Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_N22
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC028571-1|AAH28571.1| 331|Homo sapiens beta-1,3-N-acetylgalact... 33 0.80
Y15062-1|CAA75346.1| 331|Homo sapiens GalT4 protein protein. 31 2.4
DQ158095-1|AAZ67917.1| 331|Homo sapiens UDP-Gal:betaGlcNAc beta... 31 2.4
CR457170-1|CAG33451.1| 331|Homo sapiens B3GALT3 protein. 31 2.4
BC047618-1|AAH47618.1| 331|Homo sapiens beta-1,3-N-acetylgalact... 31 2.4
AY505347-1|AAS79231.1| 319|Homo sapiens globoside synthase muta... 31 2.4
AY505346-1|AAS79230.1| 331|Homo sapiens globoside synthase muta... 31 2.4
AY505345-1|AAS79229.1| 144|Homo sapiens globoside synthase muta... 31 2.4
AY359049-1|AAQ89408.1| 331|Homo sapiens B3GALT3 protein. 31 2.4
AK022491-1|BAB14055.1| 331|Homo sapiens protein ( Homo sapiens ... 31 2.4
AF494106-1|AAM96012.1| 331|Homo sapiens mutant globoside syntha... 31 2.4
AF494105-1|AAM96011.1| 331|Homo sapiens mutant globoside syntha... 31 2.4
AF494104-1|AAM96010.1| 181|Homo sapiens mutant globoside syntha... 31 2.4
AF154848-1|AAF72106.1| 331|Homo sapiens GALT3 protein protein. 31 2.4
AF132731-1|AAF66442.1| 331|Homo sapiens unknown protein. 31 2.4
AB050856-1|BAB17691.1| 331|Homo sapiens globoside synthase prot... 31 2.4
AB050855-1|BAB17690.1| 331|Homo sapiens globoside synthase prot... 31 2.4
AY505344-1|AAS79228.1| 102|Homo sapiens globoside synthase muta... 29 9.9
>BC028571-1|AAH28571.1| 331|Homo sapiens
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside
blood group) protein.
Length = 331
Score = 32.7 bits (71), Expect = 0.80
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNLFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>Y15062-1|CAA75346.1| 331|Homo sapiens GalT4 protein protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>DQ158095-1|AAZ67917.1| 331|Homo sapiens UDP-Gal:betaGlcNAc beta
1,3-galactosyltransferase, polypeptide 3 protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>CR457170-1|CAG33451.1| 331|Homo sapiens B3GALT3 protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>BC047618-1|AAH47618.1| 331|Homo sapiens
beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside
blood group) protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AY505347-1|AAS79231.1| 319|Homo sapiens globoside synthase mutant
protein.
Length = 319
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AY505346-1|AAS79230.1| 331|Homo sapiens globoside synthase mutant
protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AY505345-1|AAS79229.1| 144|Homo sapiens globoside synthase mutant
protein.
Length = 144
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AY359049-1|AAQ89408.1| 331|Homo sapiens B3GALT3 protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AK022491-1|BAB14055.1| 331|Homo sapiens protein ( Homo sapiens
cDNA FLJ12429 fis, clone MAMMA1003146, highly similar to
Homo sapiens mRNA for GalT3 protein. ).
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AF494106-1|AAM96012.1| 331|Homo sapiens mutant globoside synthase
protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AF494105-1|AAM96011.1| 331|Homo sapiens mutant globoside synthase
protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AF494104-1|AAM96010.1| 181|Homo sapiens mutant globoside synthase
protein.
Length = 181
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AF154848-1|AAF72106.1| 331|Homo sapiens GALT3 protein protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AF132731-1|AAF66442.1| 331|Homo sapiens unknown protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AB050856-1|BAB17691.1| 331|Homo sapiens globoside synthase
protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AB050855-1|BAB17690.1| 331|Homo sapiens globoside synthase
protein.
Length = 331
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/60 (21%), Positives = 38/60 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIKISS*DERFYFIH*ILQSYL 196
+YR F +++S+ + N +++IL T++P+D++ I+++ +++ ++ + +L +L
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIRVTWGEKKSWWGYEVLTFFL 117
>AY505344-1|AAS79228.1| 102|Homo sapiens globoside synthase mutant
protein.
Length = 102
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +2
Query: 17 VYR*V*IFKFQQYSHYYYANFYVIILCTNNPNDIEINSGIK 139
+YR F +++S+ + N +++IL T++P+D++ IK
Sbjct: 58 IYRQDFHFTLREHSNCSHQNPFLVILVTSHPSDVKARQAIK 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,821,760
Number of Sequences: 237096
Number of extensions: 1075595
Number of successful extensions: 5480
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5480
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -