Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0014_N21
(552 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 272 7e-73
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 272 7e-73
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 272 7e-73
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 270 2e-72
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 268 7e-72
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 268 7e-72
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 262 8e-70
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 253 3e-67
U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein. 30 4.7
U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein. 30 4.7
U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3 pro... 30 4.7
BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3 p... 30 4.7
AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3 p... 30 4.7
AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3 p... 30 4.7
AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3 p... 30 4.7
AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C ... 30 4.7
EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia compleme... 29 8.2
EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia compleme... 29 8.2
BC031044-1|AAH31044.2| 312|Homo sapiens DNAJA4 protein protein. 29 8.2
BC021720-1|AAH21720.1| 397|Homo sapiens DnaJ (Hsp40) homolog, s... 29 8.2
AK098079-1|BAC05229.1| 426|Homo sapiens protein ( Homo sapiens ... 29 8.2
AK096616-1|BAC04828.1| 397|Homo sapiens protein ( Homo sapiens ... 29 8.2
AK090898-1|BAC03540.1| 239|Homo sapiens protein ( Homo sapiens ... 29 8.2
AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens ... 29 8.2
AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens ... 29 8.2
AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein. 29 8.2
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 272 bits (666), Expect = 7e-73
Identities = 126/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 270 bits (663), Expect = 2e-72
Identities = 125/164 (76%), Positives = 145/164 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 268 bits (658), Expect = 7e-72
Identities = 126/164 (76%), Positives = 143/164 (87%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTG 164
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 268 bits (658), Expect = 7e-72
Identities = 125/164 (76%), Positives = 144/164 (87%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDIINDVHILKPG 551
V +PA NTGLGPEKTSF QAL I TKIS+GTI+I++DV ++K G
Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTG 164
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 262 bits (641), Expect = 8e-70
Identities = 122/155 (78%), Positives = 138/155 (89%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLPHI+GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDII 524
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 253 bits (620), Expect = 3e-67
Identities = 120/155 (77%), Positives = 137/155 (88%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLS 419
MRKAI+ HLE NPALEKLLP ++GNVGFVFT+ DL ++RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119
Query: 420 VVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDII 524
V +PA NTGLGPEKTSFFQAL I TKIS+GTI+I+
Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
>U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein.
Length = 428
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein.
Length = 429
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 229 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 277
>U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3
protein.
Length = 259
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 134 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 182
>AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C
protein.
Length = 371
Score = 30.3 bits (65), Expect = 4.7
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 171 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 219
>EF567077-1|ABQ63084.1| 1328|Homo sapiens Fanconi anemia
complementation group I protein.
Length = 1328
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 247 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 366
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674
>EF469766-1|ABP88002.1| 1328|Homo sapiens Fanconi anemia
complementation group I isoform 3 protein.
Length = 1328
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 247 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 366
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 636 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 674
>BC031044-1|AAH31044.2| 312|Homo sapiens DNAJA4 protein protein.
Length = 312
Score = 29.5 bits (63), Expect = 8.2
Identities = 29/107 (27%), Positives = 47/107 (43%)
Frame = +3
Query: 201 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 380
RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 170 RGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMP-IY 227
Query: 381 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDI 521
+AP G + +VI L EK +AL P + + T D+
Sbjct: 228 KAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITDDM 274
>BC021720-1|AAH21720.1| 397|Homo sapiens DnaJ (Hsp40) homolog,
subfamily A, member 4 protein.
Length = 397
Score = 29.5 bits (63), Expect = 8.2
Identities = 29/107 (27%), Positives = 47/107 (43%)
Frame = +3
Query: 201 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 380
RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 255 RGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMP-IY 312
Query: 381 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDI 521
+AP G + +VI L EK +AL P + + T D+
Sbjct: 313 KAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITDDM 359
>AK098079-1|BAC05229.1| 426|Homo sapiens protein ( Homo sapiens
cDNA FLJ40760 fis, clone TRACH2002803, highly similar to
Mus musculus mmDNAJA4 mRNA for mmDj4. ).
Length = 426
Score = 29.5 bits (63), Expect = 8.2
Identities = 29/107 (27%), Positives = 47/107 (43%)
Frame = +3
Query: 201 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 380
RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 284 RGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMP-IY 341
Query: 381 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDI 521
+AP G + +VI L EK +AL P + + T D+
Sbjct: 342 KAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITDDM 388
>AK096616-1|BAC04828.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ39297 fis, clone OCBBF2012812, highly similar to
Mus musculus mmDNAJA4 mRNA for mmDj4. ).
Length = 397
Score = 29.5 bits (63), Expect = 8.2
Identities = 29/107 (27%), Positives = 47/107 (43%)
Frame = +3
Query: 201 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 380
RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 255 RGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMP-IY 312
Query: 381 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDI 521
+AP G + +VI L EK +AL P + + T D+
Sbjct: 313 KAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITDDM 359
>AK090898-1|BAC03540.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ33579 fis, clone BRAMY2011767, highly similar to
Mus musculus mmDNAJA4 mRNA for mmDj4. ).
Length = 239
Score = 29.5 bits (63), Expect = 8.2
Identities = 29/107 (27%), Positives = 47/107 (43%)
Frame = +3
Query: 201 RGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDLVDVRDKLLENKV 380
RGH +++ K + +A+ +T L+ + I G V GDL VRD+ +
Sbjct: 97 RGHDLIMKMK-IQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMP-IY 154
Query: 381 QAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISQGTIDI 521
+AP G + +VI L EK +AL P + + T D+
Sbjct: 155 KAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITDDM 201
>AK027564-1|BAB55200.1| 906|Homo sapiens protein ( Homo sapiens
cDNA FLJ14658 fis, clone NT2RP2002549. ).
Length = 906
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 247 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 366
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 274 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 312
>AK001581-1|BAA91770.1| 1084|Homo sapiens protein ( Homo sapiens
cDNA FLJ10719 fis, clone NT2RP3001109. ).
Length = 1084
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 247 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 366
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 457 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 495
>AB058697-1|BAB47423.1| 802|Homo sapiens KIAA1794 protein protein.
Length = 802
Score = 29.5 bits (63), Expect = 8.2
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +1
Query: 247 KPSRTILKQIQLSKNCFLTSREMLALSSPVEILLMCVINC 366
+P +L ++L C LT + ++L P++ LL C+ +C
Sbjct: 110 EPKPDLLPPLKLEA-CILTQGDKISLQEPLDYLLCCIQHC 148
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,431,899
Number of Sequences: 237096
Number of extensions: 2169242
Number of successful extensions: 4585
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4584
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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