Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_O05
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p pro... 217 8e-57
AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA... 217 8e-57
AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-P... 31 1.4
DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.8
DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.8
DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.8
DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.8
DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.8
DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.8
DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.8
DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1 ... 31 1.8
BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p pro... 31 1.8
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 31 1.8
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 31 1.8
AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB... 31 1.8
AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC... 31 1.8
AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA... 31 1.8
AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute pr... 31 1.8
AY069638-1|AAL39783.1| 231|Drosophila melanogaster LD40504p pro... 29 5.5
AE014297-3707|AAF56390.1| 231|Drosophila melanogaster CG11820-P... 29 5.5
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 28 9.6
>AY070827-1|AAL48449.1| 135|Drosophila melanogaster AT27980p
protein.
Length = 135
Score = 217 bits (531), Expect = 8e-57
Identities = 98/135 (72%), Positives = 114/135 (84%), Gaps = 1/135 (0%)
Frame = +1
Query: 190 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 369
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYPRKV K+MGKN
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 370 KIHKRSKIKPFVKGVNYNHLMPTRYSV-DFSFEKFCAKDLKDPAKRKKLRFNSRVRFEER 546
K+ K+SK+KPF+K +NYNHLMPTRY+ D SFEK KDLKDP KRK RF +RV+FE
Sbjct: 61 KLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFESV 120
Query: 547 YKSGKNKWFFQKLRF 591
YK GKNKWFFQKLRF
Sbjct: 121 YKEGKNKWFFQKLRF 135
>AE014297-3837|AAF56495.1| 135|Drosophila melanogaster CG4759-PA
protein.
Length = 135
Score = 217 bits (531), Expect = 8e-57
Identities = 98/135 (72%), Positives = 114/135 (84%), Gaps = 1/135 (0%)
Frame = +1
Query: 190 MGKIMKPGKVVLVLSGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKN 369
M KIMK GK+V+VLSGRYAGRKAI+VK +D+GT +KP+GHA VAGIDRYPRKV K+MGKN
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRYPRKVTKKMGKN 60
Query: 370 KIHKRSKIKPFVKGVNYNHLMPTRYSV-DFSFEKFCAKDLKDPAKRKKLRFNSRVRFEER 546
K+ K+SK+KPF+K +NYNHLMPTRY+ D SFEK KDLKDP KRK RF +RV+FE
Sbjct: 61 KLKKKSKVKPFLKSLNYNHLMPTRYTAHDISFEKLSPKDLKDPVKRKTHRFQTRVKFESV 120
Query: 547 YKSGKNKWFFQKLRF 591
YK GKNKWFFQKLRF
Sbjct: 121 YKEGKNKWFFQKLRF 135
>AE013599-1694|AAF58382.1| 506|Drosophila melanogaster CG17050-PA
protein.
Length = 506
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 433 PTRYSVDFSFEKFCAKDLKDPAKRKKLRF 519
P Y +F FE+F KDL+ AK K L+F
Sbjct: 60 PKPYVKEFEFERFHLKDLRSDAKFKHLQF 88
>DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 58 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 115
>BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p
protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -1
Query: 533 RTLELKRSFLRLAGSFRSFAQNFSKL 456
RTL+ RSFL L+G +R F N++KL
Sbjct: 425 RTLKELRSFLGLSGYYRRFIPNYAKL 450
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -1
Query: 533 RTLELKRSFLRLAGSFRSFAQNFSKL 456
RTL+ RSFL L+G +R F N++KL
Sbjct: 269 RTLKELRSFLGLSGYYRRFIPNYAKL 294
>AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB,
isoform B protein.
Length = 950
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 111 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 168
>AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC,
isoform C protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA,
isoform A protein.
Length = 984
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 145 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 202
>AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute
protein protein.
Length = 950
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +1
Query: 247 GRKAIVVKNYDEGTSDKPYGHAFVAGI--DRYPRKVHKRMGKNKIHKRSKIKPFVKGV 414
GR ++ N+ + T + Y H + I D+ PRKV++ + + +H SKI +K V
Sbjct: 111 GRPIVLRANHFQVTMPRGYVHHYDINIQPDKCPRKVNREIIETMVHAYSKIFGVLKPV 168
>AY069638-1|AAL39783.1| 231|Drosophila melanogaster LD40504p
protein.
Length = 231
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Frame = +1
Query: 259 IVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPT 438
I+ +NYD+ PY + + R V ++ ++I +R + G L P
Sbjct: 33 IIAENYDDDDKSGPYPYKEDTSPEPKRRSVEEKFWSHRIKERIGVNESYHGYK---LCPN 89
Query: 439 RYSVD-----FSFEKFCAKDLKDPAKRKKLRFNSRVR 534
+Y++ + KF + L P+ R R+ +R
Sbjct: 90 KYNIYHKCSLYCVNKFNSSPLSQPSHRYLKRYKRLLR 126
>AE014297-3707|AAF56390.1| 231|Drosophila melanogaster CG11820-PA
protein.
Length = 231
Score = 29.1 bits (62), Expect = 5.5
Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Frame = +1
Query: 259 IVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPT 438
I+ +NYD+ PY + + R V ++ ++I +R + G L P
Sbjct: 33 IIAENYDDDDKSGPYPYKEDTSPEPKRRSVEEKFWSHRIKERIGVNESYHGYK---LCPN 89
Query: 439 RYSVD-----FSFEKFCAKDLKDPAKRKKLRFNSRVR 534
+Y++ + KF + L P+ R R+ +R
Sbjct: 90 KYNIYHKCSLYCVNKFNSSPLSQPSHRYLKRYKRLLR 126
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1
Query: 536 KRTLELKRSFLRLAGSFRSFAQNFSKL 456
K T E+K SFL L G +R F NF+K+
Sbjct: 425 KSTKEIK-SFLGLCGFYRKFIPNFAKI 450
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,191,168
Number of Sequences: 53049
Number of extensions: 583872
Number of successful extensions: 1346
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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