Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P03
(530 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q23271 Cluster: Putative uncharacterized protein; n=2; ... 33 3.1
UniRef50_A6V9N2 Cluster: Transcriptional regulator, LysR family;... 33 4.1
UniRef50_A2EXK5 Cluster: Surface antigen BspA-like; n=1; Trichom... 33 4.1
UniRef50_UPI00006CE95A Cluster: hypothetical protein TTHERM_0056... 33 5.4
UniRef50_Q3HLP3 Cluster: VanWG; n=4; Enterococcus faecalis|Rep: ... 33 5.4
UniRef50_A3Y2I3 Cluster: PHP N-terminal domain protein; n=1; Vib... 32 7.2
UniRef50_Q8ILE0 Cluster: Putative uncharacterized protein; n=1; ... 32 7.2
UniRef50_P09975 Cluster: Protein ycf2; n=2; cellular organisms|R... 32 9.5
>UniRef50_Q23271 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 1152
Score = 33.5 bits (73), Expect = 3.1
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 287 SLILRNQVSHVFRITVYERNSFKNSKVLFNYSTKVLFSYSVFTNSALSVIHQN 445
S+ L+ V ++ + Y+ F+N + VLFSYS+ T ++ ++ +N
Sbjct: 699 SIFLKLPVRYILSVMEYQHEKFENVRSKITARAAVLFSYSLPTPESMQIVAEN 751
>UniRef50_A6V9N2 Cluster: Transcriptional regulator, LysR family;
n=1; Pseudomonas aeruginosa PA7|Rep: Transcriptional
regulator, LysR family - Pseudomonas aeruginosa PA7
Length = 309
Score = 33.1 bits (72), Expect = 4.1
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 70 GDLL-ILPDWAATTLKLEKLSPNTNRCVPAASRENQYVS-RLSVLTLLD 210
GDL +LP+WAA L + + P VPA ++S RL V+T LD
Sbjct: 260 GDLRQVLPEWAARELVVHAVFPTRRGMVPAVRALLDFLSDRLPVMTALD 308
>UniRef50_A2EXK5 Cluster: Surface antigen BspA-like; n=1;
Trichomonas vaginalis G3|Rep: Surface antigen BspA-like
- Trichomonas vaginalis G3
Length = 898
Score = 33.1 bits (72), Expect = 4.1
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +2
Query: 329 TVY--ERNSFKNSKVLFNYSTKVLFSYSVFTNSALSVIHQNDAIDYAYISEVGHSCF*NC 502
TVY + N+F+N +L+ S + + N+ S Q ID ++E+G +CF NC
Sbjct: 411 TVYCIDDNAFENCSLLWKVSLPI--NVKKLGNNVFSYCSQLIDIDLTNVNEIGANCFGNC 468
Query: 503 *THECTN 523
E N
Sbjct: 469 PCLESVN 475
>UniRef50_UPI00006CE95A Cluster: hypothetical protein TTHERM_00561610;
n=2; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00561610 - Tetrahymena thermophila SB210
Length = 1368
Score = 32.7 bits (71), Expect = 5.4
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 272 NKGIISLILRNQVSHVFRITVYE-RNSFK-NSKVLFNYSTKVLFSYSVFTNSALSVIHQN 445
NK I L+ N V ++++ + R FK N + +++YS+ V F Y ++ ++ QN
Sbjct: 928 NKFINLLLYSNLTKQVLKLSLNKVRKEFKANKQNIYDYSSDVYFQYCTIQQASFQILQQN 987
>UniRef50_Q3HLP3 Cluster: VanWG; n=4; Enterococcus faecalis|Rep:
VanWG - Enterococcus faecalis (Streptococcus faecalis)
Length = 281
Score = 32.7 bits (71), Expect = 5.4
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +2
Query: 248 STEPVPCK-----NKGIISLILRNQVSHVFRITVYERNSFKNSKVLFNYSTKVLFSYSVF 412
+TE +PC N+G + L LRN + F+I + ++F ++L S + Y+VF
Sbjct: 166 TTEDLPCGTDATINEGWLDLKLRNDTDNTFQIEISFDDNFMYGRILSQSSVNI--EYTVF 223
Query: 413 TNSALSVIHQNDAI 454
NS++S + + +
Sbjct: 224 -NSSVSYFKREEKV 236
>UniRef50_A3Y2I3 Cluster: PHP N-terminal domain protein; n=1; Vibrio
sp. MED222|Rep: PHP N-terminal domain protein - Vibrio
sp. MED222
Length = 903
Score = 32.3 bits (70), Expect = 7.2
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +2
Query: 338 ERNSFKNSKVLFN-YSTKVLFSYSVFTNSALSVIHQNDAIDYA 463
E ++F S+ + YS K+L+ + NS LSVI ++D ++YA
Sbjct: 383 EEDTFNTSRFPVSIYSQKMLYEMATKPNSFLSVIDESDTVNYA 425
>UniRef50_Q8ILE0 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1585
Score = 32.3 bits (70), Expect = 7.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 335 YERNSFKNSKVLFNYSTKVLFSYSVFTNSALSVIHQNDAID 457
Y + FK+ K F+ S K + S F N+++++ QN+A D
Sbjct: 163 YSKKLFKDKKETFDISEKFIKSLEFFWNNSINLYFQNNATD 203
>UniRef50_P09975 Cluster: Protein ycf2; n=2; cellular organisms|Rep:
Protein ycf2 - Marchantia polymorpha (Liverwort)
Length = 2136
Score = 31.9 bits (69), Expect = 9.5
Identities = 19/65 (29%), Positives = 37/65 (56%)
Frame = +2
Query: 284 ISLILRNQVSHVFRITVYERNSFKNSKVLFNYSTKVLFSYSVFTNSALSVIHQNDAIDYA 463
I +IL NQ + F ++ ++ KN + +YS FSY +F L+++++N+ +
Sbjct: 977 IEIILNNQ--NYFEKSLLKKTYLKNLNLNNSYSK---FSYKIFIFQLLNILNKNNYKTFQ 1031
Query: 464 YISEV 478
+ISE+
Sbjct: 1032 WISEL 1036
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,741,591
Number of Sequences: 1657284
Number of extensions: 9767330
Number of successful extensions: 21248
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21238
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33873797511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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