Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_O20
(644 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical... 37 0.014
AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid ... 37 0.014
U64842-9|AAB37081.2| 458|Caenorhabditis elegans Hypothetical pr... 31 0.70
AJ288951-1|CAB97346.1| 458|Caenorhabditis elegans Pellino prote... 31 0.70
Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF497830-1|AAM18108.1| 533|Caenorhabditis elegans putative Na-H... 28 4.9
AF098995-2|AAC67478.2| 538|Caenorhabditis elegans Na/h exchange... 28 4.9
AF098995-1|AAR30204.1| 634|Caenorhabditis elegans Na/h exchange... 28 4.9
>AC084158-28|AAL27265.2| 322|Caenorhabditis elegans Hypothetical
protein Y69A2AR.5 protein.
Length = 322
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 271 LQKELRNANVTIIADAFGEQTTSCVAAGIFRP 366
+Q+ L N VTIIA+ F TTS VAAG+ P
Sbjct: 20 IQERLPNCEVTIIAEKFSPNTTSDVAAGLIEP 51
>AB275890-1|BAF34313.1| 322|Caenorhabditis elegans D-amino acid
oxidase protein.
Length = 322
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 271 LQKELRNANVTIIADAFGEQTTSCVAAGIFRP 366
+Q+ L N VTIIA+ F TTS VAAG+ P
Sbjct: 20 IQERLPNCEVTIIAEKFSPNTTSDVAAGLIEP 51
>U64842-9|AAB37081.2| 458|Caenorhabditis elegans Hypothetical
protein F25B4.2 protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 103 GHVKRRSRWDVTLNAGKRNTIECKLCLLHNVTLV 2
GHV+ R W V N+G+R+ +C +CL+ + +V
Sbjct: 340 GHVQGRHEWGVQENSGQRSG-KCPICLVESERIV 372
>AJ288951-1|CAB97346.1| 458|Caenorhabditis elegans Pellino protein
protein.
Length = 458
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -2
Query: 103 GHVKRRSRWDVTLNAGKRNTIECKLCLLHNVTLV 2
GHV+ R W V N+G+R+ +C +CL+ + +V
Sbjct: 340 GHVQGRHEWGVQENSGQRSG-KCPICLVESERIV 372
>Z81048-3|CAB02841.1| 407|Caenorhabditis elegans Hypothetical
protein C41G7.4 protein.
Length = 407
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 439 EIMMSPDSLNAGIMPLPTYIFSKENYHVTRNHLIE--NIVPIYRAVENDELT 588
EI PDS + PTYI ++ VT N +IVP+Y + +++LT
Sbjct: 17 EISTCPDSGQDVPLLSPTYITPRKRIRVTENLTFNTLDIVPVYSDLPDEKLT 68
>Z48178-3|CAC42246.1| 1553|Caenorhabditis elegans Hypothetical
protein C05C10.2b protein.
Length = 1553
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 289 NANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFWQEIMMSPDSLN 468
N +++I + E T+ GI S+ T++ TKKW E IM+ P +L+
Sbjct: 405 NEPMSVILNNLTEAKTNVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALS 464
>Z48178-2|CAA88201.1| 1551|Caenorhabditis elegans Hypothetical
protein C05C10.2a protein.
Length = 1551
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 289 NANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFWQEIMMSPDSLN 468
N +++I + E T+ GI S+ T++ TKKW E IM+ P +L+
Sbjct: 405 NEPMSVILNNLTEAKTNVEYTGIAFKSASYTVHTEDYTKKWYERIQEEISNIMIYPKALS 464
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 28.3 bits (60), Expect = 4.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Frame = -1
Query: 500 NIYVGKGMMPAFKLSGDIMISC------QKFHDSSIHFLVISLVGPLKLGPGLNIPAATQ 339
++ V M F+ SG +S +K HD I L ++ L LG GLN P TQ
Sbjct: 282 DVAVNGTMATKFRCSGQTCVSANRIYVHEKIHDQYISKLAAAMKEKLVLGDGLN-PKTTQ 340
Query: 338 LVVCSPKA 315
+ + KA
Sbjct: 341 GPLVNQKA 348
>AF497830-1|AAM18108.1| 533|Caenorhabditis elegans putative Na-H
exchanger isoform 6 protein.
Length = 533
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 259 VAKFLQKELRNANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFWQ 438
+A+FLQ E +N + + + + AG+ FKG WI +SWN++
Sbjct: 454 IAEFLQVEKKNVHSKNMIEHIYTELIDTTMAGM-EDIAGFKG------HHWIRDSWNYFN 506
Query: 439 EIMMSPDSLNAGIM 480
+ P +N M
Sbjct: 507 NCYLRPVLVNKNNM 520
>AF098995-2|AAC67478.2| 538|Caenorhabditis elegans Na/h exchanger
protein 6, isoform a protein.
Length = 538
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 259 VAKFLQKELRNANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFWQ 438
+A+FLQ E +N + + + + AG+ FKG WI +SWN++
Sbjct: 454 IAEFLQVEKKNVHSKNMIEHIYTELIDTTMAGM-EDIAGFKG------HHWIRDSWNYFN 506
Query: 439 EIMMSPDSLNAGIM 480
+ P +N M
Sbjct: 507 NCYLRPVLVNKNNM 520
>AF098995-1|AAR30204.1| 634|Caenorhabditis elegans Na/h exchanger
protein 6, isoform b protein.
Length = 634
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +1
Query: 259 VAKFLQKELRNANVTIIADAFGEQTTSCVAAGIFRPGPSFKGPTKEITKKWIEESWNFWQ 438
+A+FLQ E +N + + + + AG+ FKG WI +SWN++
Sbjct: 454 IAEFLQVEKKNVHSKNMIEHIYTELIDTTMAGM-EDIAGFKG------HHWIRDSWNYFN 506
Query: 439 EIMMSPDSLNAGIM 480
+ P +N M
Sbjct: 507 NCYLRPVLVNKNNM 520
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,111,065
Number of Sequences: 27780
Number of extensions: 283677
Number of successful extensions: 705
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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