Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_P01
         (547 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   0.40 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   0.93 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   1.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   3.8  
AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase p...    24   3.8  
AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.         24   3.8  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   5.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   6.6  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   6.6  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.1 bits (57), Expect = 0.40
 Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
 Frame = +1

Query: 271  DVRGAQDRAGRDHAGDQGAG-PADQEQEGDPEGRVE-----AREAIHEA-----GDAAEQ 417
            D  G +   G    G++G+G P +++++G+ + R       +R+   +A     GD+  +
Sbjct: 913  DASGGEVGGGGGSGGEEGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSE 972

Query: 418  PRPGQGPLRRETPGGN-GKTRRGHVRDE 498
               G+G  +R+  G + G+ +R    DE
Sbjct: 973  EEEGEGSRKRKKKGASGGQKKRQKAMDE 1000


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +2

Query: 314  EIKELARQIRNKKAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLREEMEKL 475
            EIK   R ++  K  +      V+ +   +   N         A KLREE+E++
Sbjct: 922  EIKTSERNVQKSKDKINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEM 975


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 412 EQPRPGQGPLRRETPG 459
           E PRPGQ P +  +PG
Sbjct: 439 EPPRPGQSPTQSPSPG 454


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
 Frame = +1

Query: 274 VRGAQDRAGRDHAGDQGAGPADQEQEGDPEGRVEAREAIHEAGDAAEQPRPGQGPLRRET 453
           VRG +   G    G++G   A  E+     G         E GD  E   PG+   + + 
Sbjct: 266 VRGERGDKGVCIKGEKGQKGAKGEEVYGATGTTTTTGPKGEKGDRGEPGEPGRSGEKGQA 325

Query: 454 PGGNGKT-RRGH 486
            G  G+   RGH
Sbjct: 326 -GDRGQVGERGH 336


>AJ237705-1|CAB40346.1|  557|Anopheles gambiae putative apyrase
           protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 293 ELDETMREIKELARQIRNKKAILKDESRLVKQSTK-PVMPRNSRARDKGRSAGKLREEME 469
           E D+ ++ ++     +  KK I    + L++ +   P +PR+   + KGRS G +    +
Sbjct: 131 EFDDGLKGLRPYLSALA-KKDIQTVATNLIRSTDPFPALPRSVTIKRKGRSIGIIGVIAD 189

Query: 470 KLGVDMSETKQAHF 511
           K   ++S T+   F
Sbjct: 190 KTH-ELSNTESITF 202


>AJ237704-1|CAB40345.1|  557|Anopheles gambiae apyrase protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = +2

Query: 293 ELDETMREIKELARQIRNKKAILKDESRLVKQSTK-PVMPRNSRARDKGRSAGKLREEME 469
           E D+ ++ ++     +  KK I    + L++ +   P +PR+   + KGRS G +    +
Sbjct: 131 EFDDGLKGLRPYLSALA-KKDIQTVATNLIRSTDPFPALPRSVTIKRKGRSIGIIGVIAD 189

Query: 470 KLGVDMSETKQAHF 511
           K   ++S T+   F
Sbjct: 190 KTH-ELSNTESITF 202


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 100 VSLFQLDLPLELAFPRF 50
           VSL Q D P+ L+FP F
Sbjct: 255 VSLCQYDSPILLSFPHF 271


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 299 DETMREIKELARQIRNKKA 355
           +E   E+KE+AR +  KKA
Sbjct: 412 EELAEELKEIARSLNPKKA 430


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 12/48 (25%), Positives = 24/48 (50%)
 Frame = +2

Query: 329 ARQIRNKKAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLREEMEK 472
           A  +RN +   + E  +   S   V+ R  R  + G+S+ + RE+ ++
Sbjct: 143 AVSLRNVEVQAQPEEDIDHSSFVEVVRRKPRGINSGKSSSQQREQQQR 190


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,953
Number of Sequences: 2352
Number of extensions: 9074
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)