Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P16
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    27   0.44 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   0.77 
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    26   1.0  

>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 27.1 bits (57), Expect = 0.44
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 5/76 (6%)
 Frame = +3

Query: 312 HQCALCGHSFESFTTSRMHYLSKNHAKNQKKWFSKQSDG-----GLRAKEIPIKSRDLYC 476
           ++C  CG+ F   T    H  +K  A++     S  +       G  A  I  + +   C
Sbjct: 292 YRCPACGNLFVELTNFYNHSCTKAPAQDGVAVASSNNQSQPARTGGSAVTITSEGQRFQC 351

Query: 477 ELCDVHITSKTHAESH 524
            LCD+   +K   + H
Sbjct: 352 NLCDMSYRTKLQYQKH 367


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = +3

Query: 471 YCELCDVHIT--SKTHAESHYAGKPHRSIVE 557
           YC+ CD ++T  S +  ++H  G+ H+  V+
Sbjct: 5   YCDYCDTYLTHDSPSVRKTHCTGRKHKDNVK 35


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +3

Query: 492 HITSKTHAESHYAGKP 539
           H+ S+ HA SH+AG+P
Sbjct: 57  HLASQHHALSHHAGEP 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,168
Number of Sequences: 2352
Number of extensions: 9623
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)