Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_O11
(391 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical ... 49 1e-06
Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical pr... 28 2.7
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 3.6
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 27 3.6
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 27 3.6
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 27 3.6
AC024857-2|AAK31567.2| 463|Caenorhabditis elegans Hypothetical ... 27 3.6
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 27 6.2
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 26 8.2
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 26 8.2
AF067220-2|AAC16978.1| 588|Caenorhabditis elegans Hypothetical ... 26 8.2
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 26 8.2
>AC006644-6|AAZ91358.1| 958|Caenorhabditis elegans Hypothetical
protein F55A3.1 protein.
Length = 958
Score = 49.2 bits (112), Expect = 1e-06
Identities = 20/73 (27%), Positives = 39/73 (53%)
Frame = +2
Query: 155 EQSPVLFVWQDWALGVLYTKIVCALTMIGPDWSMRKAIEKGYRDGIREMDLKLILREVAA 334
+Q+ ++F +QDWA+GV+ KI + ++GPDW ++ ++ + GI + +
Sbjct: 875 QQTALMFPYQDWAMGVVQIKIFGVIAVMGPDWWLKTELDLLVQRGIENFAALHVFVRIVV 934
Query: 335 PIVCLLGLALAVP 373
P + L +A P
Sbjct: 935 PCILYLSTFIAFP 947
>Z83104-1|CAB54204.1| 573|Caenorhabditis elegans Hypothetical
protein F09B12.1a protein.
Length = 573
Score = 27.9 bits (59), Expect = 2.7
Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = -3
Query: 272 SRWPYAYSSPGQSL*AHTLSSC---KVHRGPSPAIRTALAIVPAGREVESLIPARGVS 108
S+ Y Y +P Q A T C + GP PA A + AG+ I +G S
Sbjct: 21 SQRSYQYGAPTQQFAACTPQCCGCSQAQPGPQPAAAAAARVAAAGKTPTEPISVQGSS 78
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 376 VRHRQRKPQQAHDRRRHLA 320
V H QR PQQ+H HLA
Sbjct: 416 VSHHQRSPQQSHPAAPHLA 434
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 376 VRHRQRKPQQAHDRRRHLA 320
V H QR PQQ+H HLA
Sbjct: 431 VSHHQRSPQQSHPAAPHLA 449
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 376 VRHRQRKPQQAHDRRRHLA 320
V H QR PQQ+H HLA
Sbjct: 431 VSHHQRSPQQSHPAAPHLA 449
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 376 VRHRQRKPQQAHDRRRHLA 320
V H QR PQQ+H HLA
Sbjct: 63 VSHHQRSPQQSHPAAPHLA 81
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 376 VRHRQRKPQQAHDRRRHLA 320
V H QR PQQ+H HLA
Sbjct: 136 VSHHQRSPQQSHPAAPHLA 154
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.5 bits (58), Expect = 3.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -1
Query: 376 VRHRQRKPQQAHDRRRHLA 320
V H QR PQQ+H HLA
Sbjct: 431 VSHHQRSPQQSHPAAPHLA 449
>AC024857-2|AAK31567.2| 463|Caenorhabditis elegans Hypothetical
protein Y71G12A.4 protein.
Length = 463
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -1
Query: 343 HDRRRHLAQNKLKVHLSDTVPVALLDGLTHTPVRANHCERTHYLRVKYTEGPVLPYEQHW 164
H + ++ ++ V L DT+P L L H + CER + RV+ G + ++W
Sbjct: 356 HGEKDYIVGHEHGVLLKDTIPDCELHLLQHASHQGIFCEREMWDRVEAFLGSRVGITRNW 415
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 26.6 bits (56), Expect = 6.2
Identities = 12/50 (24%), Positives = 18/50 (36%)
Frame = -2
Query: 159 CSSGTRSGITNTSSRSKPXMSGIRPXXXXXXXXXXXXXXAHTPTRVASAP 10
C+S T T+T + +KP + P TPT + P
Sbjct: 245 CASTTTVSTTSTVTTTKPTTTTTTPTTTTTTPTTTTTTPTTTPTTTTTTP 294
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 290 YRPGSPSRWPYAYSSPGQSL*AHTLSSCKVHRGPSPAIRTALAI 159
+RPGS + YA + G T + H PSP T L +
Sbjct: 975 HRPGSEHHYHYAQLTGGPGNAMSTFYGNQYHDDPSPYATTTLVL 1018
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 290 YRPGSPSRWPYAYSSPGQSL*AHTLSSCKVHRGPSPAIRTALAI 159
+RPGS + YA + G T + H PSP T L +
Sbjct: 975 HRPGSEHHYHYAQLTGGPGNAMSTFYGNQYHDDPSPYATTTLVL 1018
>AF067220-2|AAC16978.1| 588|Caenorhabditis elegans Hypothetical
protein C33E10.5 protein.
Length = 588
Score = 26.2 bits (55), Expect = 8.2
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -1
Query: 256 HTPVRANHCERTHYLRVKYTEGPVLPYEQHWRLFQ 152
HT CER + E P +E WR F+
Sbjct: 156 HTDFTEKECERDNLAGTTPNEQPTTSHEMPWRSFE 190
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = -3
Query: 290 YRPGSPSRWPYAYSSPGQSL*AHTLSSCKVHRGPSPAIRTALAI 159
+RPGS + YA + G T + H PSP T L +
Sbjct: 975 HRPGSEHHYHYAQLTGGPGNAMSTFYGNQYHDDPSPYATTTLVL 1018
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,056,599
Number of Sequences: 27780
Number of extensions: 151550
Number of successful extensions: 530
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 529
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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