Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P16
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical pr... 33 0.11
U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth... 32 0.34
AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopente... 32 0.34
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 31 0.45
U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical pr... 31 0.45
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 31 0.45
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 31 0.45
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 31 0.79
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 31 0.79
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 30 1.4
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 30 1.4
Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical pr... 29 1.8
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 29 1.8
X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin pr... 29 2.4
AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin ... 29 2.4
AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin ... 29 2.4
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 29 3.2
U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical pr... 28 4.2
AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical ... 28 4.2
AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical... 28 5.6
Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical pr... 27 7.4
U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein ... 27 7.4
U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein ... 27 7.4
Z99271-1|CAB16471.1| 663|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 27 9.7
U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical pr... 27 9.7
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 27 9.7
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 27 9.7
AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical ... 27 9.7
AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z71266-8|CAA95846.2| 729|Caenorhabditis elegans Hypothetical
protein R06C7.9 protein.
Length = 729
Score = 33.5 bits (73), Expect = 0.11
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 4/105 (3%)
Frame = +3
Query: 219 EEKALRYLRRCGV-SKENLK--NLPFHLLKLYEPHQCALCGHSFESFTTSRMHYLSKNHA 389
+E +L+ + CG+ KE K ++ HL + Y+ + C C SF S H +N
Sbjct: 197 QEHSLKDMMMCGLCGKEFSKRTHIYLHLSQEYKVYHCDGCNTSFASKWHLEKHRCKENET 256
Query: 390 KNQKKWFSKQSDGGLRAKEIPIKSRDLYC-ELCDVHITSKTHAES 521
+ KK ++ G + A+EI + ++ E V ++++ H +S
Sbjct: 257 IDDKK---RRRTGRVNAEEIKVIKEEIQDEEFGGVVLSNENHEKS 298
>U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth
rate protein 1 protein.
Length = 430
Score = 31.9 bits (69), Expect = 0.34
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 468 LYCELCDVHITSKTHAESHYAGKPHRSIVEGRKNAK 575
L CE+C++ +T K + + H GK H+ + +K A+
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQKKLAE 427
>AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopentenyl
transferase protein.
Length = 430
Score = 31.9 bits (69), Expect = 0.34
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +3
Query: 468 LYCELCDVHITSKTHAESHYAGKPHRSIVEGRKNAK 575
L CE+C++ +T K + + H GK H+ + +K A+
Sbjct: 392 LNCEICNISMTGKDNWQKHIDGKKHKHHAKQKKLAE 427
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical
protein K10D2.3 protein.
Length = 1425
Score = 31.5 bits (68), Expect = 0.45
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 471 YCELCDVHITSKTHAESHYAGKPH 542
YCE CD HI + HA++H H
Sbjct: 273 YCEKCDYHINTIGHAKAHLESSTH 296
>U21321-6|AAG00046.1| 206|Caenorhabditis elegans Hypothetical
protein ZK177.3 protein.
Length = 206
Score = 31.5 bits (68), Expect = 0.45
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 444 EIPIKSRDLYCELCDVHITSKTHAESHYAGKPHRSIV 554
++ K + CELCD T KT SHY G +S V
Sbjct: 29 DLECKHKYFRCELCDFKSTQKTGLTSHYHGHIRQSNV 65
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 31.5 bits (68), Expect = 0.45
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 249 CGVSKENLKNLPFHLLKLYEPHQCALCGHSFESFTTSRMHYLSKNHAK 392
C E+L HL + + H C CG +F S T R H S+ A+
Sbjct: 964 CDREYESLNQFVDHLTR-FHTHPCPSCGKAFSSQNTRRTHVCSRLFAE 1010
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 31.5 bits (68), Expect = 0.45
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 249 CGVSKENLKNLPFHLLKLYEPHQCALCGHSFESFTTSRMHYLSKNHAK 392
C E+L HL + + H C CG +F S T R H S+ A+
Sbjct: 964 CDREYESLNQFVDHLTR-FHTHPCPSCGKAFSSQNTRRTHVCSRLFAE 1010
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 30.7 bits (66), Expect = 0.79
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 306 EPHQCALCGHSFESFTTSRMHYLSKNHAKNQKKWFSKQSDGGLRAKEIPIKSRD 467
+P C +SF+ +YL N + + S++SDGG + IKS D
Sbjct: 13024 DPFNCVNTANSFDKIAALLANYLEANTKNSGSEVTSEKSDGGRVNYKATIKSAD 13077
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 30.7 bits (66), Expect = 0.79
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 306 EPHQCALCGHSFESFTTSRMHYLSKNHAKNQKKWFSKQSDGGLRAKEIPIKSRD 467
+P C +SF+ +YL N + + S++SDGG + IKS D
Sbjct: 13024 DPFNCVNTANSFDKIAALLANYLEANTKNSGSEVTSEKSDGGRVNYKATIKSAD 13077
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Frame = +3
Query: 243 RRCGVSKENLKNLPFHLLKLYE--PHQCALCGHSFESFTTSRMHYLSKNHAKNQK----- 401
++CG + + L HLL + P+ C CG F + + H K K
Sbjct: 157 KQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCG 216
Query: 402 KWFSKQSDGGLRAKEIPIKSRDLYCELC----DVHITSKTHAESHYAGKPHRSI 551
K FS+ S+ ++ + C++C + + H ESH+ G P +
Sbjct: 217 KAFSQSSNLITHTRK-HTGFKPFACDVCGRTFQRKVDRRRHRESHHPGHPEECV 269
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 29.9 bits (64), Expect = 1.4
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 11/114 (9%)
Frame = +3
Query: 243 RRCGVSKENLKNLPFHLLKLYE--PHQCALCGHSFESFTTSRMHYLSKNHAKNQK----- 401
++CG + + L HLL + P+ C CG F + + H K K
Sbjct: 157 KQCGKTFKRSSTLSTHLLIHSDTRPYPCEYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCG 216
Query: 402 KWFSKQSDGGLRAKEIPIKSRDLYCELC----DVHITSKTHAESHYAGKPHRSI 551
K FS+ S+ ++ + C++C + + H ESH+ G P +
Sbjct: 217 KAFSQSSNLITHTRK-HTGFKPFACDVCGRTFQRKVDRRRHRESHHPGHPEECV 269
>Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical
protein W02D9.4 protein.
Length = 338
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 432 VHHQTVWKTIFSGSSHDFLK 373
VH Q W+ F GS HDF++
Sbjct: 312 VHFQGAWQNFFDGSHHDFVQ 331
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 306 EPHQCALCGHSFESFTTSRMHYLSKNHAKNQKK 404
EP C C S +S H SK H +N+KK
Sbjct: 69 EPLYCKACRKSIKSENAMTDHVASKKHKENEKK 101
Score = 29.1 bits (62), Expect = 2.4
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 12/88 (13%)
Frame = +3
Query: 318 CALCGHSFESFTTSRMHYLSKNHAKNQKKWFSKQSDGGLR------AKEIPIKS------ 461
C C FE+ R HY ++ H N K+ ++ G+ A P K
Sbjct: 9 CVTCRVVFETAELQRDHYKTEWHRYNLKRQAAELPAIGIELFNEKAASFNPTKPVVAASV 68
Query: 462 RDLYCELCDVHITSKTHAESHYAGKPHR 545
LYC+ C I S+ H A K H+
Sbjct: 69 EPLYCKACRKSIKSENAMTDHVASKKHK 96
>X56213-1|CAA39670.1| 1651|Caenorhabditis elegans vitellogenin
protein.
Length = 1651
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 276 NLPFHLLKLYEPHQCALCGH 335
N HL LY QC LCGH
Sbjct: 1462 NARIHLSALYRNQQCGLCGH 1481
>AF047659-3|AAC04423.2| 1650|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
a protein.
Length = 1650
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 276 NLPFHLLKLYEPHQCALCGH 335
N HL LY QC LCGH
Sbjct: 1462 NARIHLSALYRNQQCGLCGH 1481
>AF047659-2|AAQ91901.1| 1651|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 6, isoform
c protein.
Length = 1651
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 276 NLPFHLLKLYEPHQCALCGH 335
N HL LY QC LCGH
Sbjct: 1462 NARIHLSALYRNQQCGLCGH 1481
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 234 RYLRRCGVSKENLKNLPFHLLKLYE 308
R+L++C +E+LKN +LK YE
Sbjct: 990 RHLKKCNTEEESLKNYEEEILKNYE 1014
>U39993-1|AAA81086.1| 594|Caenorhabditis elegans Hypothetical
protein F47E1.3 protein.
Length = 594
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 10/86 (11%)
Frame = +3
Query: 318 CALCGHSFESFTTSRMH--YLSKNHAKNQ----KKWFSKQSDGGLRAKEIPIKSRDLYCE 479
C +C SFE R+H ++ +NH + +K FS QS + + R C
Sbjct: 497 CTICNRSFEKRDRLRIHILHVHENHRPHVCSVCQKSFS-QSSSLNKHLRVHSGERPYKCS 555
Query: 480 LCDVHITS----KTHAESHYAGKPHR 545
C T+ +TH H KP +
Sbjct: 556 FCPKAFTASSILRTHVRQHSGEKPFK 581
>AC098856-8|ABO52819.1| 384|Caenorhabditis elegans Hypothetical
protein Y37F4.6 protein.
Length = 384
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 249 CGVSKENLKNLPFHLLKLYEPHQCALCGHSFESFTTSRMHYLSKNHAKNQKKWFSKQSDG 428
C S ++ +++ H + +E + CG+ FE++ + HY + W +++ G
Sbjct: 65 CPHSFQDPQDMRIHYMFDHESVKLFCCGNRFENYDSFLEHYTQTLNGTGHATWMARECWG 124
Query: 429 -GLR 437
G+R
Sbjct: 125 CGIR 128
>AL117204-29|CAB55138.1| 1097|Caenorhabditis elegans Hypothetical
protein Y116A8C.36 protein.
Length = 1097
Score = 27.9 bits (59), Expect = 5.6
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +3
Query: 231 LRYLRRCGVSKENLKNLPFHLLKLYEPHQCALCGHSFESFTTSRMHYLSKNHAKNQKKWF 410
L +R CG+S + N P L EP Q + +FE R LSK A+ +++
Sbjct: 256 LELVRMCGISSRSANNTP-ELEPGAEPPQKSPAPKTFED---KRQDNLSKGQAELERRRR 311
Query: 411 SKQSDGGLRAKEIPIKSRD 467
+ + R E+ K R+
Sbjct: 312 VLEEEEQRRRAEVEKKERE 330
>Z81137-2|CAB03465.1| 386|Caenorhabditis elegans Hypothetical
protein W02D9.3 protein.
Length = 386
Score = 27.5 bits (58), Expect = 7.4
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 336 SFESFTTSRMHYLSK--NHAKNQKKWFSKQSDGGLRAKEIPIKSRDLYCELCDVH-ITSK 506
S + F R +LS N +KN KK SD +IP ++C L TS
Sbjct: 197 SHKEFQKKRAKFLSSQSNGSKNAKKRRQADSDDDTPNVQIPFPKPSVFCPLLSPEPATSS 256
Query: 507 THAESHYAG 533
+ + Y+G
Sbjct: 257 STSGLQYSG 265
>U97016-4|AAN84886.1| 2692|Caenorhabditis elegans Lethal protein
363, isoform b protein.
Length = 2692
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 372 LSKNHAKNQKKWFSKQSDGGLRAKEIPIKSRDL 470
+S+ AKN+ +WF K D L + P + DL
Sbjct: 270 VSQREAKNKTEWFKKCFDEALEGQPNPSQKDDL 302
>U97016-3|AAN84885.1| 2695|Caenorhabditis elegans Lethal protein
363, isoform a protein.
Length = 2695
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 372 LSKNHAKNQKKWFSKQSDGGLRAKEIPIKSRDL 470
+S+ AKN+ +WF K D L + P + DL
Sbjct: 270 VSQREAKNKTEWFKKCFDEALEGQPNPSQKDDL 302
>Z99271-1|CAB16471.1| 663|Caenorhabditis elegans Hypothetical
protein Y43F4A.1a protein.
Length = 663
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/81 (28%), Positives = 35/81 (43%)
Frame = +3
Query: 243 RRCGVSKENLKNLPFHLLKLYEPHQCALCGHSFESFTTSRMHYLSKNHAKNQKKWFSKQS 422
R+CG ++ L ++ YE HQC S+ + M+ +A+NQK K
Sbjct: 550 RKCG----RIRVLSHYMAGCYE-HQCTNGTLYVGSYNATDMYPC---YAENQKIHIKKVV 601
Query: 423 DGGLRAKEIPIKSRDLYCELC 485
DG LR + + YC C
Sbjct: 602 DGWLREGSLICPKCEDYCTNC 622
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical protein
T08A11.1 protein.
Length = 1872
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 273 KNLPFHLLKLYEPHQCALCGHSFESFTTSRMHY 371
K+L + LYE +CA+ G F+S S H+
Sbjct: 1133 KSLEDYRNGLYEQDECAIIGTPFDSLEMSNSHH 1165
>U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical
protein K07C11.9 protein.
Length = 642
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 204 RKSPVEEKALRYLRRCGVSKENLKNLPFHLLKLYEPHQCALCGHSFESF--TTSRMHYLS 377
+ + ++EK RC + E L+N +L E +C GH E F R H +
Sbjct: 116 KTASLKEKKASIESRCNMINEFLENYSLSSEELRELDECEQSGHLSEFFFKVLERCHEIR 175
Query: 378 KN 383
+N
Sbjct: 176 EN 177
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 420 SDGGLRAKEIPIKSRDLYCELCDVHIT 500
S+ +RA+ + SR CELCD +IT
Sbjct: 2469 SNKAMRAETVKPPSRSGGCELCDANIT 2495
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 273 KNLPFHLLKLYEPHQCALCGHSFESFTTSRMHY 371
K+L + LYE +CA+ G F+S S H+
Sbjct: 1133 KSLEDYRNGLYEQDECAIIGTPFDSLEMSNSHH 1165
>AC025721-1|AAK29910.1| 295|Caenorhabditis elegans Hypothetical
protein Y48G8AL.9 protein.
Length = 295
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/38 (23%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +3
Query: 474 CELCDVHITSKTHAESHYAGKPHRS--IVEGRKNAKNP 581
CE+C++ + +K +++H+ + H + ++ KN P
Sbjct: 194 CEICEIDLPTKRASDAHFYSEDHETAQLMYPSKNTTQP 231
>AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical
protein F43C11.7 protein.
Length = 295
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1
Query: 570 RSSVLQRCCDEVSLHSGIQREFLMLYAHRIIRN 472
RS ++ R C+E +H+G ++ L + A ++ +N
Sbjct: 114 RSKLMCRTCEEFGVHAGHRKGLLQVEAKKVRQN 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,057,216
Number of Sequences: 27780
Number of extensions: 213507
Number of successful extensions: 653
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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