BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P14
(502 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 25 0.59
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 25 0.59
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 25 0.59
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 25 0.59
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 23 1.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 5.5
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.2
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 7.2
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 9.5
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.5
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.5
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.5
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 9.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.5
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 92 VLKLGSSILSKNIFKL*YNNKQYNEK 15
+ L ++ + N +K YNN YN+K
Sbjct: 82 ISSLSNNTIHNNNYKYNYNNNNYNKK 107
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 92 VLKLGSSILSKNIFKL*YNNKQYNEK 15
+ L ++ + N +K YNN YN+K
Sbjct: 82 ISSLSNNTIHNNNYKYNYNNNNYNKK 107
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 92 VLKLGSSILSKNIFKL*YNNKQYNEK 15
+ L ++ + N +K YNN YN+K
Sbjct: 82 ISSLSNNTIHNNNYKYNYNNNNYNKK 107
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 92 VLKLGSSILSKNIFKL*YNNKQYNEK 15
+ L ++ + N +K YNN YN+K
Sbjct: 82 ISSLSNNTIHNNNYKYNYNNNNYNKK 107
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 23.4 bits (48), Expect = 1.4
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 74 NSQVLILFVISIASII 121
NSQ+LILF++S+ I
Sbjct: 3 NSQILILFILSLTITI 18
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 92 VLKLGSSILSKNIFKL*YNNKQYNEKH 12
+ L ++ + N +K YNN YN +
Sbjct: 81 ISSLSNNTIHNNNYKYNYNNNNYNNNN 107
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 92 VLKLGSSILSKNIFKL*YNNKQYNEKH 12
+ L ++ + N +K YNN YN +
Sbjct: 81 ISSLSNNTIHNNNYKYNYNNNNYNNNN 107
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 5.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 361 CGSTYYVFGTNYN 399
CGS Y ++ T YN
Sbjct: 1429 CGSRYQIYVTAYN 1441
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 7.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 74 SILSKNIFKL*YNNKQYNEKH 12
+I + N +K YNN YN +
Sbjct: 322 TIHNNNNYKYNYNNNNYNNNN 342
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.0 bits (42), Expect = 7.2
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 239 HRQKQNLLKVLRC 201
H+QK++ L+V RC
Sbjct: 233 HQQKRHKLRVTRC 245
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 74 SILSKNIFKL*YNNKQYN 21
+I + N +K YNN YN
Sbjct: 89 TIHNNNNYKYNYNNNNYN 106
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 74 SILSKNIFKL*YNNKQYN 21
+I + N +K YNN YN
Sbjct: 89 TIHNNNNYKYNYNNNNYN 106
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 74 SILSKNIFKL*YNNKQYN 21
+I + N +K YNN YN
Sbjct: 89 TIHNNNNYKYNYNNNNYN 106
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 74 SILSKNIFKL*YNNKQYN 21
+I + N +K YNN YN
Sbjct: 89 TIHNNNNYKYNYNNNNYN 106
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 20.6 bits (41), Expect = 9.5
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = -1
Query: 403 SCCSWC 386
SCC WC
Sbjct: 10 SCCCWC 15
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +1
Query: 361 CGSTYYVFGTNYN 399
CG+TY ++ T++N
Sbjct: 1467 CGNTYQLYLTSHN 1479
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 9.5
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = +1
Query: 361 CGSTYYVFGTNYN 399
CG+TY ++ T++N
Sbjct: 1463 CGNTYQLYLTSHN 1475
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,563
Number of Sequences: 438
Number of extensions: 2411
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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