Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P17
         (584 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                28   0.078
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    25   0.72 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.7  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   5.1  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   8.9  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   8.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   8.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   8.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.9  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 27.9 bits (59), Expect = 0.078
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -3

Query: 279 AGQLSPGFYISQQHPVQPTERRRVKPHH 196
           AG L P ++  Q HP Q    R   PHH
Sbjct: 309 AGFLPPSYHPHQHHPSQYHPHRGSSPHH 336


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 24.6 bits (51), Expect = 0.72
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 311 LVTSSRTELNVQGSYPQGFTFLSNILCSQQSG 216
           ++TS + E+N  G+Y   F   SN +  Q+SG
Sbjct: 28  VITSQQLEVNFDGNYINNFE-TSNGISHQESG 58


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = -1

Query: 152 FSTGQIGNVHECVIEGGEYVCH--PEYYL 72
           F TG +GNV  CV+       H    YYL
Sbjct: 64  FVTGLVGNVSTCVVIARNKSMHTATNYYL 92


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 13/55 (23%), Positives = 20/55 (36%)
 Frame = -1

Query: 416 GVRRHRGHIFNAANLHAGTSESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFT 252
           G      H+F  A+      +  E  L T   + CL     T +N Q +    F+
Sbjct: 265 GTNTDARHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPSTRINKQHTRGNNFS 319


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 276 GQLSPGFYISQQHPVQPTERRRVKPHHD 193
           G L PG  ++       TE + V+ HH+
Sbjct: 270 GILKPGMLVTFAPAALTTEVKSVEMHHE 297


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 78  VFGVAHIFASFNDTFVHVTDLSGRETI 158
           +F +  IF   N+T   VTD    ET+
Sbjct: 13  IFLILIIFIYSNETIAQVTDDENCETL 39


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 246 QQHPVQPTERRRVKPHHDQPSL 181
           +  PV+P  R+   P H +P L
Sbjct: 334 RSEPVEPPRRKNNCPLHCKPEL 355


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 78  VFGVAHIFASFNDTFVHVTDLSGRETI 158
           +F +  IF   N+T   VTD    ET+
Sbjct: 13  IFLILIIFIYSNETIAQVTDDENCETL 39


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/24 (25%), Positives = 14/24 (58%)
 Frame = -2

Query: 187 FTFMPPVTRAIVSRPDRSVTCTNV 116
           FT+   + ++I+  PD+ +T   +
Sbjct: 507 FTYASLIRQSIIESPDKQLTLNEI 530


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,426
Number of Sequences: 438
Number of extensions: 3257
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)