Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_O20
         (644 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D89858-1|BAA14031.1|  341|Homo sapiens D-aspartate oxidase protein.    39   0.013
BC032786-1|AAH32786.3|  369|Homo sapiens D-aspartate oxidase pro...    39   0.013
AL050350-3|CAI42511.1|  341|Homo sapiens D-aspartate oxidase pro...    39   0.013
AL050350-2|CAI42510.1|  369|Homo sapiens D-aspartate oxidase pro...    39   0.013
AL050350-1|CAI42509.1|  310|Homo sapiens D-aspartate oxidase pro...    39   0.013

>D89858-1|BAA14031.1|  341|Homo sapiens D-aspartate oxidase protein.
          Length = 341

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 24/74 (32%), Positives = 39/74 (52%)
 Frame = +1

Query: 256 TVAKFLQKELRNANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFW 435
           + A  + K +   +VTII+D F   TTS VAAG+  P  ++        K+W  E++N  
Sbjct: 17  STAVCISKLVPRCSVTIISDKFTPDTTSDVAAGMLIP-HTYPDTPIHTQKQWFRETFNHL 75

Query: 436 QEIMMSPDSLNAGI 477
             I  S ++ +AG+
Sbjct: 76  FAIANSAEAGDAGV 89


>BC032786-1|AAH32786.3|  369|Homo sapiens D-aspartate oxidase
           protein.
          Length = 369

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 24/74 (32%), Positives = 39/74 (52%)
 Frame = +1

Query: 256 TVAKFLQKELRNANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFW 435
           + A  + K +   +VTII+D F   TTS VAAG+  P  ++        K+W  E++N  
Sbjct: 45  STAVCISKLVPRCSVTIISDKFTPDTTSDVAAGMLIP-HTYPDTPIHTQKQWFRETFNHL 103

Query: 436 QEIMMSPDSLNAGI 477
             I  S ++ +AG+
Sbjct: 104 FAIANSAEAGDAGV 117


>AL050350-3|CAI42511.1|  341|Homo sapiens D-aspartate oxidase
           protein.
          Length = 341

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 24/74 (32%), Positives = 39/74 (52%)
 Frame = +1

Query: 256 TVAKFLQKELRNANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFW 435
           + A  + K +   +VTII+D F   TTS VAAG+  P  ++        K+W  E++N  
Sbjct: 17  STAVCISKLVPRCSVTIISDKFTPDTTSDVAAGMLIP-HTYPDTPIHTQKQWFRETFNHL 75

Query: 436 QEIMMSPDSLNAGI 477
             I  S ++ +AG+
Sbjct: 76  FAIANSAEAGDAGV 89


>AL050350-2|CAI42510.1|  369|Homo sapiens D-aspartate oxidase
           protein.
          Length = 369

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 24/74 (32%), Positives = 39/74 (52%)
 Frame = +1

Query: 256 TVAKFLQKELRNANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFW 435
           + A  + K +   +VTII+D F   TTS VAAG+  P  ++        K+W  E++N  
Sbjct: 45  STAVCISKLVPRCSVTIISDKFTPDTTSDVAAGMLIP-HTYPDTPIHTQKQWFRETFNHL 103

Query: 436 QEIMMSPDSLNAGI 477
             I  S ++ +AG+
Sbjct: 104 FAIANSAEAGDAGV 117


>AL050350-1|CAI42509.1|  310|Homo sapiens D-aspartate oxidase
           protein.
          Length = 310

 Score = 39.1 bits (87), Expect = 0.013
 Identities = 24/74 (32%), Positives = 39/74 (52%)
 Frame = +1

Query: 256 TVAKFLQKELRNANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFW 435
           + A  + K +   +VTII+D F   TTS VAAG+  P  ++        K+W  E++N  
Sbjct: 45  STAVCISKLVPRCSVTIISDKFTPDTTSDVAAGMLIP-HTYPDTPIHTQKQWFRETFNHL 103

Query: 436 QEIMMSPDSLNAGI 477
             I  S ++ +AG+
Sbjct: 104 FAIANSAEAGDAGV 117


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,122,441
Number of Sequences: 237096
Number of extensions: 1672900
Number of successful extensions: 3942
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3942
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)