Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P08
(406 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 73 7e-14
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 56 1e-08
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 53 8e-08
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 51 4e-07
07_01_0180 + 1266975-1267550 29 1.4
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504... 28 2.4
08_02_0860 + 21970888-21971833,21973400-21974127 28 2.4
09_04_0017 + 13821348-13823404,13823546-13823819,13823916-138242... 28 3.2
05_05_0240 + 23548408-23549408,23549882-23549980,23550282-235503... 28 3.2
01_06_1723 - 39443176-39443505,39443615-39443710,39443834-394439... 28 3.2
12_01_0721 + 6353254-6353646 27 4.3
02_04_0585 - 24088344-24089366,24089833-24090075,24090305-240906... 27 4.3
02_05_0287 - 27525722-27525812,27525927-27526057,27526945-275270... 27 5.6
01_06_0842 - 32365240-32365615,32365772-32366127 27 7.5
10_08_0048 - 14441540-14441620,14442044-14442111,14442275-144424... 26 9.9
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 73.3 bits (172), Expect = 7e-14
Identities = 44/120 (36%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Frame = +2
Query: 23 LKLMEAFSNETNFTVWSTISN-CISKLSALFTQTP-LDEPLKQYGRKLYANITKKLGWDA 196
L+L+ A+ NE+++TV S +++ C+ TP L +KQ L + K LGWD
Sbjct: 529 LRLLNAYRNESDYTVLSHVTSVCLGIDKISVDATPELSRDIKQLLINLLLSAAKTLGWDP 588
Query: 197 EEKESHLDTLLRSLVLNKMISFEDPDTIKEAKNRFERHMCGSRS--LPADLRSACYRAVL 370
+E ESHLD +LRSL+L ++ +TI E RF + ++ LP D R A Y AV+
Sbjct: 589 KEGESHLDVMLRSLLLIALVKLGHDETINEGVRRFHIFIKDRKTNILPPDTRKASYLAVM 648
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 56.0 bits (129), Expect = 1e-08
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 5/127 (3%)
Frame = +2
Query: 5 EDFLQFLKLMEAFSNETNFTVWSTI---SNCISKLSALFTQTPLDEPLKQYGRKLYANIT 175
+ + L L+ A+ +ET +TV + + S I ++ A+ L + LK++
Sbjct: 588 QKLVSLLHLIAAYKDETEYTVLARVIDTSLSIVEMVAVAAPEGLGK-LKKFLIDFLEPFA 646
Query: 176 KKLGWDAEEKESHLDTLLRSLVLNKMISFEDPDTIKEAKNRFERHMCGSRS--LPADLRS 349
+++GWDA+ E HLD LLR +L + TI EA RF + + LP D+R
Sbjct: 647 QRIGWDAKSGEGHLDALLRGTLLTALAELGHEATINEAVRRFNIFVEDRETPLLPPDVRK 706
Query: 350 ACYRAVL 370
A Y A++
Sbjct: 707 AAYVALM 713
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 53.2 bits (122), Expect = 8e-08
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 3/108 (2%)
Frame = +2
Query: 56 NFTVWSTISNCISKLSALFTQTP-LDEPLKQYGRKLYANITKKLGWDAEEKESHLDTLLR 232
+FT+ +++ ++K+S TP L +KQ KL KKLGWD ++ ESHL+ +LR
Sbjct: 591 SFTLACQVTSSVAKIS--IDATPDLAGDIKQLFIKLLLPPAKKLGWDPKDGESHLNAMLR 648
Query: 233 SLVLNKMISFEDPDTIKEAKNRFERHMCGSRS--LPADLRSACYRAVL 370
++L ++ TI E RF+ + L D R A Y +V+
Sbjct: 649 PMLLVALVQLGHDKTINEGFRRFQIFFDDRNTSLLTPDTRKAAYLSVM 696
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 50.8 bits (116), Expect = 4e-07
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 179 KLGWDAEEKESHLDTLLRSLVLNKMISFEDPDTIKEAKNRFERHMCG-SRSLPADLRSAC 355
KLGWD + ESHLD +LR ++L ++ TI E RF+ + SLP D R A
Sbjct: 644 KLGWDPKNSESHLDAMLRPVLLVGLVQLGHDKTISEGVRRFQIFFDDRNTSLPPDTRKAA 703
Query: 356 YRAVL 370
Y +V+
Sbjct: 704 YLSVM 708
>07_01_0180 + 1266975-1267550
Length = 191
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 166 QHHQEAGLGRRREGEPSRYSAQKLG 240
+HH EAG+ RRR GE R +A +G
Sbjct: 136 RHHAEAGVLRRRLGEAQRNAAVLIG 160
>12_01_0612 -
5044639-5044858,5045010-5045167,5045440-5045684,
5046006-5046294,5047540-5048561,5049320-5049389
Length = 667
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 113 TQTPLDEPLKQ--YGRKLYANITKKLGWDAEEKESHLDTLLRSLVLNKMISFEDPDTIKE 286
T+ L E ++Q + K Y ++L D EEKE+ + LL+ + + D +T +
Sbjct: 532 TKEMLSECVEQMEFNAKFYHEQIERLRKDTEEKENEFERLLQEELARAIECDVDSETTEN 591
Query: 287 AKNRFER 307
K R E+
Sbjct: 592 CKLREEQ 598
>08_02_0860 + 21970888-21971833,21973400-21974127
Length = 557
Score = 28.3 bits (60), Expect = 2.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = +2
Query: 101 SALFTQTPLDEPLKQYGRKLYAN-----ITKKLGWDAEEKESHLDTLLRSLVLN 247
+A TQT L P KQY R ++ + + GW A + + LDTL +N
Sbjct: 451 AAAVTQTYLGRPWKQYSRVVFMQSYIGAVVRPEGWLAWDGQFALDTLYYGEYMN 504
>09_04_0017 +
13821348-13823404,13823546-13823819,13823916-13824238,
13824491-13824604,13825357-13825422,13825638-13825764
Length = 986
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 287 AKNRFERHMCGSRSLPADLRSACYRAVLAEAAEPTFHRFL 406
A + E C LPADLRS Y + P FH L
Sbjct: 144 AHHLLEGFRCVPTFLPADLRSRFYHGFCKQQLWPLFHYML 183
>05_05_0240 +
23548408-23549408,23549882-23549980,23550282-23550354,
23550416-23550478
Length = 411
Score = 27.9 bits (59), Expect = 3.2
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 5 EDFLQFLKLMEAFSNETNFTVWSTISNCISKLSAL 109
+ LQ +KLM+ + + ++T+ NC+ +L L
Sbjct: 195 DQMLQEVKLMDELGHSPDIVTYNTVINCLRRLGRL 229
>01_06_1723 -
39443176-39443505,39443615-39443710,39443834-39443902,
39444381-39444443,39444521-39444598,39444725-39444838,
39445727-39445804,39446457-39446522,39446739-39446804,
39446896-39447003,39447355-39447432,39447951-39448010,
39448087-39448191,39448407-39448595,39448922-39448985,
39449244-39449385,39449494-39449654,39449952-39450076,
39450230-39450300,39450410-39450560,39450713-39450769,
39451049-39451143,39451331-39451379
Length = 804
Score = 27.9 bits (59), Expect = 3.2
Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 8/111 (7%)
Frame = +2
Query: 98 LSALFTQTPLDEPLKQYGRKLYANITK-KLGWDAEEKESHLDTLLRSLVLNKMISFEDPD 274
LS + Q LD+ G + Y NI K K + ++ LDT +L + S
Sbjct: 582 LSPTYFQYFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTILLDIPSLGKQS 641
Query: 275 TIKEAKNRF-ERHMCGSRSL------PADLRSACYRAVLAEAAEPTFHRFL 406
T + ++F R M + +L P D + YRA+L E F R L
Sbjct: 642 TAAASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQRIL 692
>12_01_0721 + 6353254-6353646
Length = 130
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 299 FERHMCGSRSLPADLRSACYRAVLAEAAEPTFH 397
F+ H C + LP LR+ YR + P H
Sbjct: 89 FQPHCCSNHDLPGQLRAVKYRVLCGNHPGPCPH 121
>02_04_0585 -
24088344-24089366,24089833-24090075,24090305-24090655,
24090736-24090823,24091178-24091275,24091813-24092025,
24092150-24092245,24093124-24093195,24093909-24094067
Length = 780
Score = 27.5 bits (58), Expect = 4.3
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 71 STISNCISKLSALFTQTPLDEPLKQYGRKLYANITKKLGWDAEEKESHLDTLLRSLVLNK 250
++I + L L+ + + G LY+++ +L D + H ++ LVL+
Sbjct: 663 NSIDPLLRLLEHLYNKNVFKATDLETGCLLYSSLLDELAIDLPKAPVHFGEVIGRLVLSH 722
Query: 251 MISFE-DPDTIKEAKNRFER 307
+S E DT+K+ ++ F R
Sbjct: 723 CLSIEVVEDTLKKIEDSFFR 742
>02_05_0287 -
27525722-27525812,27525927-27526057,27526945-27527022,
27527080-27527186,27527302-27527380,27528001-27528096,
27528192-27528443,27528691-27528840,27528953-27529277,
27529373-27529584
Length = 506
Score = 27.1 bits (57), Expect = 5.6
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +2
Query: 173 TKKLGWDAE---EKESHLDTLLRSLVLNKMISFEDPDTIKEAKNRFERHMCGSRSLPADL 343
T W A+ E + + ++ L K+IS+E + + + F + G S P D+
Sbjct: 160 TSLASWAAQPSVELKDSISAMIFDLTAKKLISYEPSKSSENLRKNFVAFIRGLISFPVDI 219
Query: 344 RSACY 358
Y
Sbjct: 220 PGTAY 224
>01_06_0842 - 32365240-32365615,32365772-32366127
Length = 243
Score = 26.6 bits (56), Expect = 7.5
Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +2
Query: 68 WSTISNCISKLSALFTQTPLDEPLKQYGRKLYANITKKLGWDAEEKESHLDTLLRSLVLN 247
W+ + +C+S S L + PL+++ + T + W E L LR +
Sbjct: 145 WAPVLSCLSSKSGLSPWSNKSSPLRKFELAFHETYTAQKLWKVPSPE--LRGRLRKTITE 202
Query: 248 KMISFEDPDTIK--EAKNRFERHMCGSRSLPADL 343
+++S ++ E K R G+ + PADL
Sbjct: 203 RVVSGYREYLLEHPELKRLVSR---GNSNTPADL 233
>10_08_0048 -
14441540-14441620,14442044-14442111,14442275-14442493,
14442506-14444508,14447541-14448410,14448533-14448576,
14449920-14450093
Length = 1152
Score = 26.2 bits (55), Expect = 9.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 188 WDAEEKESHLDTLLRSLVLNKMIS 259
W A EK H+D + R VL+K+I+
Sbjct: 462 WRAYEKHIHMDGVPRKSVLSKLIT 485
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,433,539
Number of Sequences: 37544
Number of extensions: 193775
Number of successful extensions: 585
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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