Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_P01
(547 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 91 6e-19
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 91 6e-19
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.41
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.41
Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical pr... 31 0.72
AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical ... 31 0.72
Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical p... 29 2.2
Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z82276-6|CAJ15166.1| 305|Caenorhabditis elegans Hypothetical pr... 28 5.0
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 6.7
U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protei... 27 6.7
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 27 8.8
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 27 8.8
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 27 8.8
U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical p... 27 8.8
L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated p... 27 8.8
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 90.6 bits (215), Expect = 6e-19
Identities = 48/134 (35%), Positives = 73/134 (54%)
Frame = +2
Query: 98 DDYVLDLKKNYLEIAEEERHDIIPEIWEGHNIADYIDLDIFDXXXXXXXXXXXXXXGGMY 277
DDY+LDLKK+Y+ +E++DI+PEIWEGHN+AD++D +I G Y
Sbjct: 456 DDYILDLKKHYMLKNPDEKYDIVPEIWEGHNLADFVDPEIQSKLENLLREEELLEQAGEY 515
Query: 278 AVPKIELDETMREIKELARQIRNKKAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLR 457
DE +E +LA QIR K+ +L + + K+ + R +R + RS +L
Sbjct: 516 ESDLDSDDEETKEKLKLALQIREKEKLLTLDHAVNKRIAGRIGSRIHGSRKRDRSMSRLE 575
Query: 458 EEMEKLGVDMSETK 499
E+ +LGVD+ K
Sbjct: 576 NELGELGVDVDTKK 589
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 90.6 bits (215), Expect = 6e-19
Identities = 48/134 (35%), Positives = 73/134 (54%)
Frame = +2
Query: 98 DDYVLDLKKNYLEIAEEERHDIIPEIWEGHNIADYIDLDIFDXXXXXXXXXXXXXXGGMY 277
DDY+LDLKK+Y+ +E++DI+PEIWEGHN+AD++D +I G Y
Sbjct: 456 DDYILDLKKHYMLKNPDEKYDIVPEIWEGHNLADFVDPEIQSKLENLLREEELLEQAGEY 515
Query: 278 AVPKIELDETMREIKELARQIRNKKAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLR 457
DE +E +LA QIR K+ +L + + K+ + R +R + RS +L
Sbjct: 516 ESDLDSDDEETKEKLKLALQIREKEKLLTLDHAVNKRIAGRIGSRIHGSRKRDRSMSRLE 575
Query: 458 EEMEKLGVDMSETK 499
E+ +LGVD+ K
Sbjct: 576 NELGELGVDVDTKK 589
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +2
Query: 281 VPKIELDETMREIKELARQIRN----KKAILKDESRLVKQSTKPVMPRNSRARDKGRSAG 448
+ K +L+E I+ L + N K A+ DES + + TK + +
Sbjct: 254 IVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKS 313
Query: 449 KLREEMEKL 475
+LRE+M++L
Sbjct: 314 ELREQMDRL 322
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 31.5 bits (68), Expect = 0.41
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +2
Query: 281 VPKIELDETMREIKELARQIRN----KKAILKDESRLVKQSTKPVMPRNSRARDKGRSAG 448
+ K +L+E I+ L + N K A+ DES + + TK + +
Sbjct: 254 IVKKQLEEAQSSIENLKKDAENERNLKTALESDESSAISEITKQMEAAKKELEASEKEKS 313
Query: 449 KLREEMEKL 475
+LRE+M++L
Sbjct: 314 ELREQMDRL 322
>Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 30.7 bits (66), Expect = 0.72
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 262 SRWDVRGAQDRAGRDHAGDQGAGPADQEQEGDPEGRVEAREAIHEAGDA---AEQPRPGQ 432
+ W RG GR G +GA ++Q+GD + E + I +GD ++
Sbjct: 178 THWRTRGRGGARGRGGRG-RGAPRQTRDQDGDEKDEKEKSDTIENSGDGETRGKRRTRRH 236
Query: 433 GPLRRETPGG 462
G L+ + P G
Sbjct: 237 GKLQPDAPSG 246
>AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 30.7 bits (66), Expect = 0.72
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +1
Query: 262 SRWDVRGAQDRAGRDHAGDQGAGPADQEQEGDPEGRVEAREAIHEAGDA---AEQPRPGQ 432
+ W RG GR G +GA ++Q+GD + E + I +GD ++
Sbjct: 178 THWRTRGRGGARGRGGRG-RGAPRQTRDQDGDEKDEKEKSDTIENSGDGETRGKRRTRRH 236
Query: 433 GPLRRETPGG 462
G L+ + P G
Sbjct: 237 GKLQPDAPSG 246
>Z99281-12|CAB16521.1| 649|Caenorhabditis elegans Hypothetical
protein Y57G11C.20 protein.
Length = 649
Score = 29.1 bits (62), Expect = 2.2
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 311 REIKELARQIRNK-KAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLREE 463
RE E RQ + KA+ K++ ++Q K + RARDK R K REE
Sbjct: 348 REHLERHRQAEARAKALEKEKHERLQQEAKD--KEDERARDKARKDAKAREE 397
>Z74037-4|CAA98490.1| 295|Caenorhabditis elegans Hypothetical
protein F57B7.3 protein.
Length = 295
Score = 28.7 bits (61), Expect = 2.9
Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 280 GAQDRAGRDHAGDQGA-GPADQEQEGDPEGRVEAREAIHEAGDAAEQPRPGQGPLRRETP 456
GA G D G GA GP+ Q + G+ A GDA +PGQ + P
Sbjct: 138 GAPGPQGPD--GAPGAPGPSGQPGQDGASGQPGAPGVAGPQGDAGTPGQPGQQG-QDGRP 194
Query: 457 GGNGKTRRG 483
G NG+ RG
Sbjct: 195 GQNGRRGRG 203
>Z82276-6|CAJ15166.1| 305|Caenorhabditis elegans Hypothetical
protein K03D3.12 protein.
Length = 305
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/39 (28%), Positives = 25/39 (64%)
Frame = -1
Query: 166 YDIVPFLLGYLQVVLL*IEHVIVSLFQLDLPLELAFPRF 50
+ ++ FL+G + V+++ ++V LF ++ L + FP+F
Sbjct: 95 FKLLNFLIGCVLVIIVQAFDIVVLLFAIEKWLSIFFPKF 133
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 316 DQGAGPADQEQEGDPEGRVEAREAIHEAGDAAEQPRPGQGPLRRETPGGNGKTRRGHVRD 495
D G G + ++G + E+R+ GD+ E + G+G + G + + RR H +
Sbjct: 301 DAGGGEDREPEKGRKQEHKESRDRRPARGDSGEVEKRGRG---EKAEGRDEQERRSHGSE 357
Query: 496 E 498
E
Sbjct: 358 E 358
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical
protein F35G12.8 protein.
Length = 1549
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 347 KKAILKDESRLVKQSTKPVMPRNSRA-RDKGRSAGKLREEMEKL 475
K IL D++++ KQ T P + A RD GKLR+E ++L
Sbjct: 767 KGLILTDKNKMAKQVT----PEDKAAERDLAEKLGKLRDEADEL 806
>U55366-4|AAA97982.1| 310|Caenorhabditis elegans Collagen protein
139 protein.
Length = 310
Score = 27.5 bits (58), Expect = 6.7
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 313 GDQGA--GPADQEQEGDPEGRVEAREAIHEAGDAAEQPRPG-QGPLRRE-TPGGNGK 471
G +GA GP ++G P + + E G +PG +GP + +PGGNG+
Sbjct: 194 GPKGAPGGPGQPGRDGQPGQAGQPGSSSSEPGQPGPNGQPGPRGPPGQAGSPGGNGQ 250
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 293 ELDETMREIKELARQIRNKKAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLREEMEK 472
E D + +Q+ +++ LK + + +ST+ V +R K EE+E+
Sbjct: 1015 ERDTNKDALTNFEKQVTDERNNLKVKEKSANESTEKVKELQNRLTAK-------EEELER 1067
Query: 473 LGVDMSETKQA 505
L D+ TK+A
Sbjct: 1068 LNTDLRLTKEA 1078
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 293 ELDETMREIKELARQIRNKKAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLREEMEK 472
E D + +Q+ +++ LK + + +ST+ V +R K EE+E+
Sbjct: 1015 ERDTNKDALTNFEKQVTDERNNLKVKEKSANESTEKVKELQNRLTAK-------EEELER 1067
Query: 473 LGVDMSETKQA 505
L D+ TK+A
Sbjct: 1068 LNTDLRLTKEA 1078
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical protein
C34E11.3 protein.
Length = 1577
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +2
Query: 293 ELDETMREIKELARQIRNKKAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLREEMEK 472
E D + +Q+ +++ LK + + +ST+ V +R K EE+E+
Sbjct: 1015 ERDTNKDALTNFEKQVTDERNNLKVKEKSANESTEKVKELQNRLTAK-------EEELER 1067
Query: 473 LGVDMSETKQA 505
L D+ TK+A
Sbjct: 1068 LNTDLRLTKEA 1078
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 287 KIELDETMREIKELARQIRNKKAILKDESRLVKQSTKPVMPRNSRARDKGRSAGKLREEM 466
K L E M +++EL Q+ + L+ + + + V + RD + +LRE+M
Sbjct: 1067 KDHLAEKMGKVEELNNQLMKRDEELQHQLTRYDEESANVTLMQKQMRDMQTTIDELREDM 1126
Query: 467 E 469
E
Sbjct: 1127 E 1127
>U20861-11|AAA62291.2| 1714|Caenorhabditis elegans Hypothetical
protein C28H8.3 protein.
Length = 1714
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +2
Query: 311 REIKELARQIRNKKAILKDESRLVKQSTKPVMPRNSRAR-DKGRSAGKLREEMEKLGVDM 487
RE++ + K ++KDES+LVK + + + + DK AG +++ E + M
Sbjct: 1170 RELEYMETDEFKNKYMIKDESKLVKLAKRKRDDAEKKKKGDKDEDAGPEKDDDEMDVLAM 1229
Query: 488 SETKQA 505
+ K A
Sbjct: 1230 KKAKLA 1235
>L14433-8|AAA27971.3| 1249|Caenorhabditis elegans Uncoordinated
protein 36 protein.
Length = 1249
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 116 LKKNYLEIAEEERHDIIPEIWEG-HNIADYI 205
LK+NY ++ EEE+ D E+ + H I DY+
Sbjct: 49 LKQNYEKLVEEEQFDPRAELKKSKHRIEDYL 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,739,377
Number of Sequences: 27780
Number of extensions: 204926
Number of successful extensions: 893
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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