Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_N24
(513 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p pro... 241 4e-64
AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-P... 241 4e-64
AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-P... 241 4e-64
AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-P... 203 1e-52
AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p pro... 201 5e-52
BT011391-1|AAR96183.1| 374|Drosophila melanogaster AT28259p pro... 32 0.40
AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA... 31 1.2
AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p pro... 29 3.7
AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA... 29 3.7
DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2 prot... 29 4.9
BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p pro... 29 4.9
AY070966-1|AAL48588.1| 590|Drosophila melanogaster RE06471p pro... 29 4.9
AE014296-2567|AAF49587.1| 590|Drosophila melanogaster CG7297-PA... 29 4.9
AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA... 29 4.9
AB073024-1|BAB69959.1| 1722|Drosophila melanogaster double-stran... 29 4.9
BT025806-1|ABF85706.1| 620|Drosophila melanogaster IP01548p pro... 28 8.5
BT010033-1|AAQ22502.1| 1180|Drosophila melanogaster LP05937p pro... 28 8.5
AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA... 28 8.5
AE014297-1132|AAS65135.1| 1180|Drosophila melanogaster CG11870-P... 28 8.5
AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-P... 28 8.5
AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-P... 28 8.5
AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-P... 28 8.5
>AY070896-1|AAL48518.1| 160|Drosophila melanogaster LP04958p
protein.
Length = 160
Score = 241 bits (590), Expect = 4e-64
Identities = 117/158 (74%), Positives = 131/158 (82%), Gaps = 4/158 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 214 AWRHFYWYLTNEGIEYLRIFPHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 381
AWRH+YWYLTNEGIE LR + HLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 382 EDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRG 495
EDRSAYRRA P G+ DKK DVGPG+ +VEFRGGFGRG
Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGAGEVEFRGGFGRG 157
>AE014298-2882|AAN09507.1| 160|Drosophila melanogaster CG14206-PC,
isoform C protein.
Length = 160
Score = 241 bits (590), Expect = 4e-64
Identities = 117/158 (74%), Positives = 131/158 (82%), Gaps = 4/158 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 214 AWRHFYWYLTNEGIEYLRIFPHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 381
AWRH+YWYLTNEGIE LR + HLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 382 EDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRG 495
EDRSAYRRA P G+ DKK DVGPG+ +VEFRGGFGRG
Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGAGEVEFRGGFGRG 157
>AE014298-2881|AAF48978.2| 160|Drosophila melanogaster CG14206-PB,
isoform B protein.
Length = 160
Score = 241 bits (590), Expect = 4e-64
Identities = 117/158 (74%), Positives = 131/158 (82%), Gaps = 4/158 (2%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
M MPK +RV+IYEYLFKEGV+VAKKD+HA KHP+LE IPNL VIKAMQSL SRG VKEQF
Sbjct: 1 MFMPKAHRVAIYEYLFKEGVIVAKKDFHAQKHPELESIPNLHVIKAMQSLHSRGLVKEQF 60
Query: 214 AWRHFYWYLTNEGIEYLRIFPHLPPEIVPATLKRSVRTETVR-RGAVGRPDAP---ARTA 381
AWRH+YWYLTNEGIE LR + HLPPEIVP+TLKR R+ETVR R AVG P P ++T
Sbjct: 61 AWRHYYWYLTNEGIEELRSYLHLPPEIVPSTLKRPARSETVRPRPAVGGPRGPGDASKTG 120
Query: 382 EDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGRG 495
EDRSAYRRA P G+ DKK DVGPG+ +VEFRGGFGRG
Sbjct: 121 EDRSAYRRA-PGGSGVDKKGDVGPGAGEVEFRGGFGRG 157
>AE014297-4155|AAF56731.1| 163|Drosophila melanogaster CG12275-PA
protein.
Length = 163
Score = 203 bits (495), Expect = 1e-52
Identities = 102/158 (64%), Positives = 118/158 (74%), Gaps = 5/158 (3%)
Frame = +1
Query: 34 MLMPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQF 213
M +PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQF
Sbjct: 1 MFIPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQF 60
Query: 214 AWRHFYWYLTNEGIEYLRIFPHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPART 378
AWRHFYW LTNEGIE LR + HLPPEIVP+TL ++ R+ VR RG G P ++T
Sbjct: 61 AWRHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKT 120
Query: 379 AEDRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGR 492
+DRS YRR P A DKK DVG G+ VE+RGGFGR
Sbjct: 121 DDDRSNYRRGPGAYG-MDKKGDVGAGTGRVEYRGGFGR 157
>AF145693-1|AAD38668.2| 162|Drosophila melanogaster LD32148p
protein.
Length = 162
Score = 201 bits (490), Expect = 5e-52
Identities = 101/156 (64%), Positives = 117/156 (75%), Gaps = 5/156 (3%)
Frame = +1
Query: 40 MPKQNRVSIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAW 219
+PK NRV+IYEYLFKEGV+VAKKD KH +L+KIPNLQVIK MQSL SRG+VKEQFAW
Sbjct: 2 IPKANRVAIYEYLFKEGVLVAKKDSPIQKHSELDKIPNLQVIKVMQSLNSRGWVKEQFAW 61
Query: 220 RHFYWYLTNEGIEYLRIFPHLPPEIVPATLKRSVRTETVR-RGAVGRP----DAPARTAE 384
RHFYW LTNEGIE LR + HLPPEIVP+TL ++ R+ VR RG G P ++T +
Sbjct: 62 RHFYWLLTNEGIEELRRYLHLPPEIVPSTLTQTTRSNAVRPRGGPGGPGGGFGGASKTDD 121
Query: 385 DRSAYRRAPPAGAPHDKKADVGPGSADVEFRGGFGR 492
DRS YRR P A DKK DVG G+ VE+RGGFGR
Sbjct: 122 DRSNYRRGPGAYG-MDKKGDVGAGTGRVEYRGGFGR 156
>BT011391-1|AAR96183.1| 374|Drosophila melanogaster AT28259p
protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.40
Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 5/87 (5%)
Frame = +1
Query: 211 FAWRHFYWYLTNEGIEYLRIFPHLPPEIVPATLKRSVRTETVRRG--AVGRPDAPARTA- 381
F WR FY L E I L P PP + K + + G + G+ A A A
Sbjct: 77 FFWRTFYDKLIEEEITVLEEVPRPPPTVPDKKGKGKKKGDARMAGGKSAGKAGASAGAAG 136
Query: 382 --EDRSAYRRAPPAGAPHDKKADVGPG 456
++ APPAG + +V G
Sbjct: 137 KGRKKAGQDAAPPAGGDQEAVEEVNTG 163
>AE014297-4235|AAF56793.2| 5106|Drosophila melanogaster CG1842-PA
protein.
Length = 5106
Score = 30.7 bits (66), Expect = 1.2
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Frame = +1
Query: 211 FAWRHFYWYLTNEGIEYLRIFPHLPPEIVPATLKRSVRTETVRRG--AVGRPDAPARTA- 381
F WR FY L E I L P PP + K + + G + G+ A A A
Sbjct: 77 FFWRTFYDKLIEEEITVLEEVPRPPPTVPDKKGKGKKKGDARMAGGKSAGKAGASAGAAG 136
Query: 382 --EDRSAYRRAPPAGAPHDKKADVGPG--SADVEFRG 480
++ A PAG + +V G + D E G
Sbjct: 137 KGRKKAGQDAAAPAGGDQEAVEEVNTGGETTDAEVEG 173
>AY118800-1|AAM50660.1| 255|Drosophila melanogaster GH19623p
protein.
Length = 255
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 281 KCGKILRYSIPSFVKYQ*KCLHANCSLTYP 192
KC +++P+F+ + +CL C++ YP
Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105
>AE013599-635|AAF59104.2| 255|Drosophila melanogaster CG30362-PA
protein.
Length = 255
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -2
Query: 281 KCGKILRYSIPSFVKYQ*KCLHANCSLTYP 192
KC +++P+F+ + +CL C++ YP
Sbjct: 76 KCRSDPEFNVPAFIDSRKRCLSDRCAMAYP 105
>DQ228799-1|ABB54752.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228798-1|ABB54751.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228797-1|ABB54750.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228796-1|ABB54749.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228795-1|ABB54748.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228794-1|ABB54747.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228793-1|ABB54746.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>DQ228792-1|ABB54745.1| 1715|Drosophila melanogaster Dicer-2
protein.
Length = 1715
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 772 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 807
>BT011073-1|AAR82738.1| 1640|Drosophila melanogaster SD11113p
protein.
Length = 1640
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 758 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 793
>AY070966-1|AAL48588.1| 590|Drosophila melanogaster RE06471p
protein.
Length = 590
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 145 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFPHLPP 288
+P+L VI + R +K + + F W+L N ++L ++P L P
Sbjct: 396 MPHLTVIPVGNLAEQRD-LKNRLHCKPFKWFLDNLATDFLNLYPILDP 442
>AE014296-2567|AAF49587.1| 590|Drosophila melanogaster CG7297-PA
protein.
Length = 590
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 145 IPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFPHLPP 288
+P+L VI + R +K + + F W+L N ++L ++P L P
Sbjct: 396 MPHLTVIPVGNLAEQRD-LKNRLHCKPFKWFLDNLATDFLNLYPILDP 442
>AE013599-2513|AAF57830.2| 1722|Drosophila melanogaster CG6493-PA
protein.
Length = 1722
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>AB073024-1|BAB69959.1| 1722|Drosophila melanogaster
double-strand-specific ribonucleaseprotein.
Length = 1722
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -1
Query: 237 IPVKMPPCELFLNISSRFK*LHSFDHLEVRDLLEIW 130
+ V P E+ + S + + LH F + RD+L+IW
Sbjct: 779 VRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIW 814
>BT025806-1|ABF85706.1| 620|Drosophila melanogaster IP01548p
protein.
Length = 620
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 IVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADV-GPGSADV 468
+ A L+ SV+ + GA G+P + +D+ A P D K GP D
Sbjct: 319 LAAAALRASVKNVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSKPSAGGPKPGDQ 378
Query: 469 EFRGGFG 489
+ G G
Sbjct: 379 KPTPGAG 385
>BT010033-1|AAQ22502.1| 1180|Drosophila melanogaster LP05937p
protein.
Length = 1180
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 465
T GA G +A A T D + A P+G P D+ ++ G A+
Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53
>AE014297-4482|AAF56970.1| 1275|Drosophila melanogaster CG7875-PA
protein.
Length = 1275
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Frame = +1
Query: 292 IVPATLKRSVRTETVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADV-GPGSADV 468
+ A L+ SV+ + GA G+P + +D+ A P D K GP D
Sbjct: 974 LAAAALRASVKNVDEKSGADGKPGTMGKPTDDKKAGDDKDKQQPPKDSKPSAGGPKPGDQ 1033
Query: 469 EFRGGFG 489
+ G G
Sbjct: 1034 KPTPGAG 1040
>AE014297-1132|AAS65135.1| 1180|Drosophila melanogaster CG11870-PD,
isoform D protein.
Length = 1180
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 465
T GA G +A A T D + A P+G P D+ ++ G A+
Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53
>AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-PC,
isoform C protein.
Length = 1427
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 465
T GA G +A A T D + A P+G P D+ ++ G A+
Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53
>AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-PB,
isoform B protein.
Length = 1427
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 465
T GA G +A A T D + A P+G P D+ ++ G A+
Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53
>AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-PA,
isoform A protein.
Length = 1427
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 331 TVRRGAVGRPDAPARTAEDRSAYRRAPPAGAPHDKKADVGPGSAD 465
T GA G +A A T D + A P+G P D+ ++ G A+
Sbjct: 9 TAPNGAAGGAEAAAPTGLDATGNSLAHPSGIPQDQIDNIMSGIAN 53
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,743,663
Number of Sequences: 53049
Number of extensions: 458007
Number of successful extensions: 1869
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1859
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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