRAGTVRRQAVDVSPLRRVNQAIWLL 643
GRAGTVRRQAVDVSPLRRVNQAIWLL
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLL 154
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 276 bits (676), Expect = 6e-74
Identities = 130/146 (89%), Positives = 138/146 (94%)
Frame = +2
Query: 206 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 385
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 386 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 565
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 566 GRAGTVRRQAVDVSPLRRVNQAIWLL 643
GRAGTVRRQAVDVSPLRRVNQAIWLL
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLL 154
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 276 bits (676), Expect = 6e-74
Identities = 130/146 (89%), Positives = 138/146 (94%)
Frame = +2
Query: 206 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 385
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA KRFRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPI 68
Query: 386 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 565
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 566 GRAGTVRRQAVDVSPLRRVNQAIWLL 643
GRAGTVRRQAVDVSPLRRVNQAIWLL
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLL 154
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 271 bits (665), Expect = 1e-72
Identities = 128/146 (87%), Positives = 136/146 (93%)
Frame = +2
Query: 206 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPI 385
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLPHSAGRYA FRKAQCPI
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANAFRKAQCPI 68
Query: 386 VERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRI 565
VERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGENPLQVLV AIINSGPREDSTRI
Sbjct: 69 VERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRI 128
Query: 566 GRAGTVRRQAVDVSPLRRVNQAIWLL 643
GRAGTVRRQAVDVSPLRRVNQAIWLL
Sbjct: 129 GRAGTVRRQAVDVSPLRRVNQAIWLL 154
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 92.3 bits (219), Expect = 1e-18
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = +2
Query: 371 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTA 526
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE L LV A
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGEVGLCGLVRA 52
>D86966-1|BAA13202.2| 1317|Homo sapiens KIAA0211 protein.
Length = 1317
Score = 30.7 bits (66), Expect = 4.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 287 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 430
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 1039 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1085
>BC112234-1|AAI12235.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 287 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 430
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC112232-1|AAI12233.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 287 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 430
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC094688-1|AAH94688.1| 1267|Homo sapiens zinc finger protein 592
protein.
Length = 1267
Score = 30.7 bits (66), Expect = 4.6
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 287 QDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNN 430
Q+++ +E Y ++ S GR KR+ QC NSL H RNN
Sbjct: 989 QEWVPDRESYVSHMKKSHGRTL-KRYPCRQCEQSFHTPNSLRKHIRNN 1035
>BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2
protein.
Length = 380
Score = 30.7 bits (66), Expect = 4.6
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 138 WLRRTGPKKSPTRAAWLWTTCHYHSRLIFPKS 233
++ +TGPKK P + W CH RL++ K+
Sbjct: 261 FMEKTGPKKEPFKKRWFALDCH-ERRLLYYKN 291
>X68280-1|CAA48341.1| 1551|Homo sapiens protein ( H.sapiens PAPP-A
mRNA for pregnancy associated plasma protein-A. ).
Length = 1551
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 123 FRCEIWLRRTGPKKSPTRAAWLWTTCHYHSR 215
F ++WLR G ++SP L+ C Y SR
Sbjct: 43 FTLQVWLRAEGGQRSPAVITGLYDKCSYISR 73
>U28727-1|AAC50543.1| 1627|Homo sapiens pregnancy-associated plasma
protein-A preproform protein.
Length = 1627
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 123 FRCEIWLRRTGPKKSPTRAAWLWTTCHYHSR 215
F ++WLR G ++SP L+ C Y SR
Sbjct: 119 FTLQVWLRAEGGQRSPAVITGLYDKCSYISR 149
>BC078657-1|AAH78657.1| 1627|Homo sapiens pregnancy-associated
plasma protein A, pappalysin 1 protein.
Length = 1627
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 123 FRCEIWLRRTGPKKSPTRAAWLWTTCHYHSR 215
F ++WLR G ++SP L+ C Y SR
Sbjct: 119 FTLQVWLRAEGGQRSPAVITGLYDKCSYISR 149
>AL691426-1|CAI16715.1| 1627|Homo sapiens pregnancy-associated
plasma protein A, pappalysinadenine nucleotide
translocato protein.
Length = 1627
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 123 FRCEIWLRRTGPKKSPTRAAWLWTTCHYHSR 215
F ++WLR G ++SP L+ C Y SR
Sbjct: 119 FTLQVWLRAEGGQRSPAVITGLYDKCSYISR 149
>AL353141-1|CAI16083.1| 1627|Homo sapiens pregnancy-associated
plasma protein A, pappalysinmolog A (yeast) (TIMM17A)
pseu protein.
Length = 1627
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 123 FRCEIWLRRTGPKKSPTRAAWLWTTCHYHSR 215
F ++WLR G ++SP L+ C Y SR
Sbjct: 119 FTLQVWLRAEGGQRSPAVITGLYDKCSYISR 149
>AL137024-5|CAI14281.1| 1627|Homo sapiens pregnancy-associated
plasma protein A, pappalysin) (TERF1) pseudogene
protein.
Length = 1627
Score = 29.9 bits (64), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 123 FRCEIWLRRTGPKKSPTRAAWLWTTCHYHSR 215
F ++WLR G ++SP L+ C Y SR
Sbjct: 119 FTLQVWLRAEGGQRSPAVITGLYDKCSYISR 149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,908,138
Number of Sequences: 237096
Number of extensions: 2068747
Number of successful extensions: 7585
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7585
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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