Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P03
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.2  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.1  
AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    21   5.1  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.9  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +3

Query: 339 SVIVSKTAKFSLIILQKYYFRIVYLQIQPCPLYIKM 446
           S +   TA+F++    +Y FR++      CP+ + +
Sbjct: 263 STVFVPTARFTVEQGYRYRFRVINAGFLNCPIEVSI 298


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -1

Query: 215 MWSRRVSTLSLETYWFSRDAA 153
           +WS +V   SLET  + R AA
Sbjct: 512 LWSEQVGPDSLETRIWPRSAA 532


>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 292 KTYYPFVFTRYRLS 251
           +T+YP VFTR  L+
Sbjct: 18  RTHYPDVFTREELA 31


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 222 LISGEIVVKALSLYRVKTKG 281
           +ISG I +   S YR+   G
Sbjct: 237 IISGSIFMTTTSFYRILNSG 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,481
Number of Sequences: 336
Number of extensions: 2585
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)