Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_O19
(591 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 151 3e-37
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 134 7e-32
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 120 1e-27
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 112 2e-25
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 112 2e-25
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 97 7e-21
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 82 3e-16
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 79 3e-15
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 76 2e-14
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 68 5e-12
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 68 6e-12
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 67 9e-12
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 64 6e-11
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 61 6e-10
07_01_0635 + 4753919-4754090,4754200-4754258,4754377-4754432,475... 60 2e-09
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 58 5e-09
01_05_0367 + 21427130-21427136,21427733-21427822,21427927-214281... 56 3e-08
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 55 4e-08
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 49 3e-06
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 44 9e-05
07_01_0246 + 1809762-1809803,1810383-1810557,1810678-1810763,181... 38 0.005
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 38 0.005
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 37 0.010
02_01_0126 + 924691-924839,925103-925220,925303-925389,925482-92... 35 0.042
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 33 0.13
02_01_0749 - 5568149-5568226,5568396-5568466,5568602-5568647,556... 33 0.17
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 32 0.30
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 32 0.30
09_02_0018 + 3016137-3016186,3016529-3016776,3018717-3018811,302... 31 0.69
05_01_0024 - 164618-165139,166884-166949,167046-167216,167321-16... 28 6.4
11_01_0766 - 6432455-6433342 27 8.5
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 151 bits (367), Expect = 3e-37
Identities = 67/115 (58%), Positives = 87/115 (75%)
Frame = +3
Query: 153 GNTTKKLQIGIKKRPSTCTIKSKKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQ 332
G+ T+ LQIG+K +P +CT+++ KGD + +HY G L DG+ FDSS RG P FTLG+GQ
Sbjct: 35 GDVTE-LQIGVKYKPESCTLQAHKGDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQ 93
Query: 333 VIKGWDQGLMGMCEGEQRKLVIPPELAYGEAGAPPKIPKSATLIFHVDLVKIERK 497
VIKGWDQGL+GMC GE+RKL IP ++ YGE G+PPKIP ATLIF +L+ + K
Sbjct: 94 VIKGWDQGLLGMCVGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELIAVNGK 148
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 134 bits (323), Expect = 7e-32
Identities = 58/99 (58%), Positives = 74/99 (74%)
Frame = +3
Query: 192 RPSTCTIKSKKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMC 371
+P +C+I++ KGD + +HY G L DGT+FDSS RG P+ F LG GQVIKGWDQG++GMC
Sbjct: 138 KPESCSIQAHKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMC 197
Query: 372 EGEQRKLVIPPELAYGEAGAPPKIPKSATLIFHVDLVKI 488
GE+RKL IP +L YG G+PP IP ATLIF +LV +
Sbjct: 198 VGEKRKLKIPSKLGYGAQGSPPTIPGGATLIFDTELVAV 236
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 120 bits (288), Expect = 1e-27
Identities = 53/90 (58%), Positives = 68/90 (75%)
Frame = +3
Query: 213 KSKKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKL 392
+ + GD + +HYTG L DGT+FDSS RGTP F+LG G+VIKGWD+G+ M +GEQ
Sbjct: 64 RPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWDEGIKTMKKGEQAVF 123
Query: 393 VIPPELAYGEAGAPPKIPKSATLIFHVDLV 482
+PPELAYGEAG+PP IP +ATL F V+L+
Sbjct: 124 TVPPELAYGEAGSPPAIPPNATLRFDVELL 153
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +3
Query: 225 GDLLHMHYTGILDDGTEFDSSVSRGT-PLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIP 401
G ++ + + G L+DGT F G P F QVI+G D+ ++ M +GE + +P
Sbjct: 301 GAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTDEEQVIEGLDRTVVTMKKGEVALVRLP 360
Query: 402 PELAYGEAGAPPK---IPKSATLIFHVDLVKIERKDE 503
P+ A+G +P ++T+ + V+LV E++ E
Sbjct: 361 PQHAFGSTETKQDLAVVPANSTVWYEVELVSFEKEKE 397
Score = 34.3 bits (75), Expect = 0.074
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +3
Query: 228 DLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPE 407
D + + Y L+DGT VS+ + F + G + + M +GE+ L + P+
Sbjct: 185 DEVLVKYEARLEDGTV----VSKSDGVEFAVKDGYFCPALSKAVKTMKKGEKVLLTVKPQ 240
Query: 408 LAYGEAGAPPK-----IPKSATLIFHVDLV 482
+GE G P +P +ATL ++L+
Sbjct: 241 YGFGEQGKPASGAEAAVPPNATLYVDLELL 270
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 112 bits (270), Expect = 2e-25
Identities = 52/86 (60%), Positives = 62/86 (72%)
Frame = +3
Query: 225 GDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPP 404
GD + +HYTG L DG +FDSS RGTP F LG GQVIKGWD G+ M +GE IPP
Sbjct: 64 GDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWDLGIKTMKKGENAVFTIPP 123
Query: 405 ELAYGEAGAPPKIPKSATLIFHVDLV 482
+LAYGE+G+PP IP SATL F V+L+
Sbjct: 124 DLAYGESGSPPTIPASATLQFDVELL 149
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Frame = +3
Query: 213 KSKKGDLLHMHYTGILDDGTEFDSSV-SRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRK 389
+ +G ++ + TG L DGT F P F +VI G D+ ++ M GE
Sbjct: 298 RPNEGAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEVIDGIDRAVLNMKNGEVAL 357
Query: 390 LVIPPELAYGEAGAPPK---IPKSATLIFHVDLVKIERKDE 503
+ IPPE A+G + +P ++T+I+ V+LV + E
Sbjct: 358 VTIPPEYAFGSTESKQDLAVVPPNSTVIYEVELVSFVKDKE 398
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +3
Query: 246 YTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYGEA 425
Y L+DGT +S+ FT+ G + + M + E+ L + P+ +GE
Sbjct: 192 YEARLEDGTV----ISKSEGAEFTVKDGFFCPALAKAVKTMKKAEKVLLTVKPQYGFGEN 247
Query: 426 GAPP-----KIPKSATLIFHVDLVKIERKDEL 506
G P +P +ATL+ +++LV + E+
Sbjct: 248 GRPAAGEEGAVPPNATLLVNLELVSWKTVTEI 279
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 112 bits (269), Expect = 2e-25
Identities = 53/89 (59%), Positives = 62/89 (69%)
Frame = +3
Query: 225 GDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPP 404
GD + +HYTG L DGT+FDSS R P FTLG GQVIKGWD G+ M +GE IPP
Sbjct: 102 GDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFTIPP 161
Query: 405 ELAYGEAGAPPKIPKSATLIFHVDLVKIE 491
ELAYGE G+PP IP +ATL F V+L+ E
Sbjct: 162 ELAYGEDGSPPVIPPNATLQFDVELISWE 190
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Frame = +3
Query: 189 KRPSTCTIKSKKGDLLHMHYTGILDDGTEFDSSVSRGT-PLTFTLGHGQVIKGWDQGLMG 365
+RPS CT L+ + G L+DGT F + G P F QV++G D+ ++
Sbjct: 346 ERPSDCT-------LVRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEGLDKAVLS 398
Query: 366 MCEGEQRKLVIPPELAYGEAGAPPK---IPKSATLIFHVDLVKIERKDE 503
M +GE + IPPE A+G +P ++T+ + V+LV +++ E
Sbjct: 399 MKKGEVALVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVELVSFDKEKE 447
Score = 30.7 bits (66), Expect = 0.91
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 11/92 (11%)
Frame = +3
Query: 264 DGTEFDSSVSRGTPLT-FTLGHGQVIKGW-----DQGLMGMCEGEQRKLVIPPELAYGEA 425
DG EF +V GT L+ F + +V+KG + + M + E+ L + P+ +GE
Sbjct: 239 DGVEF--TVKDGTILSIFEHLYYKVLKGHFCPAISKAVKTMKKNEKALLTVKPQYGFGEQ 296
Query: 426 GAP-----PKIPKSATLIFHVDLVKIERKDEL 506
G P IP +ATL +++LV + E+
Sbjct: 297 GRPAARDEAAIPPNATLHINLELVSWKAVTEI 328
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 97.5 bits (232), Expect = 7e-21
Identities = 52/111 (46%), Positives = 71/111 (63%), Gaps = 14/111 (12%)
Frame = +3
Query: 216 SKKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMG------MCEG 377
+++G L+ HYTG L+DGT FDSS RG PLTF +G G+VIKGWDQG++G M G
Sbjct: 111 AEQGQLIKAHYTGRLEDGTVFDSSYKRGKPLTFRVGVGEVIKGWDQGIVGGEGIPPMLAG 170
Query: 378 EQRKLVIPPELAYGEAGAPPK--------IPKSATLIFHVDLVKIERKDEL 506
+R L +PPELAYG GA + IP ++TL+F V++ ++ EL
Sbjct: 171 GKRSLRLPPELAYGARGAGCRGWEPTSCVIPPNSTLLFDVEMFRVYIDTEL 221
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 82.2 bits (194), Expect = 3e-16
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = +3
Query: 213 KSKKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKL 392
K+ G + + Y G L +GT FDS+V R F LG G+VIKGWD G+ GM G++R+L
Sbjct: 505 KASPGKKVSVKYIGKLKNGTIFDSTVGRRA-FDFRLGIGEVIKGWDIGINGMRVGDKRRL 563
Query: 393 VIPPELAYGEAGAPPKIPKSATLIFHVDLV 482
IPP + YG P IP+++TL+F V+LV
Sbjct: 564 TIPPSMGYGNKRMGP-IPQNSTLVFDVELV 592
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 79.0 bits (186), Expect = 3e-15
Identities = 36/91 (39%), Positives = 59/91 (64%)
Frame = +3
Query: 216 SKKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLV 395
+ G + + Y G L DG +S+V P F LG G+VI+GWD G+ GM G++RKL
Sbjct: 307 ASNGSKVSIKYVGTLQDGKIVESNVGE-KPYKFKLGAGKVIRGWDVGICGMRVGDKRKLT 365
Query: 396 IPPELAYGEAGAPPKIPKSATLIFHVDLVKI 488
+PP + YG + A ++PK++++I+ ++LVK+
Sbjct: 366 VPPAMCYG-SKAIGEVPKNSSIIYEIELVKV 395
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 75.8 bits (178), Expect = 2e-14
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Frame = +3
Query: 207 TIKSKKGDLLHMHYTGIL-DDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQ 383
+IK+ L +HY G L ++G FD++ + +F +G G VIK WD + M GE
Sbjct: 115 SIKASASTLSTVHYEGTLAENGEVFDTTHEDNSVFSFEIGEGTVIKAWDIAVKTMKVGEV 174
Query: 384 RKLVIPPELAYGEAGAPPKIP---KSATLIFHVDLV 482
K+ PE AYG AG+PP+IP +SATL F V+L+
Sbjct: 175 AKITCKPEYAYGAAGSPPEIPPEVQSATLTFEVELI 210
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Frame = +3
Query: 222 KGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMG------MCEGEQ 383
+G L+++HYT DG FDS+ RG PLT LG G++++G +QG+ G M G +
Sbjct: 129 RGQLINVHYTARFTDGIVFDSTYKRGRPLTMRLGAGKILRGLEQGISGGGGVPPMLVGGK 188
Query: 384 RKLVIPPELAYG 419
RKL+IP LAYG
Sbjct: 189 RKLMIPATLAYG 200
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 231 LLHMHYTGIL-DDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPE 407
L+ +HY G L ++G FD++ + +F +G G VIK WD L M GE K+ PE
Sbjct: 34 LVDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVAKITCKPE 93
Query: 408 LAYGEAGAPPKIPKSATLI 464
AYG AG+PP+IP + I
Sbjct: 94 YAYGSAGSPPEIPPKSVAI 112
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 67.3 bits (157), Expect = 9e-12
Identities = 36/91 (39%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +3
Query: 243 HYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAY-- 416
+Y ++ +G FDSS+ +G P F +G GQVIKG D+G++ M G R+L IP LA+
Sbjct: 170 NYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLYIPGPLAFPK 229
Query: 417 GEAGAP--PKIPKSATLIFHVDLVKIERKDE 503
G AP P++ S+ ++F V+L+ I D+
Sbjct: 230 GLTSAPGRPRVAPSSPVMFDVNLLYIPGLDD 260
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 64.5 bits (150), Expect = 6e-11
Identities = 35/89 (39%), Positives = 51/89 (57%)
Frame = +3
Query: 225 GDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPP 404
G +++ Y +L +G D + T F LG G+VI GWD G+ GM G R+L IPP
Sbjct: 271 GKKVYVKYVCMLSNGDTVDPTGESST-CKFKLGAGEVISGWDLGIDGMRVGGIRRLGIPP 329
Query: 405 ELAYGEAGAPPKIPKSATLIFHVDLVKIE 491
L YG+ G IP +A L F ++L+K++
Sbjct: 330 HLGYGDVGR-GNIPPNAWLNFDIELLKVK 357
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 61.3 bits (142), Expect = 6e-10
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Frame = +3
Query: 213 KSKKGDLLHMHYTGILDDGT---EFDSSVSRGT-PLTFTLGHGQVIKGWDQGLMGMCEGE 380
K KG + +H TG D +F S+ G P +F +G G VIKGWD+G+M M GE
Sbjct: 15 KPVKGQKVTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVIKGWDEGVMTMQVGE 74
Query: 381 QRKLVIPPELAYGEAGAPP-KIPKSATLIFHVDLVKIE 491
++ P+ AYG +G P I ++ L+F ++++ +
Sbjct: 75 VARIQCTPDYAYGASGFPAWGIRPNSVLVFEIEVLSAQ 112
>07_01_0635 +
4753919-4754090,4754200-4754258,4754377-4754432,
4754698-4754842,4755506-4755580,4755844-4755933,
4756218-4756295,4757879-4758376,4758512-4758997
Length = 552
Score = 59.7 bits (138), Expect = 2e-09
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 7/91 (7%)
Frame = +3
Query: 210 IKSKKGDLLHMHYT----GILDDGTEFDSSVSRGTPLTFTLGH---GQVIKGWDQGLMGM 368
+K+ KG + +HY GI + V GTP F +G+ G V+KG D G+ GM
Sbjct: 135 LKAVKGSRVAVHYVAKWKGITFMTSRQGLGVGGGTPYGFDIGNSERGNVLKGLDLGVEGM 194
Query: 369 CEGEQRKLVIPPELAYGEAGAPPKIPKSATL 461
G QR +++PPELAYG+ G +IP +AT+
Sbjct: 195 KVGGQRLIIVPPELAYGKKGV-QEIPPNATI 224
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 58.0 bits (134), Expect = 5e-09
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Frame = +3
Query: 240 MHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYG 419
+H+TG DGT F S+ G PLTF LG V++G+ + M GE+ IPPELA
Sbjct: 68 VHFTGKRLDGTWFASTREDGVPLTFILGQENVMRGFSMAVSSMQAGEKAVFTIPPELAGT 127
Query: 420 EAGAPPKIP----KSATLIFHVDLVKI 488
++ P IP + L F ++L+ +
Sbjct: 128 KSRCPVDIPGNIAPNEALRFDIELISL 154
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Frame = +3
Query: 240 MHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYG 419
++Y L+DG SVS + F L G + + + M EGE+ L++ PE +G
Sbjct: 188 VNYNACLEDGM----SVSMSEGIEFNLAEGFFCPAFARAVETMTEGEEAVLIVKPEYGFG 243
Query: 420 EAGAP-----PKIPKSATLIFHVDLV 482
E G P +P ATL ++ L+
Sbjct: 244 ERGRPSIGDEAGVPPDATLYVYLQLM 269
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 252 GILDDGTEFDSSVSRGT-PLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYGEAG 428
G L DG FD G P F + QV +G ++ ++ M EGE IPP +
Sbjct: 310 GKLQDGAVFDQRGHEGDEPFKFMVDEEQVSEGLEEAVLTMREGEVSLFTIPPHRVQDQLL 369
Query: 429 APPKIPKSATLIFHVDLVKI 488
+P +++ + ++LV +
Sbjct: 370 V---VPVGSSVTYEIELVSV 386
>01_05_0367 +
21427130-21427136,21427733-21427822,21427927-21428105,
21429115-21429432,21430537-21430563
Length = 206
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Frame = +3
Query: 252 GILDDGTEFDS-SVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYGEAG 428
G L DGT FD P F + GQVI G D+ +M M EGE + IPP+ A+ G
Sbjct: 7 GKLQDGTVFDRRGYGDDEPFEFVVDEGQVIDGLDESVMTMEEGEVAEFTIPPQHAFDAVG 66
Query: 429 APPK----IPKSATLIFHVDLVKI 488
+ +P++AT+++ ++L+ +
Sbjct: 67 SDQHQFAFVPRNATVVYKIELLSV 90
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Frame = +3
Query: 240 MHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYG 419
+H+TG L DGT+F SS P F LG V+ G++ + M GE+ IP L
Sbjct: 15 VHFTGELVDGTQFVSSRENDIPERFILGQEDVMHGFNLAVSSMQPGEKAIFTIPSALTMT 74
Query: 420 EAGAPPKIPK----SATLIFHVDLV 482
+AG+P IP + TL F ++L+
Sbjct: 75 KAGSPASIPSNIPPNQTLRFEIELI 99
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Frame = +3
Query: 213 KSKKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKL 392
+S D + + Y L DGT SVS+ + F+L G + + M EGE+ L
Sbjct: 127 QSHSSDFVFVKYDACLMDGT----SVSKSEGVEFSLTDGFFCPAFAHAVHTMKEGEEAVL 182
Query: 393 VIPPELAYGEAGAPPK-----IPKSATLIFHV 473
++ P+ A+GE G P + +P ATL H+
Sbjct: 183 IVKPKYAFGEQGRPSQGEEAAVPPDATLYVHL 214
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 48.8 bits (111), Expect = 3e-06
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Frame = +3
Query: 45 AFLCISFIIMNPTPITVCKVLLFIIVFMNVISHVVIGNTTKKLQI-GIKKRPSTCTIKSK 221
A+L S +I I + + ++ F+ V + G K+ + G + P C +
Sbjct: 270 AYLTNSSLIPQLEGIEEVQFEVELVQFVQVRDMLGDGRLIKRRVVDGKGEFPMDCPLHDS 329
Query: 222 KGDLLHMHYTGILDDGTE---FDSSV-SRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRK 389
LL +HY G+L D + +D+ V + G PL F G G V +G++ + M GE+
Sbjct: 330 ---LLRVHYKGMLLDEPKSIFYDTRVDNHGEPLEFCSGEGLVPEGFEMCVRLMLPGEKSI 386
Query: 390 LVIPPELAYGE-AGAPPKIPKSATLIFHVDLVKIE 491
+ PP+ AY + P +P+ A + + ++L+ E
Sbjct: 387 VTCPPDFAYDKFPRLPANVPEGAHVQWEIELLGFE 421
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +3
Query: 360 MGMCEGEQRKLVIPPELAYGEAGAPPKIPKSATLIFHVDLVKIER 494
+GM G +R+L IPP YG+ A PKIP ++ L++ V+L++++R
Sbjct: 483 LGMRVGGKRRLTIPPAQGYGDV-ATPKIPANSWLVYEVELLEVKR 526
>07_01_0246 +
1809762-1809803,1810383-1810557,1810678-1810763,
1810871-1810921,1811003-1811146,1811299-1811343,
1811578-1811633,1811744-1811819,1811908-1812006
Length = 257
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 312 FTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYGEAGAPPKIPKSAT 458
F +G GQVI +++ + M G R++++PP+L Y + PK T
Sbjct: 175 FKIGSGQVIPAFEEAISDMAPGGVRRIIVPPDLGYPDNDYNKLGPKPTT 223
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +3
Query: 252 GILDDGTEFDSSVSRGT-PLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYGEAG 428
G L DG FD +G P F + QV G ++ ++ M EGE IPP+ +
Sbjct: 206 GKLHDGAVFDQRGHQGDEPFEFVVDEEQVSDGLEEAVLTMWEGEVSLFTIPPQCLQDQHV 265
Query: 429 APPKIPKSATLIFHVDLVKI 488
+P +++ + ++LV +
Sbjct: 266 V---VPPGSSVTYEIELVSV 282
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Frame = +3
Query: 228 DLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPE 407
D + ++Y L+DG SVS + F L G + + + M EGE+ L++ E
Sbjct: 80 DEVLVNYNACLEDGM----SVSMSEGVEFNLAEGFFCPAFARAVETMTEGEEVVLIVKLE 135
Query: 408 LAYGEAGAP-----PKIPKSATLIFHVDLV 482
+GE G P +P ATL ++ L+
Sbjct: 136 YGFGERGRPSIGDEAAVPPDATLYVYLQLM 165
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 37.1 bits (82), Expect = 0.010
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Frame = +3
Query: 183 IKKRPSTCTIKSKKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLM 362
I KRP S D + ++Y L+DG +SVS+ L L +K +
Sbjct: 61 IIKRPLPDKSPSNHADTVIVNYNACLEDG----NSVSKSERLELNLASRTALK---YAVK 113
Query: 363 GMCEGEQRKLVIPPELAYG-----EAGAPPKIPKSATLIFHVDLVKIERK 497
M EGE+ ++ P A+G G +P ATL +V L ERK
Sbjct: 114 TMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQLA--ERK 161
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +3
Query: 366 MCEGEQRKLVIPPELAYGEAGAPPKIPKS----ATLIFHVDLVKI 488
M GE+ IPP+LA ++G+P IP S TL F ++L+ +
Sbjct: 1 MRPGERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISL 45
>02_01_0126 +
924691-924839,925103-925220,925303-925389,925482-925631,
925750-925809,925914-925976
Length = 208
Score = 35.1 bits (77), Expect = 0.042
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +3
Query: 363 GMCEGEQRKLVIPPELAYGEAGAPPKIPKSATLIFHVDLVKI 488
GM G +R++++PPEL YG+ G +IP A ++L+++
Sbjct: 162 GMKVGGKRRVIVPPELGYGKKGM-NEIPPDAPFELDIELLEV 202
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 33.5 bits (73), Expect = 0.13
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Frame = +3
Query: 213 KSKKGDLLHMHYTGILDDGT-EFDSSVSRGTPLTFTLG-HGQVIKGWDQGLMGMCEGEQR 386
K K +HY + +F+ + P+ +G + + G G+ M GE+
Sbjct: 75 KPSKFATCFLHYRAWVQGSLHKFEDTWQEQHPIELVIGKEKKQMSGLGIGVGNMRSGERA 134
Query: 387 KLVIPPELAYGEAG--APPKIPKSATLIFHVDLV 482
L + EL YG+ G + P +P A L++ V+L+
Sbjct: 135 LLHVGWELGYGKEGSFSFPNVPPMADLLYEVELI 168
>02_01_0749 -
5568149-5568226,5568396-5568466,5568602-5568647,
5568800-5568843,5569267-5569301,5569414-5569520
Length = 126
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +3
Query: 258 LDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVIPPELAYGEAGAPP 437
LD G + ++++ P T ++I+G ++GM G +R+ +IPP++ Y + P
Sbjct: 40 LDSGVKLEAALC--DPARLTSLAARMIRGLKDVIVGMKTGGKRRALIPPQVGYTDESLQP 97
Query: 438 KIPK 449
IP+
Sbjct: 98 -IPE 100
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = +3
Query: 240 MHYTGILDDGT-EFDSSVSRGTPLTFTLG-HGQVIKGWDQGLMGMCEGEQRKLVIPPELA 413
+HY + + +F+ + + LG + + G G+ M GE+ L + EL
Sbjct: 79 VHYRAWVQGSSHKFEDTWQEQHSIELVLGKEKKEMTGLGIGVSNMRSGERALLHVNWELG 138
Query: 414 YGEAG--APPKIPKSATLIFHVDLVKIERKDEL 506
YG+ G + P +P A L++ V+L+ + E+
Sbjct: 139 YGKEGSFSFPNVPPMADLVYEVELIGFDDVKEV 171
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 32.3 bits (70), Expect = 0.30
Identities = 26/91 (28%), Positives = 43/91 (47%)
Frame = +3
Query: 219 KKGDLLHMHYTGILDDGTEFDSSVSRGTPLTFTLGHGQVIKGWDQGLMGMCEGEQRKLVI 398
K G + HY G + G DS+ I+G+++G+ M G +R+++I
Sbjct: 78 KDGQQVIFHYVGYNESGRRIDSTY---------------IQGFEEGIRDMKPGGKRRIII 122
Query: 399 PPELAYGEAGAPPKIPKSATLIFHVDLVKIE 491
PPEL G P + K+ L+ ++KIE
Sbjct: 123 PPEL-----GPPDTVGKA--LLKISSIIKIE 146
>09_02_0018 +
3016137-3016186,3016529-3016776,3018717-3018811,
3020025-3020330,3021288-3021336,3021436-3021637,
3023364-3023532,3023605-3023634,3023742-3023807,
3025313-3025378,3029404-3029464,3029592-3029719,
3030716-3030757,3031074-3031190,3031280-3031339
Length = 562
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 142 WDITFMNTIINKRTLQTVIGVGFIIMKLIHRNA 44
W ITF+ T+I + ++GVGF + +IH +A
Sbjct: 524 WAITFITTLIFGIEIGVLVGVGFSLAFVIHESA 556
>05_01_0024 -
164618-165139,166884-166949,167046-167216,167321-167422,
167538-167600,167679-167825,168234-168359,168742-168921,
169183-169322,169688-169861,170096-170123
Length = 572
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 258 LDDGTEFDSSVSRGTPLTFTLGHGQ 332
L G + +S GTPL + GHGQ
Sbjct: 77 LSKGVDVESESDAGTPLIWAAGHGQ 101
>11_01_0766 - 6432455-6433342
Length = 295
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 434 TKNPKVCNTHFPCGSCKN*KKR*IVN-FVSL 523
T+ P +CNT GSC KKR +V FV L
Sbjct: 164 TRRPPLCNTCCQDGSCTEEKKRNVVALFVQL 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,881,475
Number of Sequences: 37544
Number of extensions: 340958
Number of successful extensions: 801
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -