Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0014_N23
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094815-1|AAM11168.1| 1824|Drosophila melanogaster LD31957p pro...    29   4.5  
AE014298-2509|AAF48687.2| 1824|Drosophila melanogaster CG9086-PA...    29   4.5  
AE014134-2824|AAN10983.1|  410|Drosophila melanogaster CG31750-P...    28   7.9  

>AY094815-1|AAM11168.1| 1824|Drosophila melanogaster LD31957p
           protein.
          Length = 1824

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 392 LEMFVQNKKKYRTLHFTGNLSQLLFITITKCE*YRLRYIM 273
           +E F++NK    TLHF+ N++ L F        Y LRY++
Sbjct: 465 IEKFIRNK----TLHFSKNIASLTFFKRANYILYDLRYLL 500


>AE014298-2509|AAF48687.2| 1824|Drosophila melanogaster CG9086-PA
           protein.
          Length = 1824

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -3

Query: 392 LEMFVQNKKKYRTLHFTGNLSQLLFITITKCE*YRLRYIM 273
           +E F++NK    TLHF+ N++ L F        Y LRY++
Sbjct: 465 IEKFIRNK----TLHFSKNIASLTFFKRANYILYDLRYLL 500


>AE014134-2824|AAN10983.1|  410|Drosophila melanogaster CG31750-PA
           protein.
          Length = 410

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 426 QFSILLKPTAILLIFFIESHLCTFFIPLDYYKIFEFYINRINCIYI 563
           + S+LLK  A+L  ++   +LC+  +P+   K   F+ N I  I +
Sbjct: 66  RISLLLKILAMLWDYYFIQYLCSAILPIFSNKSERFFNNLIEAIAV 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,440,481
Number of Sequences: 53049
Number of extensions: 420285
Number of successful extensions: 740
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)