Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P03
(530 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.052
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.6
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 3.4
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 22 3.4
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 22 3.4
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 5.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 5.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 5.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 21 7.9
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 7.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 7.9
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.052
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 330 LYMSVIVSKTAKFSLIILQKYYFRIVYLQIQPCPLYIK 443
LY + V +A+ II + F++ + IQ CP+YI+
Sbjct: 98 LYRNKTVKYSARMHAIIACQMEFQLYPMDIQICPIYIE 135
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 524 SSYTHESNNFKNNY 483
S+Y + +NN+ NNY
Sbjct: 92 SNYNNYNNNYNNNY 105
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -1
Query: 524 SSYTHESNNFKNNY 483
S+Y + +NN+ NNY
Sbjct: 92 SNYNNYNNNYNNNY 105
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 3.4
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = -1
Query: 512 HESNNFKNNYVLLLKYKRNQWRHF 441
H +NN+ NN Y N + ++
Sbjct: 91 HNNNNYNNNNYNNYNYNNNNYNNY 114
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 NSKVLFNYSTKVLFSYSVFTNSA 424
N+K F YS +L +++F N+A
Sbjct: 4 NTKQAFIYSLALLCLHAIFVNAA 26
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 22.2 bits (45), Expect = 3.4
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 NSKVLFNYSTKVLFSYSVFTNSA 424
N+K F YS +L +++F N+A
Sbjct: 4 NTKQAFIYSLALLCLHAIFVNAA 26
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 524 SSYTHESNNFKNNYVLLLKY 465
S+Y + +NN+ NY L Y
Sbjct: 92 SNYNNYNNNYNTNYKKLQYY 111
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 524 SSYTHESNNFKNNYVLLLKY 465
S+Y + +NN+ NY L Y
Sbjct: 92 SNYNNYNNNYNTNYKKLQYY 111
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 524 SSYTHESNNFKNNYVLLLKY 465
S+Y + +NN+ NY L Y
Sbjct: 92 SNYNNYNNNYNTNYKKLQYY 111
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 524 SSYTHESNNFKNNYVLLLKY 465
S+Y + +NN+ NY L Y
Sbjct: 92 SNYNNYNNNYNTNYKKLQYY 111
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 524 SSYTHESNNFKNNYVLLLKY 465
S+Y + +NN+ NY L Y
Sbjct: 92 SNYNNYNNNYNTNYKKLQYY 111
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 524 SSYTHESNNFKNNYVLLLKY 465
S+Y + +NN+ NY L Y
Sbjct: 92 SNYNNYNNNYNTNYKKLQYY 111
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 5.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 524 SSYTHESNNFKNNYVLLLKY 465
S+Y + +NN+ NY L Y
Sbjct: 92 SNYNNYNNNYNTNYKKLQYY 111
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 5.9
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1
Query: 524 SSYTHESNNFKNNY 483
++Y + +NN+ NNY
Sbjct: 335 NNYNNYNNNYNNNY 348
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 521 SYTHESNNFKNNYVLLLKYKRNQW 450
+Y + NN+ NNY YK+ Q+
Sbjct: 93 NYNNNYNNYNNNY--NTNYKKLQY 114
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.0 bits (42), Expect = 7.9
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1
Query: 274 QRDNKSYIKKSSL 312
Q+DNKSY+ SL
Sbjct: 105 QKDNKSYLSLRSL 117
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 524 SSYTHESNNFKNNYVLLLKYK 462
++Y + +NN NNY L YK
Sbjct: 328 NNYNNYNNNNYNNYNKKLYYK 348
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,654
Number of Sequences: 438
Number of extensions: 2864
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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