Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P02
         (413 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2921|AAF57537.1|  632|Drosophila melanogaster CG15904-P...    29   2.4  
BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p pro...    28   4.3  
AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquit...    28   4.3  
AF416571-1|AAL09691.1| 1061|Drosophila melanogaster ubiquitin-pr...    28   4.3  
AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin...    28   4.3  
AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA...    28   4.3  

>AE013599-2921|AAF57537.1|  632|Drosophila melanogaster CG15904-PA
           protein.
          Length = 632

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -3

Query: 201 KLFLVRTGS*YVLPLKFKHMPINPTN--ESNFVHGFINIIFLRGF 73
           K +LVRT   Y +P  FK     PTN  E NF+HG    +FL GF
Sbjct: 212 KGYLVRTPILYDMPRVFKSD--RPTNRYEKNFIHGTSGNLFL-GF 253


>BT021410-1|AAX33558.1| 1061|Drosophila melanogaster LD06566p
           protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 144 MPINPTNESNFVHGFINIIFLRGFSYHFLRIKVD*CTL 31
           +P+   N+  +V  ++N  F+RG    FL ++   C L
Sbjct: 880 IPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCEL 917


>AF464851-1|AAM09646.1| 1061|Drosophila melanogaster Smad-ubiquitin
           E3 ligase Smurf1 protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 144 MPINPTNESNFVHGFINIIFLRGFSYHFLRIKVD*CTL 31
           +P+   N+  +V  ++N  F+RG    FL ++   C L
Sbjct: 880 IPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCEL 917


>AF416571-1|AAL09691.1| 1061|Drosophila melanogaster
           ubiquitin-protein ligase protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 144 MPINPTNESNFVHGFINIIFLRGFSYHFLRIKVD*CTL 31
           +P+   N+  +V  ++N  F+RG    FL ++   C L
Sbjct: 880 IPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCEL 917


>AF216521-1|AAF21125.1| 1061|Drosophila melanogaster E3 ubiquitin
           ligase protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 144 MPINPTNESNFVHGFINIIFLRGFSYHFLRIKVD*CTL 31
           +P+   N+  +V  ++N  F+RG    FL ++   C L
Sbjct: 880 IPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCEL 917


>AE013599-2520|AAF57824.3| 1061|Drosophila melanogaster CG4943-PA
           protein.
          Length = 1061

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 144 MPINPTNESNFVHGFINIIFLRGFSYHFLRIKVD*CTL 31
           +P+   N+  +V  ++N  F+RG    FL ++   C L
Sbjct: 880 IPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCEL 917


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,344,790
Number of Sequences: 53049
Number of extensions: 314480
Number of successful extensions: 518
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)