Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P03
         (530 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414686-1|ABD75710.1|  354|Drosophila melanogaster MTERF3 protein.    28   6.9  
AY051744-1|AAK93168.1|  354|Drosophila melanogaster LD27042p pro...    28   6.9  
AE014296-3392|AAF51620.1|  354|Drosophila melanogaster CG5047-PA...    28   6.9  
AY094938-1|AAM11291.1|  449|Drosophila melanogaster RH55021p pro...    28   9.1  
AE013599-1183|AAF58743.3|  449|Drosophila melanogaster CG12344-P...    28   9.1  

>DQ414686-1|ABD75710.1|  354|Drosophila melanogaster MTERF3 protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 245 QSTEPVPCKNKGIISLILRNQVSHV--FRITVYERNS 349
           + TEP  C+    ++L  RN+ +HV  F +  Y  NS
Sbjct: 54  KKTEPAECEGSKEVALDFRNREAHVPSFNLAAYVNNS 90


>AY051744-1|AAK93168.1|  354|Drosophila melanogaster LD27042p
           protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 245 QSTEPVPCKNKGIISLILRNQVSHV--FRITVYERNS 349
           + TEP  C+    ++L  RN+ +HV  F +  Y  NS
Sbjct: 54  KKTEPAECEGSKEVALDFRNREAHVPSFNLAAYVNNS 90


>AE014296-3392|AAF51620.1|  354|Drosophila melanogaster CG5047-PA
           protein.
          Length = 354

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 245 QSTEPVPCKNKGIISLILRNQVSHV--FRITVYERNS 349
           + TEP  C+    ++L  RN+ +HV  F +  Y  NS
Sbjct: 54  KKTEPAECEGSKEVALDFRNREAHVPSFNLAAYVNNS 90


>AY094938-1|AAM11291.1|  449|Drosophila melanogaster RH55021p
           protein.
          Length = 449

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 330 LYMSVIVSKTAKFSLIILQKYYFRIVYLQIQPCPLYIK 443
           LY +  V   A+   II  +  F++  + IQ CP+YI+
Sbjct: 145 LYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIE 182


>AE013599-1183|AAF58743.3|  449|Drosophila melanogaster CG12344-PA
           protein.
          Length = 449

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 330 LYMSVIVSKTAKFSLIILQKYYFRIVYLQIQPCPLYIK 443
           LY +  V   A+   II  +  F++  + IQ CP+YI+
Sbjct: 145 LYKNKTVRYAARMHAIIACQMEFQLYPMDIQVCPIYIE 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,342,245
Number of Sequences: 53049
Number of extensions: 441734
Number of successful extensions: 1019
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)