SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_O03
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457261-1|CAG33542.1|  826|Homo sapiens ELAC2 protein.               168   1e-41
BC004158-1|AAH04158.1|  826|Homo sapiens elaC homolog 2 (E. coli...   168   1e-41
BC001939-1|AAH01939.1|  826|Homo sapiens elaC homolog 2 (E. coli...   168   1e-41
AK124838-1|BAC85964.1|  454|Homo sapiens protein ( Homo sapiens ...   168   1e-41
AF304370-1|AAG24441.1|  826|Homo sapiens putative prostate cance...   168   1e-41
AK001392-1|BAA91666.1|  854|Homo sapiens protein ( Homo sapiens ...   167   2e-41
AK125030-1|BAC86026.1|  501|Homo sapiens protein ( Homo sapiens ...    70   6e-12
AF304369-1|AAG24440.1|   46|Homo sapiens putative prostate cance...    66   1e-10
BC014624-1|AAH14624.1|  363|Homo sapiens elaC homolog 1 (E. coli...    40   0.007
AK223507-1|BAD97227.1|  363|Homo sapiens elaC homolog 1 variant ...    40   0.007
AK024822-1|BAB15021.1|  363|Homo sapiens protein ( Homo sapiens ...    40   0.007
AF308695-1|AAG24917.1|  363|Homo sapiens ELAC1 protein.                40   0.007
AB029151-1|BAA96799.1|  363|Homo sapiens D29 protein.                  40   0.007
AY463963-1|AAR25628.1|  267|Homo sapiens Down syndrome critical ...    30   5.4  

>CR457261-1|CAG33542.1|  826|Homo sapiens ELAC2 protein.
          Length = 826

 Score =  168 bits (409), Expect = 1e-41
 Identities = 86/198 (43%), Positives = 123/198 (62%)
 Frame = +1

Query: 10   AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
            A ++ +  + S+LLDCGEGTFGQL R YG + V+  L TL A+++SHLHADHH GL  +L
Sbjct: 501  ATLVNISPDTSLLLDCGEGTFGQLCRHYGDQ-VDRVLGTLAAVFVSHLHADHHTGLPSIL 559

Query: 190  QARRLALEELSPPGNPEPCYLLAPGQIVTWLNMYDHQFERIKADFTLIPNQNLLYNGGSS 369
              R  AL  L  P +P    ++AP Q+  WL  Y +Q + +    ++IP + L       
Sbjct: 560  LQRERALASLGKPLHP--LLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCL-----QE 612

Query: 370  KTDVTSPVTAKAEMTSAVLAAIGLQQIDTCLVSHCPNAFGVALELDKGQKITYSGDTLPC 549
              +++SP   +  + S++L    L++  TCLV HC +AFG AL    G K+ YSGDT+PC
Sbjct: 613  GAEISSPAVER--LISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPC 670

Query: 550  EELVKIGVNSTLLIHEAT 603
            E LV++G ++TLLIHEAT
Sbjct: 671  EALVRMGKDATLLIHEAT 688


>BC004158-1|AAH04158.1|  826|Homo sapiens elaC homolog 2 (E. coli)
            protein.
          Length = 826

 Score =  168 bits (409), Expect = 1e-41
 Identities = 86/198 (43%), Positives = 123/198 (62%)
 Frame = +1

Query: 10   AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
            A ++ +  + S+LLDCGEGTFGQL R YG + V+  L TL A+++SHLHADHH GL  +L
Sbjct: 501  ATLVNISPDTSLLLDCGEGTFGQLCRHYGDQ-VDRVLGTLAAVFVSHLHADHHTGLPSIL 559

Query: 190  QARRLALEELSPPGNPEPCYLLAPGQIVTWLNMYDHQFERIKADFTLIPNQNLLYNGGSS 369
              R  AL  L  P +P    ++AP Q+  WL  Y +Q + +    ++IP + L       
Sbjct: 560  LQRERALASLGKPLHP--LLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCL-----QE 612

Query: 370  KTDVTSPVTAKAEMTSAVLAAIGLQQIDTCLVSHCPNAFGVALELDKGQKITYSGDTLPC 549
              +++SP   +  + S++L    L++  TCLV HC +AFG AL    G K+ YSGDT+PC
Sbjct: 613  GAEISSPAVER--LISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPC 670

Query: 550  EELVKIGVNSTLLIHEAT 603
            E LV++G ++TLLIHEAT
Sbjct: 671  EALVRMGKDATLLIHEAT 688


>BC001939-1|AAH01939.1|  826|Homo sapiens elaC homolog 2 (E. coli)
            protein.
          Length = 826

 Score =  168 bits (409), Expect = 1e-41
 Identities = 86/198 (43%), Positives = 123/198 (62%)
 Frame = +1

Query: 10   AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
            A ++ +  + S+LLDCGEGTFGQL R YG + V+  L TL A+++SHLHADHH GL  +L
Sbjct: 501  ATLVNISPDTSLLLDCGEGTFGQLCRHYGDQ-VDRVLGTLAAVFVSHLHADHHTGLPSIL 559

Query: 190  QARRLALEELSPPGNPEPCYLLAPGQIVTWLNMYDHQFERIKADFTLIPNQNLLYNGGSS 369
              R  AL  L  P +P    ++AP Q+  WL  Y +Q + +    ++IP + L       
Sbjct: 560  LQRERALASLGKPLHP--LLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCL-----QE 612

Query: 370  KTDVTSPVTAKAEMTSAVLAAIGLQQIDTCLVSHCPNAFGVALELDKGQKITYSGDTLPC 549
              +++SP   +  + S++L    L++  TCLV HC +AFG AL    G K+ YSGDT+PC
Sbjct: 613  GAEISSPAVER--LISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPC 670

Query: 550  EELVKIGVNSTLLIHEAT 603
            E LV++G ++TLLIHEAT
Sbjct: 671  EALVRMGKDATLLIHEAT 688


>AK124838-1|BAC85964.1|  454|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42848 fis, clone BRHIP2004359, weakly  similar
           to ELAC PROTEIN. ).
          Length = 454

 Score =  168 bits (409), Expect = 1e-41
 Identities = 86/198 (43%), Positives = 123/198 (62%)
 Frame = +1

Query: 10  AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
           A ++ +  + S+LLDCGEGTFGQL R YG + V+  L TL A+++SHLHADHH GL  +L
Sbjct: 129 ATLVNISPDTSLLLDCGEGTFGQLCRHYGDQ-VDRVLGTLAAVFVSHLHADHHTGLPSIL 187

Query: 190 QARRLALEELSPPGNPEPCYLLAPGQIVTWLNMYDHQFERIKADFTLIPNQNLLYNGGSS 369
             R  AL  L  P +P    ++AP Q+  WL  Y +Q + +    ++IP + L       
Sbjct: 188 LQRERALASLGKPLHP--LLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCL-----QE 240

Query: 370 KTDVTSPVTAKAEMTSAVLAAIGLQQIDTCLVSHCPNAFGVALELDKGQKITYSGDTLPC 549
             +++SP   +  + S++L    L++  TCLV HC +AFG AL    G K+ YSGDT+PC
Sbjct: 241 GAEISSPAVER--LISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPC 298

Query: 550 EELVKIGVNSTLLIHEAT 603
           E LV++G ++TLLIHEAT
Sbjct: 299 EALVRMGKDATLLIHEAT 316


>AF304370-1|AAG24441.1|  826|Homo sapiens putative prostate cancer
            susceptibility protein HPC2/ELAC2 protein.
          Length = 826

 Score =  168 bits (409), Expect = 1e-41
 Identities = 86/198 (43%), Positives = 123/198 (62%)
 Frame = +1

Query: 10   AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
            A ++ +  + S+LLDCGEGTFGQL R YG + V+  L TL A+++SHLHADHH GL  +L
Sbjct: 501  ATLVNISPDTSLLLDCGEGTFGQLCRHYGDQ-VDRVLGTLAAVFVSHLHADHHTGLPSIL 559

Query: 190  QARRLALEELSPPGNPEPCYLLAPGQIVTWLNMYDHQFERIKADFTLIPNQNLLYNGGSS 369
              R  AL  L  P +P    ++AP Q+  WL  Y +Q + +    ++IP + L       
Sbjct: 560  LQRERALASLGKPLHP--LLVVAPNQLKAWLQQYHNQCQEVLHHISMIPAKCL-----QE 612

Query: 370  KTDVTSPVTAKAEMTSAVLAAIGLQQIDTCLVSHCPNAFGVALELDKGQKITYSGDTLPC 549
              +++SP   +  + S++L    L++  TCLV HC +AFG AL    G K+ YSGDT+PC
Sbjct: 613  GAEISSPAVER--LISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPC 670

Query: 550  EELVKIGVNSTLLIHEAT 603
            E LV++G ++TLLIHEAT
Sbjct: 671  EALVRMGKDATLLIHEAT 688


>AK001392-1|BAA91666.1|  854|Homo sapiens protein ( Homo sapiens cDNA
            FLJ10530 fis, clone NT2RP2000985. ).
          Length = 854

 Score =  167 bits (407), Expect = 2e-41
 Identities = 86/198 (43%), Positives = 123/198 (62%)
 Frame = +1

Query: 10   AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
            A ++ +  + S+LLDCGEGTFGQL R YG + V+  L TL A+++SHLHADHH GL  +L
Sbjct: 500  ATLVNISPDTSLLLDCGEGTFGQLCRHYGDQ-VDRVLGTLAAVFVSHLHADHHTGLPSIL 558

Query: 190  QARRLALEELSPPGNPEPCYLLAPGQIVTWLNMYDHQFERIKADFTLIPNQNLLYNGGSS 369
              R  AL  L  P +P    ++AP Q+  WL  Y +Q + +    ++IP + L       
Sbjct: 559  LQRERALASLGKPLHP--LLVVAPNQLKAWLQQYYNQCQEVLHHISMIPAKCL-----QE 611

Query: 370  KTDVTSPVTAKAEMTSAVLAAIGLQQIDTCLVSHCPNAFGVALELDKGQKITYSGDTLPC 549
              +++SP   +  + S++L    L++  TCLV HC +AFG AL    G K+ YSGDT+PC
Sbjct: 612  GAEISSPAVER--LISSLLRTCDLEEFQTCLVRHCKHAFGCALVHTSGWKVVYSGDTMPC 669

Query: 550  EELVKIGVNSTLLIHEAT 603
            E LV++G ++TLLIHEAT
Sbjct: 670  EALVRMGKDATLLIHEAT 687


>AK125030-1|BAC86026.1|  501|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43040 fis, clone BRTHA3003074, highly  similar
           to Homo sapiens prostate cancer susceptibility protein.
           ).
          Length = 501

 Score = 70.1 bits (164), Expect = 6e-12
 Identities = 31/59 (52%), Positives = 43/59 (72%)
 Frame = +1

Query: 10  AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGV 186
           A ++ +  + S+LLDCGEGTFGQL R YG  +V+  L TL A+++SHLHADHH   +G+
Sbjct: 407 ATLVNISPDTSLLLDCGEGTFGQLCRHYG-DQVDRVLGTLAAVFVSHLHADHHTVSVGL 464


>AF304369-1|AAG24440.1|   46|Homo sapiens putative prostate cancer
           susceptibility protein HPC2/ELAC2 protein.
          Length = 46

 Score = 65.7 bits (153), Expect = 1e-10
 Identities = 29/43 (67%), Positives = 35/43 (81%)
 Frame = +1

Query: 40  SILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHH 168
           S+LLDCGEGTFGQL R YG  +V+  L TL A+++SHLHADHH
Sbjct: 4   SLLLDCGEGTFGQLCRHYG-DQVDRVLGTLAAVFVSHLHADHH 45


>BC014624-1|AAH14624.1|  363|Homo sapiens elaC homolog 1 (E. coli)
           protein.
          Length = 363

 Score = 39.9 bits (89), Expect = 0.007
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = +1

Query: 10  AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
           A+VL+  E    L DCGEGT  QL++     ++ A    +  I+I+HLH DH  GL G+L
Sbjct: 23  AVVLRC-EGECWLFDCGEGTQTQLMK----SQLKA--GRITKIFITHLHGDHFFGLPGLL 75


>AK223507-1|BAD97227.1|  363|Homo sapiens elaC homolog 1 variant
           protein.
          Length = 363

 Score = 39.9 bits (89), Expect = 0.007
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = +1

Query: 10  AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
           A+VL+  E    L DCGEGT  QL++     ++ A    +  I+I+HLH DH  GL G+L
Sbjct: 23  AVVLRC-EGECWLFDCGEGTQTQLMK----SQLKA--GRITKIFITHLHGDHFFGLPGLL 75


>AK024822-1|BAB15021.1|  363|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21169 fis, clone CAS10938. ).
          Length = 363

 Score = 39.9 bits (89), Expect = 0.007
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = +1

Query: 10  AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
           A+VL+  E    L DCGEGT  QL++     ++ A    +  I+I+HLH DH  GL G+L
Sbjct: 23  AVVLRC-EGECWLFDCGEGTQTQLMK----SQLKA--GRITKIFITHLHGDHFFGLPGLL 75


>AF308695-1|AAG24917.1|  363|Homo sapiens ELAC1 protein.
          Length = 363

 Score = 39.9 bits (89), Expect = 0.007
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = +1

Query: 10  AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
           A+VL+  E    L DCGEGT  QL++     ++ A    +  I+I+HLH DH  GL G+L
Sbjct: 23  AVVLRC-EGECWLFDCGEGTQTQLMK----SQLKA--GRITKIFITHLHGDHFFGLPGLL 75


>AB029151-1|BAA96799.1|  363|Homo sapiens D29 protein.
          Length = 363

 Score = 39.9 bits (89), Expect = 0.007
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = +1

Query: 10  AIVLQVDENRSILLDCGEGTFGQLVRFYGPKKVNAFLRTLKAIYISHLHADHHIGLIGVL 189
           A+VL+  E    L DCGEGT  QL++     ++ A    +  I+I+HLH DH  GL G+L
Sbjct: 23  AVVLRC-EGECWLFDCGEGTQTQLMK----SQLKA--GRITKIFITHLHGDHFFGLPGLL 75


>AY463963-1|AAR25628.1|  267|Homo sapiens Down syndrome critical
           region protein 2 protein.
          Length = 267

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +2

Query: 425 WPPSGCSRSTRAWCRTVPTL----SESHWSWIKARRSPTLETRCPVKN 556
           W   GC++    WCRT  T     +E+   +   + +P++   CP KN
Sbjct: 93  WEEVGCAKLWNEWCRTTDTTHLSSTEAFCVFYHLKSNPSVFGSCPRKN 140


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,765,040
Number of Sequences: 237096
Number of extensions: 2007592
Number of successful extensions: 6649
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6624
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -