Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P13
(575 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 292 2e-80
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 292 2e-80
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 142 3e-35
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 125 4e-30
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 70 2e-13
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 3e-07
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||... 33 0.023
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 33 0.023
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 32 0.052
SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subu... 29 0.49
SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.49
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 29 0.64
SPAC21E11.06 |tif224||translation initiation factor eIF2B delta ... 28 0.85
SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces po... 27 2.6
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 27 2.6
SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit Smc6|Schizosac... 26 3.4
SPCC622.12c |||NADP-specific glutamate dehydrogenase |Schizosacc... 26 3.4
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 26 3.4
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 26 4.5
SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomy... 26 4.5
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 26 4.5
SPAC1002.10c |sgt1||SGT1 family transcriptional regulator Sgt1|S... 26 4.5
SPAC6F12.07 |tom20||mitochondrial TOM complex subunit Tom20|Schi... 25 6.0
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 25 6.0
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 6.0
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 25 6.0
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 7.9
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 292 bits (717), Expect = 2e-80
Identities = 141/189 (74%), Positives = 158/189 (83%)
Frame = +2
Query: 8 GRVFSGKVVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLV 187
GRVFSG V +G K RI GPN+ PGKK+DL+ K IQRT+LMMG +E IED P+GNI GLV
Sbjct: 398 GRVFSGTVRSGLKVRIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLV 457
Query: 188 GVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPM 367
GVDQFLVK+GT+TT + AHNMKVMKFSVSPVV++AVE KN DLPKLVEGLKRL+KSDP
Sbjct: 458 GVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPC 517
Query: 368 VQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLS 547
V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+VSE S LS
Sbjct: 518 VLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALS 577
Query: 548 KSPNKHNRL 574
KSPNKHNR+
Sbjct: 578 KSPNKHNRI 586
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 292 bits (717), Expect = 2e-80
Identities = 141/189 (74%), Positives = 158/189 (83%)
Frame = +2
Query: 8 GRVFSGKVVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLV 187
GRVFSG V +G K RI GPN+ PGKK+DL+ K IQRT+LMMG +E IED P+GNI GLV
Sbjct: 398 GRVFSGTVRSGLKVRIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLV 457
Query: 188 GVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPM 367
GVDQFLVK+GT+TT + AHNMKVMKFSVSPVV++AVE KN DLPKLVEGLKRL+KSDP
Sbjct: 458 GVDQFLVKSGTLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPC 517
Query: 368 VQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLS 547
V C ESGEHIVAGAGELHLEICLKDL+EDHA IP+K S PVVSYRE+VSE S LS
Sbjct: 518 VLCTTSESGEHIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALS 577
Query: 548 KSPNKHNRL 574
KSPNKHNR+
Sbjct: 578 KSPNKHNRI 586
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 142 bits (344), Expect = 3e-35
Identities = 71/181 (39%), Positives = 109/181 (60%), Gaps = 1/181 (0%)
Frame = +2
Query: 11 RVFSGKVVTGQKARIMGPNFQPGKKEDLYEK-TIQRTILMMGRYVEAIEDVPSGNICGLV 187
R++SG + GQ+ + GP + P E K T++ LMMG+ + +E VP+GN+ +
Sbjct: 473 RIYSGTISVGQEVYVYGPKYDPVNPEKHITKVTVESLYLMMGQELVYLETVPAGNVFAIG 532
Query: 188 GVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSDPM 367
G+ +++T T+ + N N+ + + P+VR+A+EP P ++ KLV GL L ++DP
Sbjct: 533 GLAGTVLRTATLCSSPNGPNLVGVTQQMEPIVRVALEPVRPFEMNKLVTGLDMLNQADPC 592
Query: 368 VQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLS 547
VQ EE+GEH++ AGE+HLE CLKDL E A I I+ S P+V YRET D + +
Sbjct: 593 VQIAVEENGEHVIMCAGEIHLERCLKDLRERFAKIEIQASQPLVPYRETTIATPDLLAKN 652
Query: 548 K 550
K
Sbjct: 653 K 653
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 125 bits (302), Expect = 4e-30
Identities = 68/191 (35%), Positives = 108/191 (56%), Gaps = 3/191 (1%)
Frame = +2
Query: 11 RVFSGKVVTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVG 190
RV+SG+V GQK +++G N+ +ED+ I + RY ++ +G + L G
Sbjct: 508 RVYSGQVKKGQKVKVLGENYSLEDEEDMVVAHIAEICVPCARYRLHVDGAVAGMLVLLGG 567
Query: 191 VDQFLVKTGTITTFK---NAHNMKVMKFSVSPVVRIAVEPKNPADLPKLVEGLKRLAKSD 361
VD + KT TI + + + + + V ++AVEP NP++LPKL++GL++ KS
Sbjct: 568 VDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKSY 627
Query: 362 PMVQCINEESGEHIVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMC 541
P+ EESGEH + G GE++++ L DL ++ I I+ SDPV + ET + S C
Sbjct: 628 PLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLYSEIEIRVSDPVARFCETAVDTSSIKC 687
Query: 542 LSKSPNKHNRL 574
S +PNK NR+
Sbjct: 688 FSDTPNKKNRI 698
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 70.1 bits (164), Expect = 2e-13
Identities = 42/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Frame = +2
Query: 107 IQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVR 286
+ R + M +E IE V +G IC L G++ T T ++ M M F PV+
Sbjct: 421 VSRLVRMHSNDMEEIEKVEAGGICALFGIE--CASGDTFTDGSVSYTMTSM-FVPEPVIS 477
Query: 287 IAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVAGAGELHLEICLKDLEEDH 463
++++PK+ D + L R + DP + ++ ES E I++G GELHLE+ ++ + ++
Sbjct: 478 LSLKPKSK-DTTSFSKALNRFQREDPTFRVQLDNESKETIISGMGELHLEVYVERMRREY 536
Query: 464 ACIPIKKSDPVVSYRETVSEE 526
+ + P V++RET+S++
Sbjct: 537 K-VDCETGKPRVAFRETLSKK 556
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 49.6 bits (113), Expect = 3e-07
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 9/176 (5%)
Frame = +2
Query: 68 FQPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTIT----TFK 235
F P K+ E+ I R + + ++ + +GNI + G+ QF TG I K
Sbjct: 371 FNPRTKKS--ERAI-RLYNVFADQTQEVDCISAGNIGVISGIKQF--HTGDIIINKENSK 425
Query: 236 NAHNMKVMKFSV----SPVVRIAVEPKNPADLPKLVEGLKRLAKSDPMVQCINE-ESGEH 400
N H SV PV ++EP + D P L+E L + + DP + + E+G+
Sbjct: 426 NFHEYLSGNQSVISIPEPVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQL 485
Query: 401 IVAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNKHN 568
++ G G +HL++ + L + V YRET+ + S + NK N
Sbjct: 486 LIQGMGIMHLQVSYERLVSEFGA-RASLGKVQVGYRETLIDVSFNSVTLSTENKEN 540
>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 673
Score = 33.5 bits (73), Expect = 0.023
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = -2
Query: 256 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 77
N+ + V+ SDG L A V GG N + D L GLL +++
Sbjct: 117 NVDLDKVVNSSDGPRLGIAFSGGGLRAMVNGGGAFNAFD-SRFESDSPLSGLLQSAMYIS 175
Query: 76 GLEVGAHDTGLLSGNDFT 23
GL G+ G ++ N+FT
Sbjct: 176 GLSGGSWLVGSVAINNFT 193
>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 673
Score = 33.5 bits (73), Expect = 0.023
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = -2
Query: 256 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 77
N+ + V+ SDG L A V GG N + D L GLL +++
Sbjct: 117 NVDLDKVVNSSDGPRLGIAFSGGGLRAMVNGGGAFNAFD-SRFESDSPLSGLLQSAMYIS 175
Query: 76 GLEVGAHDTGLLSGNDFT 23
GL G+ G ++ N+FT
Sbjct: 176 GLSGGSWLVGSVAINNFT 193
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 32.3 bits (70), Expect = 0.052
Identities = 22/77 (28%), Positives = 36/77 (46%)
Frame = -2
Query: 256 NLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLA 77
++ V V+ SDG L A V GG +LN + + +L G+L ++A
Sbjct: 81 DVDVNSVINDSDGPRLGLAFSGGGLRAMVHGGGVLNAFD-SRNGNGSSLAGILQSAMYIA 139
Query: 76 GLEVGAHDTGLLSGNDF 26
GL G+ G ++ N+F
Sbjct: 140 GLSGGSWLVGSVAVNNF 156
>SPAC22H12.02 |tfg3|taf14|transcription factor TFIIF complex subunit
Tfg3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 241
Score = 29.1 bits (62), Expect = 0.49
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Frame = +2
Query: 308 PADLPKLVEGLKRLAKSD--PMVQCINEESGEHIVA----GAGELHLEI 436
P D+ KL EGL++L + D +VQ +NE + GE H+++
Sbjct: 172 PVDMDKLAEGLQKLQEDDLLQVVQMVNENKTPDMYVRNDIEGGEFHIDL 220
>SPBC146.02 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 263
Score = 29.1 bits (62), Expect = 0.49
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = -2
Query: 298 LNGYTHDGRHAKLHNLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHED 119
+NG +LHN+ C ++GSD S D+T + +G N L ++ H D
Sbjct: 1 MNGIRKKPATLQLHNIKTSCFIDGSDDQS--------DRTRSSSGDSTSNSLKLSHHISD 52
Query: 118 GTLDGL 101
++ +
Sbjct: 53 ELINAI 58
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 28.7 bits (61), Expect = 0.64
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = -2
Query: 310 GILGLN-GYTHD--GRHAKLHNLHVMCVLEGSDGTSLDEELIDADQTANVTGGHILNGLH 140
GIL N G+ HD H H+ H MC+ ++ ++ EE + N H
Sbjct: 467 GILAFNHGHNHDHGSHHHHSHSNHSMCLPNTTNDINIFEEFEEEKDNVEAQKMGYTNDDH 526
Query: 139 VTAH 128
V+ H
Sbjct: 527 VSQH 530
>SPAC21E11.06 |tif224||translation initiation factor eIF2B delta
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 28.3 bits (60), Expect = 0.85
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 185 VGVDQFLVKTGTITTFKNAHNMKV--MKFSVSPVVRIAV 295
+GVD F K G + +K+ N+K+ +K+ V+P I V
Sbjct: 404 MGVDDFEEKPGVLANWKSVKNLKLLSLKYDVTPPRLITV 442
>SPAC11G7.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 536
Score = 27.9 bits (59), Expect = 1.1
Identities = 26/111 (23%), Positives = 42/111 (37%)
Frame = -3
Query: 531 SDSSLTVSRYDTTGSDFLIGMQAWSSSRSLRQISRCNSPAPATMCSPDSSLMHCTIGSDL 352
S +SLT S T S + SSS +L S + ++ SSL H +
Sbjct: 94 SSASLTSSSSATLTSSSSASPTSSSSSHALSSSSSSLVASSSSSGMSSSSLSHSSSVPSS 153
Query: 351 ARRFRPSTSLGRSAGFLGSTAIRTTGDTLNFITFMLCAFLKVVMVPVLTRN 199
+ + S+ S T D + IT + +++ V+ P T N
Sbjct: 154 SSSYHSSSMTTSGLSSSASIVSSTYRDGPSIITLVSTSYVSEVVTPTTTNN 204
>SPACUNK4.08 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 793
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +2
Query: 194 DQFLVKTGTITTFKNAHNMKVMKFSVSPVV 283
D FLVK G + ++ +N+ FSVS +V
Sbjct: 82 DTFLVKYGDLINIQDPYNLNKTLFSVSDLV 111
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 84 FLPGWKLGPMIRAFCPVTTL 25
FL GW L + AFC VT +
Sbjct: 1738 FLDGWSLPKTVLAFCAVTAI 1757
>SPCC5E4.06 |smc6|rad18|Smc5-6 complex SMC subunit
Smc6|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1140
Score = 26.2 bits (55), Expect = 3.4
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 163 GHILNGLHVTAHHEDGTLDGLLIQIFFLAGLEVGAHD 53
G+++NG V +HH+ L L+ Q A + VG +D
Sbjct: 573 GNVINGFIVRSHHDQLILKELMRQSNCHATVVVGKYD 609
>SPCC622.12c |||NADP-specific glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 59 GPNFQP-GKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVG 190
G +F P GK ++ + Q + + RY+ DVP+G+I G+ G
Sbjct: 115 GSDFDPKGKSDNEIRRFSQAFMRQLFRYIGPQTDVPAGDI-GVTG 158
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 26.2 bits (55), Expect = 3.4
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = -2
Query: 238 VLEGSDGTSLDEELIDADQTANVTGGHILNGLHVTAHHEDGTLDGLLIQIFFLAGLEVGA 59
VL +DG L + A +TG +N + +L G+L +L GL G+
Sbjct: 116 VLNDTDGPRLGIAISGGGFPAMLTGAGAINAFDAR-NGNTTSLGGILQSSMYLTGLSGGS 174
Query: 58 HDTGLLSGNDF 26
G ++ N+F
Sbjct: 175 WLVGSVAVNNF 185
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 25.8 bits (54), Expect = 4.5
Identities = 7/21 (33%), Positives = 18/21 (85%)
Frame = +3
Query: 12 ACSPVKSLPDRRPVSWAPTSS 74
A +PV+++ ++ P++W+P+S+
Sbjct: 91 ALTPVRNMSNKPPLTWSPSSA 111
>SPBC1734.15 |rsc4|brd1|RSC complex subunit Rsc4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 542
Score = 25.8 bits (54), Expect = 4.5
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 32 VTGQKARIMGPNFQPGKKEDLYEKTIQRTILMMGRYVE 145
V G + P+ +PG Y +T++R ++ YV+
Sbjct: 504 VLGSTEPVEPPSIEPGLPASAYSRTVERERFVLMAYVQ 541
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 25.8 bits (54), Expect = 4.5
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 510 KRSVKSLTKCAYPNRPT 560
+RS+KS C PN+PT
Sbjct: 735 RRSIKSFFSCITPNKPT 751
>SPAC1002.10c |sgt1||SGT1 family transcriptional regulator
Sgt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 590
Score = 25.8 bits (54), Expect = 4.5
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -3
Query: 543 KHIWSDSSLTVSRYDTTGSDFLIGM 469
+HIW + L + R + G D ++G+
Sbjct: 57 EHIWQNEELNLQRVEYQGKDCILGI 81
>SPAC6F12.07 |tom20||mitochondrial TOM complex subunit
Tom20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 25.4 bits (53), Expect = 6.0
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 71 QPGKKEDLYEKTIQRTILMMGRYVEAIEDVPS 166
QP + +YE+T+ I+ + R ++A E +PS
Sbjct: 119 QPVELFAIYERTVPEPIMNLLRAMQAKESIPS 150
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 25.4 bits (53), Expect = 6.0
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +2
Query: 431 EICLKDLEEDHACIPIKKSDPVVSYRETVSEESDQMCLSKSPNK 562
E+C +LE+D I +S +S + +++ DQ+ S + +K
Sbjct: 64 ELCNFELEKDSLESMIHESSTALSAQSNTAQDGDQLASSSTISK 107
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.4 bits (53), Expect = 6.0
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +2
Query: 302 KNPADLPKLVEGLKRLAKSDPMVQC-INEES--GEHIVAGAGELHLEICLKDLEEDHACI 472
K P +P L KR KS QC I +E + G G+L+ + + + D + +
Sbjct: 16 KEPGKVPPLDIDFKRSVKSSQFSQCAITDEPLYPPIVSCGLGKLYNKASILQMLLDRSSV 75
Query: 473 PIKKSDPVVSYRETV 517
P K + S ++ V
Sbjct: 76 P-KSPSHIKSLKDVV 89
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.4 bits (53), Expect = 6.0
Identities = 22/83 (26%), Positives = 37/83 (44%)
Frame = -3
Query: 387 SSLMHCTIGSDLARRFRPSTSLGRSAGFLGSTAIRTTGDTLNFITFMLCAFLKVVMVPVL 208
S +H T+ S L + + P SL FLG TA + + ++ + + A L V
Sbjct: 469 SGALHVTVVSGLPQVYYPEASLTSFGNFLG-TATSYSSASASYPSTSMSASLSSVHTSSA 527
Query: 207 TRN*STPTRPQMLPEGTSSMAST 139
T + S + G+SS +S+
Sbjct: 528 TSS-SKSSSSSSSRSGSSSSSSS 549
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.0 bits (52), Expect = 7.9
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 137 YVEAIEDVPSGNIC--GLVGVDQFLVKTGTITTFKNAHNMKVMKFSVSPVVRIAVE 298
Y+ A ++ SG G V + L T ++ A + + K + SP+VRI E
Sbjct: 414 YIAAFSEILSGRNYDFGEVSIQLMLSCTTCVSNMMEALPLCMAKIAYSPIVRILCE 469
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,557,462
Number of Sequences: 5004
Number of extensions: 54218
Number of successful extensions: 228
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 246098644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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